RNA–Protein interactions for RNA: ENST00000478888.1

GKN1-202, Transcript of gastrokine 1, humanhuman

TSL 2

Gene GKN1, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-202ENST00000478888 CNOT1A5YKK6 2376 aaKnown RBP0.69□□□□□ -2.3
GKN1-202ENST00000478888 URB2Q14146 1524 aaKnown RBP0.69□□□□□ -2.3
GKN1-202ENST00000478888 CFAP43Q8NDM7 1665 aa0.69□□□□□ -2.3
GKN1-202ENST00000478888 CCDC141Q6ZP82 1450 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 LINC00959A0A1B0GUT2 108 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 PDCD5O14737 125 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 CFDP00746 253 aaPredicted RBP0.68□□□□□ -2.3
GKN1-202ENST00000478888 SMIM13P0DJ93 91 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 ATP5EP2Q5VTU8 51 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 WFDC9Q8NEX5 89 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 C18orf32Q8TCD1 76 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 PLCH1Q4KWH8 1693 aa0.68□□□□□ -2.3
GKN1-202ENST00000478888 NCOA2Q15596 1464 aa0.67□□□□□ -2.3
GKN1-202ENST00000478888 FMN2Q9NZ56 1722 aa0.67□□□□□ -2.3
GKN1-202ENST00000478888 NDUFB1O75438 58 aa0.67□□□□□ -2.3
GKN1-202ENST00000478888 GAFA1Q96PS6 74 aa0.67□□□□□ -2.3
GKN1-202ENST00000478888 TULP4Q9NRJ4 1543 aa0.67□□□□□ -2.3
GKN1-202ENST00000478888 ADAMTS12P58397 1594 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 ZNF831Q5JPB2 1677 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 PKDREJQ9NTG1 2253 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 TRAV21A0A0B4J279 112 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 UMAD1C9J7I0 102 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 DEFB121Q5J5C9 76 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 Q8IZM0 81 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 POLQO75417 2590 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 ITSN1Q15811 1721 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 DOT1LQ8TEK3 1739 aa0.66□□□□□ -2.3
GKN1-202ENST00000478888 CEP170BQ9Y4F5 1589 aaPredicted RBP0.66□□□□□ -2.3
GKN1-202ENST00000478888 CLIP1P30622 1438 aa0.65□□□□□ -2.3
GKN1-202ENST00000478888 MROH1Q8NDA8 1641 aa0.65□□□□□ -2.31
GKN1-202ENST00000478888 SPTY2D1-AS1A0A0U1RR47 76 aa0.65□□□□□ -2.31
GKN1-202ENST00000478888 I3L2K1 104 aa0.65□□□□□ -2.31
GKN1-202ENST00000478888 IFI27P40305 119 aaPredicted RBP0.65□□□□□ -2.31
GKN1-202ENST00000478888 RPL38P63173 70 aaKnown RBP0.65□□□□□ -2.31
GKN1-202ENST00000478888 USMG5Q96IX5 58 aa0.65□□□□□ -2.31
GKN1-202ENST00000478888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.31
GKN1-202ENST00000478888 SLIT1O75093 1534 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 ERICH3Q5RHP9 1530 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 MAGI3Q5TCQ9 1506 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 DUOX2Q9NRD8 1548 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 ABCA12Q86UK0 2595 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 BIVM-ERCC5R4GMW8 1640 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 COX7BP24311 80 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 CRIPTQ9P021 101 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 RICTORQ6R327 1708 aa0.64□□□□□ -2.31
GKN1-202ENST00000478888 PARP4Q9UKK3 1724 aaKnown RBP0.64□□□□□ -2.31
GKN1-202ENST00000478888 WIZO95785 1651 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 ZNF292O60281 2723 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 GVINP1Q7Z2Y8 2422 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 AKAP6Q13023 2319 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 SMIM31A0A1B0GVY4 71 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 H3BVH4 76 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 I3L3M4 83 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 COX8AP10176 69 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 IGF2RP11717 2491 aa0.63□□□□□ -2.31
GKN1-202ENST00000478888 DDX60LQ5H9U9 1706 aaKnown RBP0.63□□□□□ -2.31
GKN1-202ENST00000478888 PIEZO2Q9H5I5 2752 aa0.62□□□□□ -2.31
GKN1-202ENST00000478888 IFI6P09912 130 aa0.62□□□□□ -2.31
GKN1-202ENST00000478888 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
GKN1-202ENST00000478888 DEFB123Q8N688 67 aa0.62□□□□□ -2.31
GKN1-202ENST00000478888 USP32Q8NFA0 1604 aa0.62□□□□□ -2.31
GKN1-202ENST00000478888 CICQ96RK0 1608 aaPredicted RBP0.62□□□□□ -2.31
GKN1-202ENST00000478888 TPRP12270 2363 aaKnown RBP0.62□□□□□ -2.31
GKN1-202ENST00000478888 PREX1Q8TCU6 1659 aa0.62□□□□□ -2.31
GKN1-202ENST00000478888 NRAPQ86VF7 1730 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 BDP1A6H8Y1 2624 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 ABCA9Q8IUA7 1624 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 CCDC180Q9P1Z9 1646 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 K7EQZ3 153 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 COX6B1P14854 86 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 NREPQ16612 68 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 HEPN1Q6WQI6 88 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 GNG13Q9P2W3 67 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 INO80Q9ULG1 1556 aaPredicted RBP0.61□□□□□ -2.31
GKN1-202ENST00000478888 PIEZO1Q92508 2521 aa0.61□□□□□ -2.31
GKN1-202ENST00000478888 NESP48681 1621 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 MADDQ8WXG6 1647 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 EIF2AK4Q9P2K8 1649 aaKnown RBP0.6□□□□□ -2.31
GKN1-202ENST00000478888 EFCAB5A4FU69 1503 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 LMTK2Q8IWU2 1503 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 TNRC6CQ9HCJ0 1690 aaKnown RBP0.6□□□□□ -2.31
GKN1-202ENST00000478888 FXYD6Q9H0Q3 95 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 HILPDAQ9Y5L2 63 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 NWD1Q149M9 1564 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 KNL1Q8NG31 2342 aa0.6□□□□□ -2.31
GKN1-202ENST00000478888 NCOR1O75376 2440 aa0.59□□□□□ -2.31
GKN1-202ENST00000478888 NHSQ6T4R5 1651 aa0.59□□□□□ -2.31
GKN1-202ENST00000478888 CDC42BPGQ6DT37 1551 aa0.59□□□□□ -2.31
GKN1-202ENST00000478888 CPSF4LA6NMK7 179 aaKnown RBP0.59□□□□□ -2.31
GKN1-202ENST00000478888 Q5BKY6 102 aa0.59□□□□□ -2.31
GKN1-202ENST00000478888 ASXL1Q8IXJ9 1541 aa0.59□□□□□ -2.32
GKN1-202ENST00000478888 SPTA1P02549 2419 aa0.58□□□□□ -2.32
GKN1-202ENST00000478888 CSPG4Q6UVK1 2322 aa0.58□□□□□ -2.32
GKN1-202ENST00000478888 Q5VSD8 79 aa0.58□□□□□ -2.32
GKN1-202ENST00000478888 MRPL34Q9BQ48 92 aaKnown RBP0.58□□□□□ -2.32
GKN1-202ENST00000478888 CD163L1Q9NR16 1453 aa0.58□□□□□ -2.32
GKN1-202ENST00000478888 TJP1Q07157 1748 aa0.58□□□□□ -2.32
GKN1-202ENST00000478888 ANKRD50Q9ULJ7 1429 aa0.57□□□□□ -2.32
GKN1-202ENST00000478888 CELSR2Q9HCU4 2923 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms