RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 TMEM223A0PJW6 202 aa6.39□□□□□ -1.39
SP140-210ENST00000479539 SERF1AO75920 110 aa6.39□□□□□ -1.39
SP140-210ENST00000479539 COX17Q14061 63 aa6.39□□□□□ -1.39
SP140-210ENST00000479539 SFTA2Q6UW10 78 aa6.39□□□□□ -1.39
SP140-210ENST00000479539 MRPL55Q7Z7F7 128 aaKnown RBP6.39□□□□□ -1.39
SP140-210ENST00000479539 ZNF625Q96I27 306 aaPredicted RBP6.39□□□□□ -1.39
SP140-210ENST00000479539 ERG28Q9UKR5 140 aa6.39□□□□□ -1.39
SP140-210ENST00000479539 H0Y9J4 135 aa6.38□□□□□ -1.39
SP140-210ENST00000479539 NUPR1O60356 82 aa6.38□□□□□ -1.39
SP140-210ENST00000479539 PFN2P35080 140 aa6.38□□□□□ -1.39
SP140-210ENST00000479539 ZNF861PO60384 105 aa6.37□□□□□ -1.39
SP140-210ENST00000479539 LEPROTL1O95214 131 aa6.37□□□□□ -1.39
SP140-210ENST00000479539 LINC00167Q96N53 147 aa6.37□□□□□ -1.39
SP140-210ENST00000479539 SND1-IT1Q9HBX3 110 aa6.36□□□□□ -1.39
SP140-210ENST00000479539 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
SP140-210ENST00000479539 VPREB1P12018 145 aa6.35□□□□□ -1.39
SP140-210ENST00000479539 HSPB8Q9UJY1 196 aa6.35□□□□□ -1.39
SP140-210ENST00000479539 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
SP140-210ENST00000479539 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.39
SP140-210ENST00000479539 BCE1O60756 84 aa6.34□□□□□ -1.39
SP140-210ENST00000479539 NKAPP1Q8N9T2 125 aa6.34□□□□□ -1.39
SP140-210ENST00000479539 H0Y8G0 127 aa6.33□□□□□ -1.4
SP140-210ENST00000479539 SCO1O75880 301 aa6.33□□□□□ -1.4
SP140-210ENST00000479539 FABP4P15090 132 aa6.33□□□□□ -1.4
SP140-210ENST00000479539 RPL24P83731 157 aaKnown RBP6.33□□□□□ -1.4
SP140-210ENST00000479539 PRR26Q8N8Z3 221 aa6.33□□□□□ -1.4
SP140-210ENST00000479539 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BKO60814 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BJP06899 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BOP23527 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 PLNP26678 52 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BBP33778 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
SP140-210ENST00000479539 LINC00158P58513 81 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BDP58876 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BCP62807 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HERV-K104P63124 156 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST2H2BEQ16778 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.32□□□□□ -1.4
SP140-210ENST00000479539 Q8NDZ9 215 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BHQ93079 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BNQ99877 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 HIST1H2BMQ99879 126 aa6.32□□□□□ -1.4
SP140-210ENST00000479539 KRTAP13-1Q8IUC0 172 aa6.31□□□□□ -1.4
SP140-210ENST00000479539 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
SP140-210ENST00000479539 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
SP140-210ENST00000479539 IGKV2-28A0A075B6P5 120 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 A0A0U1RRA0 63 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 MYMXA0A1B0GTQ4 84 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 LINC00587B1AMM8 73 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 LEPROTO15243 131 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 DPM2O94777 84 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 IGKV2D-28P01615 120 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 SMIM13P0DJ93 91 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 PMCHL2Q9BQD1 86 aa6.3□□□□□ -1.4
SP140-210ENST00000479539 IGKCP01834 107 aa6.29□□□□□ -1.4
SP140-210ENST00000479539 TSPEAR-AS2P59090 65 aa6.29□□□□□ -1.4
SP140-210ENST00000479539 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
SP140-210ENST00000479539 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
SP140-210ENST00000479539 MAP1LC3CQ9BXW4 147 aa6.29□□□□□ -1.4
SP140-210ENST00000479539 LRP2P98164 4655 aa6.28□□□□□ -1.4
SP140-210ENST00000479539 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
SP140-210ENST00000479539 MIR7-3HGQ8N6C7 128 aa6.28□□□□□ -1.4
SP140-210ENST00000479539 SYS1-DBNDD2H3BUS1 97 aa6.27□□□□□ -1.41
SP140-210ENST00000479539 J3QQQ9 107 aa6.27□□□□□ -1.41
SP140-210ENST00000479539 M0R378 163 aa6.27□□□□□ -1.41
SP140-210ENST00000479539 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
SP140-210ENST00000479539 UBE2AP49459 152 aa6.27□□□□□ -1.41
SP140-210ENST00000479539 HERVK_113P61574 105 aa6.27□□□□□ -1.41
SP140-210ENST00000479539 TMEM126AQ9H061 195 aa6.27□□□□□ -1.41
SP140-210ENST00000479539 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
SP140-210ENST00000479539 TMEM238C9JI98 176 aa6.26□□□□□ -1.41
SP140-210ENST00000479539 NMUP48645 174 aa6.26□□□□□ -1.41
SP140-210ENST00000479539 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
SP140-210ENST00000479539 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
SP140-210ENST00000479539 BOD1L2Q8IYS8 172 aa6.26□□□□□ -1.41
SP140-210ENST00000479539 IGKV2D-26A0A0A0MRZ7 120 aa6.24□□□□□ -1.41
SP140-210ENST00000479539 E9PLD3 99 aa6.24□□□□□ -1.41
SP140-210ENST00000479539 LGALS3P17931 250 aaKnown RBP6.24□□□□□ -1.41
SP140-210ENST00000479539 PET117Q6UWS5 81 aa6.24□□□□□ -1.41
SP140-210ENST00000479539 A0A087X002 238 aa6.23□□□□□ -1.41
SP140-210ENST00000479539 CRYGAP11844 174 aa6.23□□□□□ -1.41
SP140-210ENST00000479539 PRLHP81277 87 aa6.23□□□□□ -1.41
SP140-210ENST00000479539 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
SP140-210ENST00000479539 FAM19A1Q7Z5A9 133 aa6.23□□□□□ -1.41
SP140-210ENST00000479539 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
SP140-210ENST00000479539 DAND5Q8N907 189 aa6.22□□□□□ -1.41
SP140-210ENST00000479539 ANAPC11Q9NYG5 84 aa6.22□□□□□ -1.41
SP140-210ENST00000479539 PRYO14603 147 aa6.21□□□□□ -1.42
SP140-210ENST00000479539 NCR3O14931 201 aa6.21□□□□□ -1.42
SP140-210ENST00000479539 C3orf79P0CE67 100 aa6.21□□□□□ -1.42
SP140-210ENST00000479539 SPRR1AP35321 89 aa6.21□□□□□ -1.42
SP140-210ENST00000479539 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
SP140-210ENST00000479539 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
SP140-210ENST00000479539 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
SP140-210ENST00000479539 TRBV10-2A0A0K0K1G8 114 aa6.2□□□□□ -1.42
SP140-210ENST00000479539 KRTAP4-16G5E9R7 235 aaPredicted RBP6.2□□□□□ -1.42
SP140-210ENST00000479539 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
SP140-210ENST00000479539 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
SP140-210ENST00000479539 TYMSOSQ8TAI1 123 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms