RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 KRTAP10-4P60372 401 aaPredicted RBP2.51□□□□□ -2.01
RPS27A-208ENST00000478196 RAB5BP61020 215 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 HIST1H2BCP62807 126 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 HIST2H2BEQ16778 126 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.51□□□□□ -2.01
RPS27A-208ENST00000478196 Q6ZRU5 148 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 LINC01561Q8N1V8 128 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 FAM19A2Q8N3H0 131 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 OR10D4PQ8NGN7 298 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 HIST1H2BHQ93079 126 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 C2orf48Q96LS8 159 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 HIST1H2BNQ99877 126 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 HIST1H2BMQ99879 126 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 CHAC1Q9BUX1 264 aa2.51□□□□□ -2.01
RPS27A-208ENST00000478196 A0A096LNI7 61 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.5□□□□□ -2.01
RPS27A-208ENST00000478196 SMR3BP02814 79 aaPredicted RBP2.5□□□□□ -2.01
RPS27A-208ENST00000478196 IGLC3P0DOY3 106 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 HERVK_113P63121 156 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 SPAG11BQ08648 103 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 SYCNQ0VAF6 134 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 PMVKQ15126 192 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 COA6Q5JTJ3 125 aaKnown RBP2.5□□□□□ -2.01
RPS27A-208ENST00000478196 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 UNQ6190/PRO20217Q6UXQ8 127 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 Q6ZN92 141 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 BAGE3Q86Y29 109 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 CIRBP-AS1Q8TBR5 109 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 SPACA4Q8TDM5 124 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 ORAOV1Q8WV07 137 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 C2orf88Q9BSF0 95 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 C6orf48Q9UBA6 75 aa2.5□□□□□ -2.01
RPS27A-208ENST00000478196 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.49□□□□□ -2.01
RPS27A-208ENST00000478196 TRAV12-1A0A0B4J245 112 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 C11orf86A6NJI1 115 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 F8WDY8 70 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 ATP5LO75964 103 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 APOMO95445 188 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 ZNF22P17026 224 aaPredicted RBP2.49□□□□□ -2.01
RPS27A-208ENST00000478196 S100A1P23297 94 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 Q8IZM0 81 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 LINC00469Q8N7U9 141 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 IFI27L1Q96BM0 104 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 CARD19Q96LW7 228 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 CAMK2N2Q96S95 79 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 MRPL35Q9NZE8 188 aaKnown RBP2.49□□□□□ -2.01
RPS27A-208ENST00000478196 PLAC8Q9NZF1 115 aa2.49□□□□□ -2.01
RPS27A-208ENST00000478196 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 LOC107984640A0A0U1RRK4 108 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 NDUFA1O15239 70 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 HSBP1O75506 76 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 SPINK8P0C7L1 97 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 TLX1NBP0CAT3 122 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 SEC11AP67812 179 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 C9orf116Q5BN46 136 aaPredicted RBP2.48□□□□□ -2.01
RPS27A-208ENST00000478196 Q5VSD8 79 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 KRTAP11-1Q8IUC1 163 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 GEMIN7Q9H840 131 aaKnown RBP2.48□□□□□ -2.01
RPS27A-208ENST00000478196 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
RPS27A-208ENST00000478196 TRBV30A0A0K0K1B3 111 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 A0A1W2PNN7 141 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 TMEM223A0PJW6 202 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 F8VRH5 84 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 LEPROTL1O95214 131 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 FABP4P15090 132 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 HNRNPA3P51991 378 aaKnown RBP2.47□□□□□ -2.01
RPS27A-208ENST00000478196 NDUFA6P56556 154 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 MAJINQ3KP22 176 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 C9orf129Q5T035 196 aaKnown RBP2.47□□□□□ -2.01
RPS27A-208ENST00000478196 COX7B2Q8TF08 81 aa2.47□□□□□ -2.01
RPS27A-208ENST00000478196 CHTOPQ9Y3Y2 248 aaKnown RBP2.47□□□□□ -2.01
RPS27A-208ENST00000478196 NDUFC2-KCTD14E9PQ53 114 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 H3BRM9 83 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 TSPEAR-AS2P59090 65 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 C6orf226Q5I0X4 101 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 Q6ZVH6 145 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 ZNF625Q96I27 306 aaPredicted RBP2.46□□□□□ -2.02
RPS27A-208ENST00000478196 PACRGQ96M98 296 aaPredicted RBP2.46□□□□□ -2.02
RPS27A-208ENST00000478196 FAM218AQ96MZ4 157 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 PMCHL2Q9BQD1 86 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 TOMM7Q9P0U1 55 aa2.46□□□□□ -2.02
RPS27A-208ENST00000478196 SYS1-DBNDD2H3BUS1 97 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 C3orf79P0CE67 100 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 CXCL5P42830 114 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 CKS1BP61024 79 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 RPL18AQ02543 176 aaKnown RBP2.45□□□□□ -2.02
RPS27A-208ENST00000478196 TMEM170BQ5T4T1 132 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 LINC01545Q5VT33 79 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 Q8NBF4 154 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 LINC00474Q9P2X8 69 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 HSPB8Q9UJY1 196 aa2.45□□□□□ -2.02
RPS27A-208ENST00000478196 H0Y8G0 127 aa2.44□□□□□ -2.02
RPS27A-208ENST00000478196 DPM2O94777 84 aa2.44□□□□□ -2.02
RPS27A-208ENST00000478196 PLNP26678 52 aa2.44□□□□□ -2.02
RPS27A-208ENST00000478196 PRR3P79522 188 aaKnown RBP2.44□□□□□ -2.02
RPS27A-208ENST00000478196 SRSF9Q13242 221 aaKnown RBP eCLIP2.44□□□□□ -2.02
RPS27A-208ENST00000478196 PHF5AQ7RTV0 110 aaKnown RBP2.44□□□□□ -2.02
RPS27A-208ENST00000478196 HIST3H2BBQ8N257 126 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms