RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 PFN2P35080 140 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 SNRPEP62304 92 aaKnown RBP5.61□□□□□ -1.51
CMTM1-208ENST00000479381 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
CMTM1-208ENST00000479381 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
CMTM1-208ENST00000479381 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
CMTM1-208ENST00000479381 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
CMTM1-208ENST00000479381 SERF1AO75920 110 aa5.6□□□□□ -1.51
CMTM1-208ENST00000479381 IGLV7-43P04211 117 aa5.6□□□□□ -1.51
CMTM1-208ENST00000479381 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
CMTM1-208ENST00000479381 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
CMTM1-208ENST00000479381 GAGE10A6NGK3 116 aa5.59□□□□□ -1.51
CMTM1-208ENST00000479381 IGLC3P0DOY3 106 aa5.59□□□□□ -1.51
CMTM1-208ENST00000479381 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
CMTM1-208ENST00000479381 C22orf24Q9Y442 160 aa5.59□□□□□ -1.51
CMTM1-208ENST00000479381 IGLV5-45A0A087WSX0 123 aa5.58□□□□□ -1.52
CMTM1-208ENST00000479381 ZNF22P17026 224 aaPredicted RBP5.58□□□□□ -1.52
CMTM1-208ENST00000479381 C21orf62-AS1Q17RA5 79 aa5.58□□□□□ -1.52
CMTM1-208ENST00000479381 MRPL55Q7Z7F7 128 aaKnown RBP5.58□□□□□ -1.52
CMTM1-208ENST00000479381 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
CMTM1-208ENST00000479381 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
CMTM1-208ENST00000479381 NUPR1O60356 82 aa5.57□□□□□ -1.52
CMTM1-208ENST00000479381 IFI27L1Q96BM0 104 aa5.57□□□□□ -1.52
CMTM1-208ENST00000479381 URB1-AS1Q96HZ7 61 aa5.57□□□□□ -1.52
CMTM1-208ENST00000479381 A0A096LNJ9 63 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 A0A0U1RRA0 63 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 C11orf86A6NJI1 115 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 H0Y9J4 135 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 MT1HL1P0DM35 61 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 UBE2AP49459 152 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 LINC00158P58513 81 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 SRSF9Q13242 221 aaKnown RBP eCLIP5.56□□□□□ -1.52
CMTM1-208ENST00000479381 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
CMTM1-208ENST00000479381 FABP4P15090 132 aa5.55□□□□□ -1.52
CMTM1-208ENST00000479381 SFTA2Q6UW10 78 aa5.55□□□□□ -1.52
CMTM1-208ENST00000479381 FAM19A2Q8N3H0 131 aa5.55□□□□□ -1.52
CMTM1-208ENST00000479381 HIST1H2BLQ99880 126 aa5.55□□□□□ -1.52
CMTM1-208ENST00000479381 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
CMTM1-208ENST00000479381 LEPROTL1O95214 131 aa5.54□□□□□ -1.52
CMTM1-208ENST00000479381 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
CMTM1-208ENST00000479381 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
CMTM1-208ENST00000479381 RPL24P83731 157 aaKnown RBP5.54□□□□□ -1.52
CMTM1-208ENST00000479381 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
CMTM1-208ENST00000479381 TP73-AS1Q9UF72 201 aa5.54□□□□□ -1.52
CMTM1-208ENST00000479381 HSPB8Q9UJY1 196 aa5.54□□□□□ -1.52
CMTM1-208ENST00000479381 LOC105371267A0A1B0GV96 52 aa5.53□□□□□ -1.52
CMTM1-208ENST00000479381 AKR1D1P51857 326 aa5.53□□□□□ -1.52
CMTM1-208ENST00000479381 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
CMTM1-208ENST00000479381 PRR26Q8N8Z3 221 aa5.53□□□□□ -1.52
CMTM1-208ENST00000479381 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
CMTM1-208ENST00000479381 TRAV12-1A0A0B4J245 112 aa5.52□□□□□ -1.53
CMTM1-208ENST00000479381 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
CMTM1-208ENST00000479381 ZNF861PO60384 105 aa5.52□□□□□ -1.53
CMTM1-208ENST00000479381 BCE1O60756 84 aa5.52□□□□□ -1.53
CMTM1-208ENST00000479381 HERVK_113P61574 105 aa5.52□□□□□ -1.53
CMTM1-208ENST00000479381 ODF1Q14990 250 aa5.52□□□□□ -1.53
CMTM1-208ENST00000479381 TMEM223A0PJW6 202 aa5.51□□□□□ -1.53
CMTM1-208ENST00000479381 COX17Q14061 63 aa5.51□□□□□ -1.53
CMTM1-208ENST00000479381 FAM19A1Q7Z5A9 133 aa5.51□□□□□ -1.53
CMTM1-208ENST00000479381 MAP1LC3CQ9BXW4 147 aa5.51□□□□□ -1.53
CMTM1-208ENST00000479381 SND1-IT1Q9HBX3 110 aa5.51□□□□□ -1.53
CMTM1-208ENST00000479381 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
CMTM1-208ENST00000479381 C20orf202A1L168 122 aa5.5□□□□□ -1.53
CMTM1-208ENST00000479381 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
CMTM1-208ENST00000479381 KRTDAPP60985 99 aa5.5□□□□□ -1.53
CMTM1-208ENST00000479381 MYMXA0A1B0GTQ4 84 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 LINC00587B1AMM8 73 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 LGALS3P17931 250 aaKnown RBP5.49□□□□□ -1.53
CMTM1-208ENST00000479381 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 S100A12P80511 92 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 MIEN1Q9BRT3 115 aa5.49□□□□□ -1.53
CMTM1-208ENST00000479381 SYS1-DBNDD2H3BUS1 97 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 DPM2O94777 84 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 C3orf79P0CE67 100 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 PLNP26678 52 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 HERV-K104P63124 156 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 PRLHP81277 87 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 JOSD1Q15040 202 aaPredicted RBP5.48□□□□□ -1.53
CMTM1-208ENST00000479381 PMCHL2Q9BQD1 86 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
CMTM1-208ENST00000479381 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 NCR3O14931 201 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 IGKCP01834 107 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 SMIM6P0DI80 62 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 VPREB1P12018 145 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 BOD1L2Q8IYS8 172 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 PLEKHB2Q96CS7 222 aa5.47□□□□□ -1.53
CMTM1-208ENST00000479381 TNXBP22105 4242 aa5.46□□□□□ -1.54
CMTM1-208ENST00000479381 TMEM238C9JI98 176 aa5.46□□□□□ -1.54
CMTM1-208ENST00000479381 CRYGAP11844 174 aa5.46□□□□□ -1.54
CMTM1-208ENST00000479381 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
CMTM1-208ENST00000479381 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
CMTM1-208ENST00000479381 M0R378 163 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms