RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 C9JQL5 133 aa9.47□□□□□ -0.89
HMGN1-212ENST00000479586 SLC25A20O43772 301 aa9.47□□□□□ -0.89
HMGN1-212ENST00000479586 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
HMGN1-212ENST00000479586 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
HMGN1-212ENST00000479586 K7EMI3 77 aa9.45□□□□□ -0.9
HMGN1-212ENST00000479586 MOBPQ13875 183 aa9.45□□□□□ -0.9
HMGN1-212ENST00000479586 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
HMGN1-212ENST00000479586 ERG28Q9UKR5 140 aa9.44□□□□□ -0.9
HMGN1-212ENST00000479586 ADCYAP1P18509 176 aa9.43□□□□□ -0.9
HMGN1-212ENST00000479586 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
HMGN1-212ENST00000479586 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
HMGN1-212ENST00000479586 LINC00483Q53H64 154 aa9.42□□□□□ -0.9
HMGN1-212ENST00000479586 AKAP14Q86UN6 197 aa9.42□□□□□ -0.9
HMGN1-212ENST00000479586 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
HMGN1-212ENST00000479586 NXT2Q9NPJ8 142 aaKnown RBP9.42□□□□□ -0.9
HMGN1-212ENST00000479586 ERASQ7Z444 233 aa9.41□□□□□ -0.9
HMGN1-212ENST00000479586 ZNF625Q96I27 306 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-212ENST00000479586 G0S2P27469 103 aa9.39□□□□□ -0.91
HMGN1-212ENST00000479586 GAGE2AQ6NT46 116 aa9.39□□□□□ -0.91
HMGN1-212ENST00000479586 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
HMGN1-212ENST00000479586 SSBP3-AS1Q7Z2R9 100 aa9.38□□□□□ -0.91
HMGN1-212ENST00000479586 MRPL18Q9H0U6 180 aaKnown RBP9.38□□□□□ -0.91
HMGN1-212ENST00000479586 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
HMGN1-212ENST00000479586 H3BRM9 83 aa9.37□□□□□ -0.91
HMGN1-212ENST00000479586 COX17Q14061 63 aa9.37□□□□□ -0.91
HMGN1-212ENST00000479586 PRYO14603 147 aa9.36□□□□□ -0.91
HMGN1-212ENST00000479586 SPRR1AP35321 89 aa9.35□□□□□ -0.91
HMGN1-212ENST00000479586 FCGBPQ9Y6R7 5405 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-212ENST00000479586 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
HMGN1-212ENST00000479586 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-212ENST00000479586 ETDCA0A1B0GVM5 59 aa9.33□□□□□ -0.92
HMGN1-212ENST00000479586 PMVKQ15126 192 aa9.33□□□□□ -0.92
HMGN1-212ENST00000479586 COX6B2Q6YFQ2 88 aa9.33□□□□□ -0.92
HMGN1-212ENST00000479586 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
HMGN1-212ENST00000479586 PEA15Q15121 130 aa9.31□□□□□ -0.92
HMGN1-212ENST00000479586 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
HMGN1-212ENST00000479586 NCR3O14931 201 aa9.3□□□□□ -0.92
HMGN1-212ENST00000479586 IGLC3P0DOY3 106 aa9.29□□□□□ -0.92
HMGN1-212ENST00000479586 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-212ENST00000479586 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
HMGN1-212ENST00000479586 LINC00158P58513 81 aa9.28□□□□□ -0.92
HMGN1-212ENST00000479586 KIAA1644Q3SXP7 199 aa9.28□□□□□ -0.92
HMGN1-212ENST00000479586 C9orf153Q5TBE3 101 aa9.27□□□□□ -0.93
HMGN1-212ENST00000479586 B5MCH6 92 aa9.25□□□□□ -0.93
HMGN1-212ENST00000479586 TRBV10-3A0A0K0K1G6 114 aa9.24□□□□□ -0.93
HMGN1-212ENST00000479586 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
HMGN1-212ENST00000479586 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
HMGN1-212ENST00000479586 Q9BRP9 147 aa9.24□□□□□ -0.93
HMGN1-212ENST00000479586 SYNE2Q8WXH0 6885 aaKnown RBP9.24□□□□□ -0.93
HMGN1-212ENST00000479586 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
HMGN1-212ENST00000479586 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
HMGN1-212ENST00000479586 NDUFA6P56556 154 aa9.22□□□□□ -0.93
HMGN1-212ENST00000479586 IGLV6-57P01721 117 aa9.21□□□□□ -0.94
HMGN1-212ENST00000479586 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
HMGN1-212ENST00000479586 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
HMGN1-212ENST00000479586 SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
HMGN1-212ENST00000479586 ANAPC16Q96DE5 110 aa9.19□□□□□ -0.94
HMGN1-212ENST00000479586 C11orf86A6NJI1 115 aa9.18□□□□□ -0.94
HMGN1-212ENST00000479586 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
HMGN1-212ENST00000479586 HRCT1Q6UXD1 115 aa9.18□□□□□ -0.94
HMGN1-212ENST00000479586 LIMD2Q9BT23 127 aa9.18□□□□□ -0.94
HMGN1-212ENST00000479586 TMEM170BQ5T4T1 132 aa9.17□□□□□ -0.94
HMGN1-212ENST00000479586 Q6ZRX8 168 aa9.17□□□□□ -0.94
HMGN1-212ENST00000479586 ATP6V1G1O75348 118 aa9.15□□□□□ -0.94
HMGN1-212ENST00000479586 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
HMGN1-212ENST00000479586 S100A12P80511 92 aa9.15□□□□□ -0.94
HMGN1-212ENST00000479586 FA2HQ7L5A8 372 aa9.15□□□□□ -0.94
HMGN1-212ENST00000479586 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.94
HMGN1-212ENST00000479586 A0A096LNJ9 63 aa9.13□□□□□ -0.95
HMGN1-212ENST00000479586 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
HMGN1-212ENST00000479586 SMCO4Q9NRQ5 59 aa9.13□□□□□ -0.95
HMGN1-212ENST00000479586 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
HMGN1-212ENST00000479586 CFC1P0CG37 223 aa9.12□□□□□ -0.95
HMGN1-212ENST00000479586 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
HMGN1-212ENST00000479586 DDTP30046 118 aa9.11□□□□□ -0.95
HMGN1-212ENST00000479586 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
HMGN1-212ENST00000479586 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
HMGN1-212ENST00000479586 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
HMGN1-212ENST00000479586 Q6Q795 121 aa9.08□□□□□ -0.96
HMGN1-212ENST00000479586 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
HMGN1-212ENST00000479586 JOSD1Q15040 202 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-212ENST00000479586 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
HMGN1-212ENST00000479586 TRBV10-2A0A0K0K1G8 114 aa9.04□□□□□ -0.96
HMGN1-212ENST00000479586 H7C2G1 150 aa9.03□□□□□ -0.96
HMGN1-212ENST00000479586 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
HMGN1-212ENST00000479586 HBDP02042 147 aa9.02□□□□□ -0.97
HMGN1-212ENST00000479586 HERV-K104P63124 156 aa9.02□□□□□ -0.97
HMGN1-212ENST00000479586 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.97
HMGN1-212ENST00000479586 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
HMGN1-212ENST00000479586 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
HMGN1-212ENST00000479586 LOC107984156A0A0G2JMH3 177 aa9□□□□□ -0.97
HMGN1-212ENST00000479586 SPRR1BP22528 89 aa9□□□□□ -0.97
HMGN1-212ENST00000479586 S100A7L2Q5SY68 101 aa9□□□□□ -0.97
HMGN1-212ENST00000479586 ARL17AQ8IVW1 177 aa9□□□□□ -0.97
HMGN1-212ENST00000479586 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
HMGN1-212ENST00000479586 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
HMGN1-212ENST00000479586 C5orf52A6NGY3 159 aa8.99□□□□□ -0.97
HMGN1-212ENST00000479586 LINC00587B1AMM8 73 aa8.99□□□□□ -0.97
HMGN1-212ENST00000479586 LCE2BO14633 110 aa8.98□□□□□ -0.97
HMGN1-212ENST00000479586 ZNF73O43830 326 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms