RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 F8W036 122 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 CKS2P33552 79 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 FAM74A3Q4VXF1 159 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 MRPL55Q7Z7F7 128 aaKnown RBP3.3□□□□□ -1.88
LINC00173-202ENST00000477702 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 AMN1Q8IY45 258 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 TCTE3Q8IZS6 198 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 C20orf78Q9BR46 151 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 TIMM21Q9BVV7 248 aa3.3□□□□□ -1.88
LINC00173-202ENST00000477702 HBBP68871 147 aa3.29□□□□□ -1.88
LINC00173-202ENST00000477702 PRLHP81277 87 aa3.29□□□□□ -1.88
LINC00173-202ENST00000477702 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
LINC00173-202ENST00000477702 Q6ZUT4 128 aa3.29□□□□□ -1.88
LINC00173-202ENST00000477702 PACRGQ96M98 296 aaPredicted RBP3.29□□□□□ -1.88
LINC00173-202ENST00000477702 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
LINC00173-202ENST00000477702 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
LINC00173-202ENST00000477702 PPBPP02775 128 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 IFI27P40305 119 aaPredicted RBP3.28□□□□□ -1.88
LINC00173-202ENST00000477702 KIAA0087Q14695 138 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 FAM104BQ5XKR9 115 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 ALKAL2Q6UX46 152 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 LINC01551Q86U37 167 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 AKAP14Q86UN6 197 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 LINC00167Q96N53 147 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 NDUFA12Q9UI09 145 aa3.28□□□□□ -1.88
LINC00173-202ENST00000477702 TRBV24-1A0A075B6N3 115 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 IGHV3OR16-9A0A0B4J2B5 98 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 TRBV30A0A0K0K1B3 111 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 SMKR1H3BMG3 65 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 G0S2P27469 103 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 CKS1BP61024 79 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 RPL32P62910 135 aaKnown RBP3.27□□□□□ -1.89
LINC00173-202ENST00000477702 MRPS36P82909 103 aaKnown RBP3.27□□□□□ -1.89
LINC00173-202ENST00000477702 ADIRFQ15847 76 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 MRPL51Q4U2R6 128 aaKnown RBP3.27□□□□□ -1.89
LINC00173-202ENST00000477702 Q6ZN92 141 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 C2orf88Q9BSF0 95 aa3.27□□□□□ -1.89
LINC00173-202ENST00000477702 PEA15Q15121 130 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 C6orf226Q5I0X4 101 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 TEX43Q6ZNM6 134 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 LINC00518Q8N0U6 118 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 PLEKHB2Q96CS7 222 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 TMEM141Q96I45 108 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 SMIM2Q9BVW6 85 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 TP73-AS1Q9UF72 201 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 NAT8Q9UHE5 227 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 V9GYV3 84 aa3.26□□□□□ -1.89
LINC00173-202ENST00000477702 SMIM27A0A1W2PRY6 76 aa3.25□□□□□ -1.89
LINC00173-202ENST00000477702 D6R8Y8 96 aa3.25□□□□□ -1.89
LINC00173-202ENST00000477702 SRP19P09132 144 aaKnown RBP3.25□□□□□ -1.89
LINC00173-202ENST00000477702 RPL39P62891 51 aaKnown RBP3.25□□□□□ -1.89
LINC00173-202ENST00000477702 SEC11AP67812 179 aa3.25□□□□□ -1.89
LINC00173-202ENST00000477702 TMEM136Q6ZRR5 245 aa3.25□□□□□ -1.89
LINC00173-202ENST00000477702 ORMDL3Q8N138 153 aa3.25□□□□□ -1.89
LINC00173-202ENST00000477702 VCX2Q9H322 139 aa3.25□□□□□ -1.89
LINC00173-202ENST00000477702 IGKV2-28A0A075B6P5 120 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 SCO1O75880 301 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 SNAPINO95295 136 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 SPINK1P00995 79 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 IGKV2D-28P01615 120 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 RPL23P62829 140 aaKnown RBP3.24□□□□□ -1.89
LINC00173-202ENST00000477702 MRPL54Q6P161 138 aaKnown RBP3.24□□□□□ -1.89
LINC00173-202ENST00000477702 FAM19A1Q7Z5A9 133 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 LINC01561Q8N1V8 128 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 PRELID3AQ96N28 172 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 MAP1LC3AQ9H492 121 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 TOMM7Q9P0U1 55 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 CYSLTR1Q9Y271 337 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 LAMTOR2Q9Y2Q5 125 aa3.24□□□□□ -1.89
LINC00173-202ENST00000477702 TMEM238C9JI98 176 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 K7EMI3 77 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 ORMDL2Q53FV1 153 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 Q6Q795 121 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 ATP5L2Q7Z4Y8 100 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 GEMIN7Q9H840 131 aaKnown RBP3.23□□□□□ -1.89
LINC00173-202ENST00000477702 CBY1Q9Y3M2 126 aa3.23□□□□□ -1.89
LINC00173-202ENST00000477702 A0A0U1RRA0 63 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 LOC389332A0A1B0GUA5 103 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 LINC01549A6NIU2 74 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 NPYP01303 97 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 CXCL5P42830 114 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 RAB14P61106 215 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 HERVK_113P63121 156 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 CBLN2Q8IUK8 224 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 FAM19A2Q8N3H0 131 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 SPRR4Q96PI1 79 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 HIGD2AQ9BW72 106 aa3.22□□□□□ -1.89
LINC00173-202ENST00000477702 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
LINC00173-202ENST00000477702 F8VRH5 84 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 SLC25A20O43772 301 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 MT-ND4LP03901 98 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 C2orf66Q6UXQ4 117 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 Q8IZM0 81 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 Q8N8P6 123 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 NKAPP1Q8N9T2 125 aa3.21□□□□□ -1.9
LINC00173-202ENST00000477702 NXT2Q9NPJ8 142 aaKnown RBP3.21□□□□□ -1.9
LINC00173-202ENST00000477702 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms