RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 CRYGAP11844 174 aa8.2□□□□□ -1.1
HDAC7-222ENST00000477937 HERV-K104P63124 156 aa8.2□□□□□ -1.1
HDAC7-222ENST00000477937 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
HDAC7-222ENST00000477937 COLCA2A8K830 154 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 LINC00587B1AMM8 73 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 LINC00310P59036 64 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 Q8NDZ9 215 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 HSPB8Q9UJY1 196 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 UBR4Q5T4S7 5183 aa8.19□□□□□ -1.1
HDAC7-222ENST00000477937 A0A087X002 238 aa8.18□□□□□ -1.1
HDAC7-222ENST00000477937 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
HDAC7-222ENST00000477937 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
HDAC7-222ENST00000477937 FABP4P15090 132 aa8.17□□□□□ -1.1
HDAC7-222ENST00000477937 PRLHP81277 87 aa8.17□□□□□ -1.1
HDAC7-222ENST00000477937 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
HDAC7-222ENST00000477937 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
HDAC7-222ENST00000477937 M0R378 163 aa8.16□□□□□ -1.1
HDAC7-222ENST00000477937 PLNP26678 52 aa8.16□□□□□ -1.1
HDAC7-222ENST00000477937 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
HDAC7-222ENST00000477937 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
HDAC7-222ENST00000477937 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.1
HDAC7-222ENST00000477937 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
HDAC7-222ENST00000477937 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
HDAC7-222ENST00000477937 LEPROTO15243 131 aa8.14□□□□□ -1.11
HDAC7-222ENST00000477937 DPM2O94777 84 aa8.14□□□□□ -1.11
HDAC7-222ENST00000477937 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
HDAC7-222ENST00000477937 LRP2P98164 4655 aa8.13□□□□□ -1.11
HDAC7-222ENST00000477937 TSPAN13O95857 204 aa8.13□□□□□ -1.11
HDAC7-222ENST00000477937 HERVK_113P61574 105 aa8.13□□□□□ -1.11
HDAC7-222ENST00000477937 J3QQQ9 107 aa8.12□□□□□ -1.11
HDAC7-222ENST00000477937 IGKCP01834 107 aa8.12□□□□□ -1.11
HDAC7-222ENST00000477937 TSPEAR-AS2P59090 65 aa8.12□□□□□ -1.11
HDAC7-222ENST00000477937 PRR4Q16378 134 aa8.12□□□□□ -1.11
HDAC7-222ENST00000477937 PMCHL2Q9BQD1 86 aa8.12□□□□□ -1.11
HDAC7-222ENST00000477937 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
HDAC7-222ENST00000477937 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
HDAC7-222ENST00000477937 PRYO14603 147 aa8.1□□□□□ -1.11
HDAC7-222ENST00000477937 NCR3O14931 201 aa8.1□□□□□ -1.11
HDAC7-222ENST00000477937 NMUP48645 174 aa8.1□□□□□ -1.11
HDAC7-222ENST00000477937 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
HDAC7-222ENST00000477937 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
HDAC7-222ENST00000477937 LOC107984156A0A0G2JMH3 177 aa8.08□□□□□ -1.12
HDAC7-222ENST00000477937 S100A12P80511 92 aa8.08□□□□□ -1.12
HDAC7-222ENST00000477937 ARL17AQ8IVW1 177 aa8.08□□□□□ -1.12
HDAC7-222ENST00000477937 DAND5Q8N907 189 aa8.08□□□□□ -1.12
HDAC7-222ENST00000477937 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BKO60814 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BJP06899 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BOP23527 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BBP33778 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BDP58876 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BCP62807 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST2H2BEQ16778 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.07□□□□□ -1.12
HDAC7-222ENST00000477937 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BHQ93079 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BNQ99877 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 HIST1H2BMQ99879 126 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 MIEN1Q9BRT3 115 aa8.07□□□□□ -1.12
HDAC7-222ENST00000477937 TRBV10-3A0A0K0K1G6 114 aa8.06□□□□□ -1.12
HDAC7-222ENST00000477937 ETDCA0A1B0GVM5 59 aa8.06□□□□□ -1.12
HDAC7-222ENST00000477937 SPRR1AP35321 89 aa8.06□□□□□ -1.12
HDAC7-222ENST00000477937 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
HDAC7-222ENST00000477937 TRBV10-2A0A0K0K1G8 114 aa8.05□□□□□ -1.12
HDAC7-222ENST00000477937 E9PLD3 99 aa8.05□□□□□ -1.12
HDAC7-222ENST00000477937 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
HDAC7-222ENST00000477937 SYS1-DBNDD2H3BUS1 97 aa8.04□□□□□ -1.12
HDAC7-222ENST00000477937 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
HDAC7-222ENST00000477937 LPAP08519 4548 aa8.03□□□□□ -1.12
HDAC7-222ENST00000477937 KRTAP4-16G5E9R7 235 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-222ENST00000477937 NDUFC2O95298 119 aa8.03□□□□□ -1.12
HDAC7-222ENST00000477937 DDTP30046 118 aa8.03□□□□□ -1.12
HDAC7-222ENST00000477937 CTAG1AP78358 180 aa8.03□□□□□ -1.12
HDAC7-222ENST00000477937 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-222ENST00000477937 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
HDAC7-222ENST00000477937 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
HDAC7-222ENST00000477937 SMCR5Q8TEV8 140 aa8.02□□□□□ -1.13
HDAC7-222ENST00000477937 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
HDAC7-222ENST00000477937 LINC01545Q5VT33 79 aa8.01□□□□□ -1.13
HDAC7-222ENST00000477937 PET117Q6UWS5 81 aa8.01□□□□□ -1.13
HDAC7-222ENST00000477937 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
HDAC7-222ENST00000477937 B5MCH6 92 aa7.99□□□□□ -1.13
HDAC7-222ENST00000477937 NPC2P61916 151 aa7.99□□□□□ -1.13
HDAC7-222ENST00000477937 IGLV6-57P01721 117 aa7.98□□□□□ -1.13
HDAC7-222ENST00000477937 SPAG11AQ6PDA7 123 aa7.98□□□□□ -1.13
HDAC7-222ENST00000477937 SOSTDC1Q6X4U4 206 aa7.98□□□□□ -1.13
HDAC7-222ENST00000477937 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
HDAC7-222ENST00000477937 RNF213Q63HN8 5207 aa7.98□□□□□ -1.13
HDAC7-222ENST00000477937 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
HDAC7-222ENST00000477937 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
HDAC7-222ENST00000477937 PPDPFQ9H3Y8 114 aa7.97□□□□□ -1.13
HDAC7-222ENST00000477937 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
HDAC7-222ENST00000477937 COA6Q5JTJ3 125 aaKnown RBP7.96□□□□□ -1.14
HDAC7-222ENST00000477937 Q6ZRX8 168 aa7.96□□□□□ -1.14
HDAC7-222ENST00000477937 TRAV23DV6A0A075B6W5 121 aa7.95□□□□□ -1.14
HDAC7-222ENST00000477937 TIMM17BO60830 172 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms