RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 HERV-K104P63124 156 aa13.36□□□□□ -0.27
CNIH4-208ENST00000477413 M0R378 163 aa13.35□□□□□ -0.27
CNIH4-208ENST00000477413 SERF1AO75920 110 aa13.35□□□□□ -0.27
CNIH4-208ENST00000477413 CRYGAP11844 174 aa13.35□□□□□ -0.27
CNIH4-208ENST00000477413 FAM229BQ4G0N7 80 aa13.35□□□□□ -0.27
CNIH4-208ENST00000477413 LINC00158P58513 81 aa13.34□□□□□ -0.27
CNIH4-208ENST00000477413 LEPROTL1O95214 131 aa13.33□□□□□ -0.28
CNIH4-208ENST00000477413 COLCA2A8K830 154 aa13.32□□□□□ -0.28
CNIH4-208ENST00000477413 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
CNIH4-208ENST00000477413 SLC7A5P1Q8MH63 180 aa13.32□□□□□ -0.28
CNIH4-208ENST00000477413 LINC00587B1AMM8 73 aa13.31□□□□□ -0.28
CNIH4-208ENST00000477413 PLNP26678 52 aa13.31□□□□□ -0.28
CNIH4-208ENST00000477413 RNF213Q63HN8 5207 aa13.3□□□□□ -0.28
CNIH4-208ENST00000477413 PRLHP81277 87 aa13.3□□□□□ -0.28
CNIH4-208ENST00000477413 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
CNIH4-208ENST00000477413 LPAP08519 4548 aa13.3□□□□□ -0.28
CNIH4-208ENST00000477413 SMIM13P0DJ93 91 aa13.29□□□□□ -0.28
CNIH4-208ENST00000477413 KRTAP13-2Q52LG2 175 aa13.29□□□□□ -0.28
CNIH4-208ENST00000477413 FAM19A1Q7Z5A9 133 aa13.29□□□□□ -0.28
CNIH4-208ENST00000477413 TYMSOSQ8TAI1 123 aa13.29□□□□□ -0.28
CNIH4-208ENST00000477413 HSPB8Q9UJY1 196 aa13.29□□□□□ -0.28
CNIH4-208ENST00000477413 IGKV2D-26A0A0A0MRZ7 120 aa13.27□□□□□ -0.29
CNIH4-208ENST00000477413 MYMXA0A1B0GTQ4 84 aa13.27□□□□□ -0.29
CNIH4-208ENST00000477413 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
CNIH4-208ENST00000477413 LOC107984156A0A0G2JMH3 177 aa13.26□□□□□ -0.29
CNIH4-208ENST00000477413 LEPROTO15243 131 aa13.26□□□□□ -0.29
CNIH4-208ENST00000477413 TSPEAR-AS2P59090 65 aa13.26□□□□□ -0.29
CNIH4-208ENST00000477413 MEIG1Q5JSS6 88 aa13.26□□□□□ -0.29
CNIH4-208ENST00000477413 ARL17AQ8IVW1 177 aa13.26□□□□□ -0.29
CNIH4-208ENST00000477413 A0A0U1RRA0 63 aa13.25□□□□□ -0.29
CNIH4-208ENST00000477413 PLEKHB2Q96CS7 222 aa13.25□□□□□ -0.29
CNIH4-208ENST00000477413 ANAPC11Q9NYG5 84 aa13.25□□□□□ -0.29
CNIH4-208ENST00000477413 H0Y8G0 127 aa13.24□□□□□ -0.29
CNIH4-208ENST00000477413 PRYO14603 147 aa13.24□□□□□ -0.29
CNIH4-208ENST00000477413 CTAG1AP78358 180 aa13.24□□□□□ -0.29
CNIH4-208ENST00000477413 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
CNIH4-208ENST00000477413 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
CNIH4-208ENST00000477413 DPM2O94777 84 aa13.23□□□□□ -0.29
CNIH4-208ENST00000477413 SPRR1AP35321 89 aa13.23□□□□□ -0.29
CNIH4-208ENST00000477413 ATP6V1G1O75348 118 aa13.22□□□□□ -0.29
CNIH4-208ENST00000477413 KCNQ1DNQ9H478 68 aa13.22□□□□□ -0.29
CNIH4-208ENST00000477413 NMUP48645 174 aa13.21□□□□□ -0.29
CNIH4-208ENST00000477413 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.29
CNIH4-208ENST00000477413 KRTAP4-16G5E9R7 235 aaPredicted RBP13.2□□□□□ -0.3
CNIH4-208ENST00000477413 J3QQQ9 107 aa13.2□□□□□ -0.3
CNIH4-208ENST00000477413 IGKCP01834 107 aa13.19□□□□□ -0.3
CNIH4-208ENST00000477413 HERVK_113P61574 105 aa13.19□□□□□ -0.3
CNIH4-208ENST00000477413 FABP4P15090 132 aa13.18□□□□□ -0.3
CNIH4-208ENST00000477413 PRR4Q16378 134 aa13.18□□□□□ -0.3
CNIH4-208ENST00000477413 NCR3O14931 201 aa13.17□□□□□ -0.3
CNIH4-208ENST00000477413 TRBV10-2A0A0K0K1G8 114 aa13.16□□□□□ -0.3
CNIH4-208ENST00000477413 TSPAN13O95857 204 aa13.16□□□□□ -0.3
CNIH4-208ENST00000477413 LINC00304Q8N9R0 145 aa13.16□□□□□ -0.3
CNIH4-208ENST00000477413 HIGD2AQ9BW72 106 aa13.16□□□□□ -0.3
CNIH4-208ENST00000477413 SPRR4Q96PI1 79 aa13.15□□□□□ -0.3
CNIH4-208ENST00000477413 PMCHL2Q9BQD1 86 aa13.15□□□□□ -0.3
CNIH4-208ENST00000477413 TRBV10-3A0A0K0K1G6 114 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BKO60814 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BJP06899 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BOP23527 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BBP33778 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BDP58876 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BCP62807 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST2H2BEQ16778 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BHQ93079 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BNQ99877 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 HIST1H2BMQ99879 126 aa13.14□□□□□ -0.31
CNIH4-208ENST00000477413 ZNF706Q9Y5V0 76 aaPredicted RBP13.13□□□□□ -0.31
CNIH4-208ENST00000477413 E9PLD3 99 aa13.12□□□□□ -0.31
CNIH4-208ENST00000477413 LGALS3P17931 250 aaKnown RBP13.12□□□□□ -0.31
CNIH4-208ENST00000477413 NDUFC2O95298 119 aa13.11□□□□□ -0.31
CNIH4-208ENST00000477413 DAND5Q8N907 189 aa13.11□□□□□ -0.31
CNIH4-208ENST00000477413 SPANXB1Q9NS25 103 aaPredicted RBP13.11□□□□□ -0.31
CNIH4-208ENST00000477413 SYS1-DBNDD2H3BUS1 97 aa13.09□□□□□ -0.31
CNIH4-208ENST00000477413 ETDCA0A1B0GVM5 59 aa13.08□□□□□ -0.32
CNIH4-208ENST00000477413 C3orf22Q8N5N4 141 aa13.08□□□□□ -0.32
CNIH4-208ENST00000477413 SMCR5Q8TEV8 140 aa13.08□□□□□ -0.32
CNIH4-208ENST00000477413 S100A12P80511 92 aa13.07□□□□□ -0.32
CNIH4-208ENST00000477413 LINC01545Q5VT33 79 aa13.07□□□□□ -0.32
CNIH4-208ENST00000477413 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
CNIH4-208ENST00000477413 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
CNIH4-208ENST00000477413 IGLV6-57P01721 117 aa13.06□□□□□ -0.32
CNIH4-208ENST00000477413 DDTP30046 118 aa13.06□□□□□ -0.32
CNIH4-208ENST00000477413 LINC00483Q53H64 154 aa13.06□□□□□ -0.32
CNIH4-208ENST00000477413 B5MCH6 92 aa13.05□□□□□ -0.32
CNIH4-208ENST00000477413 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
CNIH4-208ENST00000477413 SPAG11AQ6PDA7 123 aa13.04□□□□□ -0.32
CNIH4-208ENST00000477413 SOSTDC1Q6X4U4 206 aa13.04□□□□□ -0.32
CNIH4-208ENST00000477413 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.33
CNIH4-208ENST00000477413 PET117Q6UWS5 81 aa13.02□□□□□ -0.33
CNIH4-208ENST00000477413 Q6ZRX8 168 aa13.02□□□□□ -0.33
CNIH4-208ENST00000477413 LITAFQ99732 161 aa13.01□□□□□ -0.33
CNIH4-208ENST00000477413 EIF4EBP3O60516 100 aaPredicted RBP13□□□□□ -0.33
CNIH4-208ENST00000477413 TIMM17BO60830 172 aa13□□□□□ -0.33
CNIH4-208ENST00000477413 TPRXLQ17RH7 258 aa13□□□□□ -0.33
CNIH4-208ENST00000477413 Q9BRP9 147 aa12.99□□□□□ -0.33
CNIH4-208ENST00000477413 RETNLBQ9BQ08 111 aa12.98□□□□□ -0.33
CNIH4-208ENST00000477413 TRAV23DV6A0A075B6W5 121 aa12.96□□□□□ -0.33
CNIH4-208ENST00000477413 S100A7L2Q5SY68 101 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 291.7 ms