RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 H3BQ85 93 aa16.63■□□□□ 0.25
SYNGAP1-206ENST00000479510 HTN3P15516 51 aa16.63■□□□□ 0.25
SYNGAP1-206ENST00000479510 C6orf223Q8N319 242 aa16.63■□□□□ 0.25
SYNGAP1-206ENST00000479510 KLK12Q9UKR0 248 aa16.63■□□□□ 0.25
SYNGAP1-206ENST00000479510 COX7CP15954 63 aa16.62■□□□□ 0.25
SYNGAP1-206ENST00000479510 ENHOQ6UWT2 76 aa16.62■□□□□ 0.25
SYNGAP1-206ENST00000479510 RPL18AQ02543 176 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-206ENST00000479510 C9orf153Q5TBE3 101 aa16.61■□□□□ 0.25
SYNGAP1-206ENST00000479510 LYPD5Q6UWN5 251 aa16.6■□□□□ 0.25
SYNGAP1-206ENST00000479510 IGKV3D-7A0A0C4DH55 119 aa16.6■□□□□ 0.25
SYNGAP1-206ENST00000479510 hADV29S1A0JD25 119 aa16.6■□□□□ 0.25
SYNGAP1-206ENST00000479510 H3BNG1 76 aa16.6■□□□□ 0.25
SYNGAP1-206ENST00000479510 NOTCH2Q04721 2471 aa16.59■□□□□ 0.25
SYNGAP1-206ENST00000479510 C2orf48Q96LS8 159 aa16.57■□□□□ 0.24
SYNGAP1-206ENST00000479510 ZNF561-AS1K7EIQ3 104 aa16.57■□□□□ 0.24
SYNGAP1-206ENST00000479510 NBEAL2Q6ZNJ1 2754 aa16.55■□□□□ 0.24
SYNGAP1-206ENST00000479510 LOC110117498A0A087WWA1 95 aa16.54■□□□□ 0.24
SYNGAP1-206ENST00000479510 C6orf48Q9UBA6 75 aa16.54■□□□□ 0.24
SYNGAP1-206ENST00000479510 CRYGAP11844 174 aa16.53■□□□□ 0.24
SYNGAP1-206ENST00000479510 RBM3P98179 157 aaKnown RBP16.52■□□□□ 0.24
SYNGAP1-206ENST00000479510 TRBV10-3A0A0K0K1G6 114 aa16.51■□□□□ 0.23
SYNGAP1-206ENST00000479510 UBL5Q9BZL1 73 aa16.5■□□□□ 0.23
SYNGAP1-206ENST00000479510 TRBV7-6A0A0J9YX20 115 aa16.49■□□□□ 0.23
SYNGAP1-206ENST00000479510 PDE6GP18545 87 aa16.49■□□□□ 0.23
SYNGAP1-206ENST00000479510 TRAV23DV6A0A075B6W5 121 aa16.49■□□□□ 0.23
SYNGAP1-206ENST00000479510 GHRHP01286 108 aa16.49■□□□□ 0.23
SYNGAP1-206ENST00000479510 Q6ZQT0 140 aa16.49■□□□□ 0.23
SYNGAP1-206ENST00000479510 DIRC1Q969H9 104 aa16.49■□□□□ 0.23
SYNGAP1-206ENST00000479510 VWFP04275 2813 aa16.48■□□□□ 0.23
SYNGAP1-206ENST00000479510 SERP2Q8N6R1 65 aa16.48■□□□□ 0.23
SYNGAP1-206ENST00000479510 USP17L23D6RBM5 183 aa16.47■□□□□ 0.23
SYNGAP1-206ENST00000479510 EGFEM1PQ0D2K5 195 aa16.46■□□□□ 0.23
SYNGAP1-206ENST00000479510 KPRPQ5T749 579 aaPredicted RBP16.45■□□□□ 0.22
SYNGAP1-206ENST00000479510 LAMTOR3Q9UHA4 124 aa16.45■□□□□ 0.22
SYNGAP1-206ENST00000479510 A0A087WVE0 104 aa16.44■□□□□ 0.22
SYNGAP1-206ENST00000479510 KRTAP26-1Q6PEX3 210 aa16.44■□□□□ 0.22
SYNGAP1-206ENST00000479510 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.44■□□□□ 0.22
SYNGAP1-206ENST00000479510 SMIM20Q8N5G0 67 aa16.43■□□□□ 0.22
SYNGAP1-206ENST00000479510 C3orf56Q8N813 242 aa16.43■□□□□ 0.22
SYNGAP1-206ENST00000479510 F8WDY8 70 aa16.42■□□□□ 0.22
SYNGAP1-206ENST00000479510 Q6ZQY7 126 aa16.42■□□□□ 0.22
SYNGAP1-206ENST00000479510 CAMK2N2Q96S95 79 aa16.42■□□□□ 0.22
SYNGAP1-206ENST00000479510 ZNF73O43830 326 aaPredicted RBP16.42■□□□□ 0.22
SYNGAP1-206ENST00000479510 WFDC10BQ8IUB3 73 aa16.42■□□□□ 0.22
SYNGAP1-206ENST00000479510 XAGE1AQ9HD64 81 aa16.42■□□□□ 0.22
SYNGAP1-206ENST00000479510 DSCR8Q96T75 97 aa16.41■□□□□ 0.22
SYNGAP1-206ENST00000479510 OTOGQ6ZRI0 2925 aa16.41■□□□□ 0.22
SYNGAP1-206ENST00000479510 COX7BP24311 80 aa16.41■□□□□ 0.22
SYNGAP1-206ENST00000479510 NSD1Q96L73 2696 aaPredicted RBP16.4■□□□□ 0.22
SYNGAP1-206ENST00000479510 VPREB1P12018 145 aa16.39■□□□□ 0.21
SYNGAP1-206ENST00000479510 ELOF1P60002 83 aaKnown RBP16.39■□□□□ 0.21
SYNGAP1-206ENST00000479510 M0R378 163 aa16.38■□□□□ 0.21
SYNGAP1-206ENST00000479510 NDUFC2-KCTD14E9PQ53 114 aa16.36■□□□□ 0.21
SYNGAP1-206ENST00000479510 HIGD2BQ4VC39 106 aa16.36■□□□□ 0.21
SYNGAP1-206ENST00000479510 C15orf56Q8N910 161 aa16.35■□□□□ 0.21
SYNGAP1-206ENST00000479510 UPK3BQ9BT76 320 aa16.34■□□□□ 0.21
SYNGAP1-206ENST00000479510 BCE1O60756 84 aa16.33■□□□□ 0.21
SYNGAP1-206ENST00000479510 Q6ZTC4 211 aa16.33■□□□□ 0.21
SYNGAP1-206ENST00000479510 Q6ZRU5 148 aa16.33■□□□□ 0.2
SYNGAP1-206ENST00000479510 LINC01556Q5JQF7 62 aa16.32■□□□□ 0.2
SYNGAP1-206ENST00000479510 TENM1Q9UKZ4 2725 aa16.32■□□□□ 0.2
SYNGAP1-206ENST00000479510 C1orf43Q9BWL3 253 aa16.31■□□□□ 0.2
SYNGAP1-206ENST00000479510 RETNQ9HD89 108 aa16.31■□□□□ 0.2
SYNGAP1-206ENST00000479510 TRBV7-4A0A0J9YYF1 115 aa16.31■□□□□ 0.2
SYNGAP1-206ENST00000479510 ESRGQ1W209 222 aa16.31■□□□□ 0.2
SYNGAP1-206ENST00000479510 FAM19A1Q7Z5A9 133 aa16.31■□□□□ 0.2
SYNGAP1-206ENST00000479510 KRTAP10-11P60412 298 aa16.3■□□□□ 0.2
SYNGAP1-206ENST00000479510 OXLD1Q5BKU9 147 aa16.28■□□□□ 0.2
SYNGAP1-206ENST00000479510 TMEM258P61165 79 aa16.28■□□□□ 0.2
SYNGAP1-206ENST00000479510 Q6ZVQ6 151 aa16.28■□□□□ 0.2
SYNGAP1-206ENST00000479510 TEP1Q99973 2627 aaKnown RBP16.27■□□□□ 0.2
SYNGAP1-206ENST00000479510 CXCL6P80162 114 aa16.27■□□□□ 0.2
SYNGAP1-206ENST00000479510 LINC01547P58512 204 aaPredicted RBP16.26■□□□□ 0.19
SYNGAP1-206ENST00000479510 LINC00528Q8N1L1 170 aa16.26■□□□□ 0.19
SYNGAP1-206ENST00000479510 FLNBO75369 2602 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-206ENST00000479510 ATRQ13535 2644 aa16.24■□□□□ 0.19
SYNGAP1-206ENST00000479510 M0R2N4 97 aa16.23■□□□□ 0.19
SYNGAP1-206ENST00000479510 RPS28P62857 69 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-206ENST00000479510 HIVEP1P15822 2718 aa16.22■□□□□ 0.19
SYNGAP1-206ENST00000479510 SYCNQ0VAF6 134 aa16.22■□□□□ 0.19
SYNGAP1-206ENST00000479510 J3KT08 172 aa16.21■□□□□ 0.19
SYNGAP1-206ENST00000479510 DEFB131BA0A096LNP1 70 aa16.2■□□□□ 0.18
SYNGAP1-206ENST00000479510 Q6ZRP5 223 aa16.2■□□□□ 0.18
SYNGAP1-206ENST00000479510 CYSTM1Q9H1C7 97 aa16.2■□□□□ 0.18
SYNGAP1-206ENST00000479510 IGKV2D-24A0A075B6R9 120 aa16.19■□□□□ 0.18
SYNGAP1-206ENST00000479510 HAMPP81172 84 aa16.19■□□□□ 0.18
SYNGAP1-206ENST00000479510 C11orf45Q8TAV5 145 aa16.18■□□□□ 0.18
SYNGAP1-206ENST00000479510 DNAH10OSP0CZ25 163 aa16.18■□□□□ 0.18
SYNGAP1-206ENST00000479510 KCNQ1DNQ9H478 68 aa16.17■□□□□ 0.18
SYNGAP1-206ENST00000479510 TLX1NBP0CAT3 122 aa16.15■□□□□ 0.18
SYNGAP1-206ENST00000479510 TRAV7A0A075B6U4 112 aa16.14■□□□□ 0.17
SYNGAP1-206ENST00000479510 PLA2G2DQ9UNK4 145 aa16.14■□□□□ 0.17
SYNGAP1-206ENST00000479510 NKAPP1Q8N9T2 125 aa16.12■□□□□ 0.17
SYNGAP1-206ENST00000479510 LOC107984640A0A0U1RRK4 108 aa16.1■□□□□ 0.17
SYNGAP1-206ENST00000479510 TRRAPQ9Y4A5 3859 aa16.09■□□□□ 0.17
SYNGAP1-206ENST00000479510 C7orf33Q8WU49 177 aa16.07■□□□□ 0.16
SYNGAP1-206ENST00000479510 DPH3Q96FX2 82 aa16.07■□□□□ 0.16
SYNGAP1-206ENST00000479510 IGLV5-37A0A075B6J1 123 aa16.06■□□□□ 0.16
SYNGAP1-206ENST00000479510 F8P00451 2351 aa16.04■□□□□ 0.16
SYNGAP1-206ENST00000479510 TRAV10A0A0B4J240 114 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms