RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PFN2P35080 140 aa11.23□□□□□ -0.61
SREBF1-212ENST00000478616 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
SREBF1-212ENST00000478616 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
SREBF1-212ENST00000478616 LPAP08519 4548 aa11.23□□□□□ -0.61
SREBF1-212ENST00000478616 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
SREBF1-212ENST00000478616 VPREB1P12018 145 aa11.22□□□□□ -0.61
SREBF1-212ENST00000478616 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
SREBF1-212ENST00000478616 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
SREBF1-212ENST00000478616 H0Y8G0 127 aa11.2□□□□□ -0.62
SREBF1-212ENST00000478616 BCE1O60756 84 aa11.19□□□□□ -0.62
SREBF1-212ENST00000478616 COX17Q14061 63 aa11.17□□□□□ -0.62
SREBF1-212ENST00000478616 MAP1LC3CQ9BXW4 147 aa11.17□□□□□ -0.62
SREBF1-212ENST00000478616 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
SREBF1-212ENST00000478616 S100A6P06703 90 aa11.15□□□□□ -0.62
SREBF1-212ENST00000478616 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.62
SREBF1-212ENST00000478616 IGLV1-50A0A075B6I6 118 aa11.14□□□□□ -0.63
SREBF1-212ENST00000478616 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
SREBF1-212ENST00000478616 IGKV2-28A0A075B6P5 120 aa11.13□□□□□ -0.63
SREBF1-212ENST00000478616 A0A087X002 238 aa11.13□□□□□ -0.63
SREBF1-212ENST00000478616 IGKV2D-28P01615 120 aa11.13□□□□□ -0.63
SREBF1-212ENST00000478616 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
SREBF1-212ENST00000478616 PMCHL2Q9BQD1 86 aa11.13□□□□□ -0.63
SREBF1-212ENST00000478616 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
SREBF1-212ENST00000478616 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
SREBF1-212ENST00000478616 C3orf79P0CE67 100 aa11.12□□□□□ -0.63
SREBF1-212ENST00000478616 SMIM13P0DJ93 91 aa11.11□□□□□ -0.63
SREBF1-212ENST00000478616 DPM2O94777 84 aa11.1□□□□□ -0.63
SREBF1-212ENST00000478616 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
SREBF1-212ENST00000478616 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
SREBF1-212ENST00000478616 PET117Q6UWS5 81 aa11.1□□□□□ -0.63
SREBF1-212ENST00000478616 HIST1H2BLQ99880 126 aa11.1□□□□□ -0.63
SREBF1-212ENST00000478616 M0R378 163 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 IGKCP01834 107 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 PLNP26678 52 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 S100A2P29034 98 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 RPL28P46779 137 aaKnown RBP11.09□□□□□ -0.63
SREBF1-212ENST00000478616 KRTDAPP60985 99 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
SREBF1-212ENST00000478616 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
SREBF1-212ENST00000478616 LINC00158P58513 81 aa11.08□□□□□ -0.64
SREBF1-212ENST00000478616 TMEM126AQ9H061 195 aa11.08□□□□□ -0.64
SREBF1-212ENST00000478616 PRLHP81277 87 aa11.07□□□□□ -0.64
SREBF1-212ENST00000478616 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
SREBF1-212ENST00000478616 RNF213Q63HN8 5207 aa11.06□□□□□ -0.64
SREBF1-212ENST00000478616 KRTAP13-2Q52LG2 175 aa11.06□□□□□ -0.64
SREBF1-212ENST00000478616 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
SREBF1-212ENST00000478616 MIR7-3HGQ8N6C7 128 aa11.05□□□□□ -0.64
SREBF1-212ENST00000478616 LEPROTO15243 131 aa11.04□□□□□ -0.64
SREBF1-212ENST00000478616 RPL13AP40429 203 aaKnown RBP11.02□□□□□ -0.65
SREBF1-212ENST00000478616 HERV-K104P63124 156 aa11.02□□□□□ -0.65
SREBF1-212ENST00000478616 C20orf202A1L168 122 aa11.01□□□□□ -0.65
SREBF1-212ENST00000478616 UBE2AP49459 152 aa11.01□□□□□ -0.65
SREBF1-212ENST00000478616 HERVK_113P61574 105 aa11.01□□□□□ -0.65
SREBF1-212ENST00000478616 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
SREBF1-212ENST00000478616 DAND5Q8N907 189 aa11.01□□□□□ -0.65
SREBF1-212ENST00000478616 TMA7Q9Y2S6 64 aaKnown RBP11.01□□□□□ -0.65
SREBF1-212ENST00000478616 J3QQQ9 107 aa11□□□□□ -0.65
SREBF1-212ENST00000478616 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
SREBF1-212ENST00000478616 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
SREBF1-212ENST00000478616 LOC107984156A0A0G2JMH3 177 aa10.99□□□□□ -0.65
SREBF1-212ENST00000478616 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
SREBF1-212ENST00000478616 KRTAP4-16G5E9R7 235 aaPredicted RBP10.99□□□□□ -0.65
SREBF1-212ENST00000478616 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
SREBF1-212ENST00000478616 ARL17AQ8IVW1 177 aa10.99□□□□□ -0.65
SREBF1-212ENST00000478616 SPRR1AP35321 89 aa10.98□□□□□ -0.65
SREBF1-212ENST00000478616 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
SREBF1-212ENST00000478616 NCR3O14931 201 aa10.97□□□□□ -0.65
SREBF1-212ENST00000478616 E9PLD3 99 aa10.96□□□□□ -0.65
SREBF1-212ENST00000478616 CRYGAP11844 174 aa10.96□□□□□ -0.65
SREBF1-212ENST00000478616 SOSTDC1Q6X4U4 206 aa10.96□□□□□ -0.65
SREBF1-212ENST00000478616 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
SREBF1-212ENST00000478616 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
SREBF1-212ENST00000478616 KCNQ1DNQ9H478 68 aa10.95□□□□□ -0.66
SREBF1-212ENST00000478616 TRBV10-3A0A0K0K1G6 114 aa10.94□□□□□ -0.66
SREBF1-212ENST00000478616 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
SREBF1-212ENST00000478616 AKR1D1P51857 326 aa10.93□□□□□ -0.66
SREBF1-212ENST00000478616 TYMSOSQ8TAI1 123 aa10.93□□□□□ -0.66
SREBF1-212ENST00000478616 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
SREBF1-212ENST00000478616 A0A0J9YXY3 114 aa10.92□□□□□ -0.66
SREBF1-212ENST00000478616 PRYO14603 147 aa10.92□□□□□ -0.66
SREBF1-212ENST00000478616 LGALS3P17931 250 aaKnown RBP10.92□□□□□ -0.66
SREBF1-212ENST00000478616 LINC00587B1AMM8 73 aa10.91□□□□□ -0.66
SREBF1-212ENST00000478616 TSPAN13O95857 204 aa10.91□□□□□ -0.66
SREBF1-212ENST00000478616 NMUP48645 174 aa10.91□□□□□ -0.66
SREBF1-212ENST00000478616 ANKRD39Q53RE8 183 aa10.91□□□□□ -0.66
SREBF1-212ENST00000478616 C3orf22Q8N5N4 141 aa10.91□□□□□ -0.66
SREBF1-212ENST00000478616 LITAFQ99732 161 aa10.91□□□□□ -0.66
SREBF1-212ENST00000478616 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
SREBF1-212ENST00000478616 SPRR4Q96PI1 79 aa10.9□□□□□ -0.66
SREBF1-212ENST00000478616 HIGD2AQ9BW72 106 aa10.9□□□□□ -0.66
SREBF1-212ENST00000478616 SCGB1D1O95968 90 aa10.89□□□□□ -0.67
SREBF1-212ENST00000478616 SMCR5Q8TEV8 140 aa10.89□□□□□ -0.67
SREBF1-212ENST00000478616 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
SREBF1-212ENST00000478616 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
SREBF1-212ENST00000478616 B5MCH6 92 aa10.85□□□□□ -0.67
SREBF1-212ENST00000478616 ERC2-IT1O76042 136 aa10.85□□□□□ -0.67
SREBF1-212ENST00000478616 IGLV6-57P01721 117 aa10.85□□□□□ -0.67
SREBF1-212ENST00000478616 NPC2P61916 151 aa10.85□□□□□ -0.67
SREBF1-212ENST00000478616 NDUFC2O95298 119 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms