RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 NIT1Q86X76 327 aa3.4□□□□□ -1.87
SSR3-207ENST00000478842 CHCHD1Q96BP2 118 aaKnown RBP3.4□□□□□ -1.87
SSR3-207ENST00000478842 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
SSR3-207ENST00000478842 TNXBP22105 4242 aa3.4□□□□□ -1.87
SSR3-207ENST00000478842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
SSR3-207ENST00000478842 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
SSR3-207ENST00000478842 IGIPA6NJ69 53 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 C1orf196B1AJZ1 125 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
SSR3-207ENST00000478842 MPV17L2Q567V2 206 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 TOMM6Q96B49 74 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 TIMM17AQ99595 171 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 TMEM243Q9BU79 118 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
SSR3-207ENST00000478842 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 TRBV25-1A0A075B6N4 114 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 A0A0U1RQV1 116 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 LINC00614P0C842 121 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 FGF6P10767 208 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 FCER1GP30273 86 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 RAB5BP61020 215 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 RBX1P62877 108 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
SSR3-207ENST00000478842 SYCNQ0VAF6 134 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 PMCHL1Q16048 86 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 Q6ZUT4 128 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 FA2HQ7L5A8 372 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 PACRGQ96M98 296 aaPredicted RBP3.38□□□□□ -1.87
SSR3-207ENST00000478842 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
SSR3-207ENST00000478842 A0A0J9YXV3 536 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 HBDP02042 147 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 ZNF25P17030 456 aaPredicted RBP3.37□□□□□ -1.87
SSR3-207ENST00000478842 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 C5orf47Q569G3 176 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 BAGE3Q86Y29 109 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 HIST3H2BBQ8N257 126 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 C9orf163Q8N9P6 203 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 AMELXQ99217 191 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 CYSLTR1Q9Y271 337 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 MUC2Q02817 5179 aa3.37□□□□□ -1.87
SSR3-207ENST00000478842 PKIAP61925 76 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 CIRBPQ14011 172 aaKnown RBP3.36□□□□□ -1.87
SSR3-207ENST00000478842 Q5W150 140 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 FAM19A2Q8N3H0 131 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 HIST1H2BLQ99880 126 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
SSR3-207ENST00000478842 LINC01549A6NIU2 74 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 BPY2O14599 106 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 HSBP1O75506 76 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 UBE2D1P51668 147 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 NDUFA6P56556 154 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 SDIM1Q6ZPB5 146 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
SSR3-207ENST00000478842 UBE2L6O14933 153 aa3.34□□□□□ -1.87
SSR3-207ENST00000478842 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
SSR3-207ENST00000478842 ZNF664Q8N3J9 261 aa3.34□□□□□ -1.87
SSR3-207ENST00000478842 OR5A1Q8NGJ0 315 aa3.34□□□□□ -1.87
SSR3-207ENST00000478842 TRAV12-1A0A0B4J245 112 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 LINC00959A0A1B0GUT2 108 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 IGLC3P0DOY3 106 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 G0S2P27469 103 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 PFN2P35080 140 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 MIAQ16674 131 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 CLPSL2Q6UWE3 100 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 SPINK6Q6UWN8 80 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 LINC00269Q8N2A0 174 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 IFI27L1Q96BM0 104 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 SCGB3A1Q96QR1 104 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 CST9LQ9H4G1 147 aa3.33□□□□□ -1.88
SSR3-207ENST00000478842 A0A087WX48 190 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 C11orf86A6NJI1 115 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.32□□□□□ -1.88
SSR3-207ENST00000478842 SYS1-DBNDD2H3BUS1 97 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 ANGP03950 147 aaKnown RBP3.32□□□□□ -1.88
SSR3-207ENST00000478842 C3orf79P0CE67 100 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 CNBPP62633 177 aaKnown RBP3.32□□□□□ -1.88
SSR3-207ENST00000478842 SMAGPQ0VAQ4 97 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 PMVKQ15126 192 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 AMMECR1LQ6DCA0 310 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 UBE2WQ96B02 151 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 DPH3Q96FX2 82 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 HSPB8Q9UJY1 196 aa3.32□□□□□ -1.88
SSR3-207ENST00000478842 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 TRAV8-4A0A0B4J246 113 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 TINCRA0A1B0GVN0 87 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 TMEM262E9PQX1 116 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 F8VRH5 84 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 S100A6P06703 90 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 FABP4P15090 132 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 ZNF22P17026 224 aaPredicted RBP3.31□□□□□ -1.88
SSR3-207ENST00000478842 COX6A2Q02221 97 aa3.31□□□□□ -1.88
SSR3-207ENST00000478842 SPACA4Q8TDM5 124 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms