RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
CYTH3-206ENST00000478541 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
CYTH3-206ENST00000478541 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
CYTH3-206ENST00000478541 IGLV1-50A0A075B6I6 118 aa9.63□□□□□ -0.87
CYTH3-206ENST00000478541 BCE1O60756 84 aa9.63□□□□□ -0.87
CYTH3-206ENST00000478541 PRR26Q8N8Z3 221 aa9.63□□□□□ -0.87
CYTH3-206ENST00000478541 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
CYTH3-206ENST00000478541 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
CYTH3-206ENST00000478541 MAP1LC3CQ9BXW4 147 aa9.62□□□□□ -0.87
CYTH3-206ENST00000478541 PMCHL2Q9BQD1 86 aa9.61□□□□□ -0.87
CYTH3-206ENST00000478541 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
CYTH3-206ENST00000478541 VPREB1P12018 145 aa9.6□□□□□ -0.87
CYTH3-206ENST00000478541 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
CYTH3-206ENST00000478541 SYS1-DBNDD2H3BUS1 97 aa9.59□□□□□ -0.87
CYTH3-206ENST00000478541 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
CYTH3-206ENST00000478541 LRP2P98164 4655 aa9.59□□□□□ -0.87
CYTH3-206ENST00000478541 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
CYTH3-206ENST00000478541 DPM2O94777 84 aa9.57□□□□□ -0.88
CYTH3-206ENST00000478541 C3orf79P0CE67 100 aa9.57□□□□□ -0.88
CYTH3-206ENST00000478541 IGKV2-28A0A075B6P5 120 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 IGKV2D-28P01615 120 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 IGKCP01834 107 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 PLNP26678 52 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 LINC00158P58513 81 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 KRTAP13-1Q8IUC0 172 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 HIST3H2BBQ8N257 126 aa9.56□□□□□ -0.88
CYTH3-206ENST00000478541 S100A6P06703 90 aa9.55□□□□□ -0.88
CYTH3-206ENST00000478541 HERV-K104P63124 156 aa9.55□□□□□ -0.88
CYTH3-206ENST00000478541 LINC01545Q5VT33 79 aa9.55□□□□□ -0.88
CYTH3-206ENST00000478541 PET117Q6UWS5 81 aa9.55□□□□□ -0.88
CYTH3-206ENST00000478541 Q8NDZ9 215 aa9.55□□□□□ -0.88
CYTH3-206ENST00000478541 KRTDAPP60985 99 aa9.54□□□□□ -0.88
CYTH3-206ENST00000478541 LINC00587B1AMM8 73 aa9.53□□□□□ -0.88
CYTH3-206ENST00000478541 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 S100A2P29034 98 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 UBE2AP49459 152 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
CYTH3-206ENST00000478541 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
CYTH3-206ENST00000478541 LEPROTO15243 131 aa9.51□□□□□ -0.89
CYTH3-206ENST00000478541 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
CYTH3-206ENST00000478541 HERVK_113P61574 105 aa9.51□□□□□ -0.89
CYTH3-206ENST00000478541 SNRPEP62304 92 aaKnown RBP9.51□□□□□ -0.89
CYTH3-206ENST00000478541 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
CYTH3-206ENST00000478541 M0R378 163 aa9.5□□□□□ -0.89
CYTH3-206ENST00000478541 MIR7-3HGQ8N6C7 128 aa9.5□□□□□ -0.89
CYTH3-206ENST00000478541 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
CYTH3-206ENST00000478541 TMEM238C9JI98 176 aa9.49□□□□□ -0.89
CYTH3-206ENST00000478541 A0A087X002 238 aa9.48□□□□□ -0.89
CYTH3-206ENST00000478541 C5orf52A6NGY3 159 aa9.48□□□□□ -0.89
CYTH3-206ENST00000478541 FAM19A1Q7Z5A9 133 aa9.48□□□□□ -0.89
CYTH3-206ENST00000478541 C20orf202A1L168 122 aa9.47□□□□□ -0.89
CYTH3-206ENST00000478541 J3QQQ9 107 aa9.47□□□□□ -0.89
CYTH3-206ENST00000478541 CRYGAP11844 174 aa9.47□□□□□ -0.89
CYTH3-206ENST00000478541 NMUP48645 174 aa9.47□□□□□ -0.89
CYTH3-206ENST00000478541 PRLHP81277 87 aa9.47□□□□□ -0.89
CYTH3-206ENST00000478541 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
CYTH3-206ENST00000478541 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.9
CYTH3-206ENST00000478541 E9PLD3 99 aa9.46□□□□□ -0.9
CYTH3-206ENST00000478541 LOC107984156A0A0G2JMH3 177 aa9.45□□□□□ -0.9
CYTH3-206ENST00000478541 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
CYTH3-206ENST00000478541 ARL17AQ8IVW1 177 aa9.45□□□□□ -0.9
CYTH3-206ENST00000478541 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
CYTH3-206ENST00000478541 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
CYTH3-206ENST00000478541 LPAP08519 4548 aa9.43□□□□□ -0.9
CYTH3-206ENST00000478541 PRYO14603 147 aa9.43□□□□□ -0.9
CYTH3-206ENST00000478541 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
CYTH3-206ENST00000478541 ANAPC11Q9NYG5 84 aa9.42□□□□□ -0.9
CYTH3-206ENST00000478541 NCR3O14931 201 aa9.41□□□□□ -0.9
CYTH3-206ENST00000478541 SPRR1AP35321 89 aa9.41□□□□□ -0.9
CYTH3-206ENST00000478541 KRTAP13-2Q52LG2 175 aa9.41□□□□□ -0.9
CYTH3-206ENST00000478541 KCNQ1DNQ9H478 68 aa9.41□□□□□ -0.9
CYTH3-206ENST00000478541 RNF213Q63HN8 5207 aa9.4□□□□□ -0.9
CYTH3-206ENST00000478541 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
CYTH3-206ENST00000478541 LINC00337Q8N6G1 96 aa9.4□□□□□ -0.9
CYTH3-206ENST00000478541 DAND5Q8N907 189 aa9.4□□□□□ -0.9
CYTH3-206ENST00000478541 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
CYTH3-206ENST00000478541 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
CYTH3-206ENST00000478541 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
CYTH3-206ENST00000478541 TRBV10-3A0A0K0K1G6 114 aa9.38□□□□□ -0.91
CYTH3-206ENST00000478541 KRTAP4-16G5E9R7 235 aaPredicted RBP9.38□□□□□ -0.91
CYTH3-206ENST00000478541 AKR1D1P51857 326 aa9.38□□□□□ -0.91
CYTH3-206ENST00000478541 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
CYTH3-206ENST00000478541 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
CYTH3-206ENST00000478541 NDUFC2O95298 119 aa9.37□□□□□ -0.91
CYTH3-206ENST00000478541 MIEN1Q9BRT3 115 aa9.37□□□□□ -0.91
CYTH3-206ENST00000478541 S100A12P80511 92 aa9.36□□□□□ -0.91
CYTH3-206ENST00000478541 ZNF815PA8K554 130 aa9.35□□□□□ -0.91
CYTH3-206ENST00000478541 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
CYTH3-206ENST00000478541 SPANXB1Q9NS25 103 aaPredicted RBP9.35□□□□□ -0.91
CYTH3-206ENST00000478541 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
CYTH3-206ENST00000478541 TSPAN13O95857 204 aa9.34□□□□□ -0.91
CYTH3-206ENST00000478541 SCGB1D1O95968 90 aa9.34□□□□□ -0.91
CYTH3-206ENST00000478541 DDTP30046 118 aa9.34□□□□□ -0.91
CYTH3-206ENST00000478541 ADAMTSL4-AS1Q5T5F5 129 aa9.34□□□□□ -0.91
CYTH3-206ENST00000478541 ZNF706Q9Y5V0 76 aaPredicted RBP9.34□□□□□ -0.91
CYTH3-206ENST00000478541 CTAG1AP78358 180 aa9.33□□□□□ -0.92
CYTH3-206ENST00000478541 PRR4Q16378 134 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms