RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CPAMD8Q8IZJ3 1885 aa12.92□□□□□ -0.34
VARS2-209ENST00000477288 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
VARS2-209ENST00000477288 MTORP42345 2549 aa12.92□□□□□ -0.34
VARS2-209ENST00000477288 CXCL6P80162 114 aa12.91□□□□□ -0.34
VARS2-209ENST00000477288 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
VARS2-209ENST00000477288 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
VARS2-209ENST00000477288 SPATA3Q8NHX4 192 aa12.9□□□□□ -0.34
VARS2-209ENST00000477288 FAM229AH3BQW9 127 aa12.9□□□□□ -0.34
VARS2-209ENST00000477288 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
VARS2-209ENST00000477288 ACYP2P14621 99 aa12.88□□□□□ -0.35
VARS2-209ENST00000477288 SPAG11AQ6PDA7 123 aa12.87□□□□□ -0.35
VARS2-209ENST00000477288 AGRNO00468 2067 aa12.86□□□□□ -0.35
VARS2-209ENST00000477288 CHTF8P0CG12 524 aa12.85□□□□□ -0.35
VARS2-209ENST00000477288 MUC4Q99102 2169 aa12.85□□□□□ -0.35
VARS2-209ENST00000477288 PHF5AQ7RTV0 110 aaKnown RBP12.85□□□□□ -0.35
VARS2-209ENST00000477288 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
VARS2-209ENST00000477288 IGLV8-61A0A075B6I0 122 aa12.84□□□□□ -0.35
VARS2-209ENST00000477288 RTL8CO15255 209 aa12.82□□□□□ -0.36
VARS2-209ENST00000477288 TP53AIP1Q9HCN2 124 aa12.82□□□□□ -0.36
VARS2-209ENST00000477288 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
VARS2-209ENST00000477288 C16orf90A8MZG2 172 aa12.82□□□□□ -0.36
VARS2-209ENST00000477288 LINC00315P59091 139 aa12.82□□□□□ -0.36
VARS2-209ENST00000477288 KRTAP24-1Q3LI83 254 aa12.8□□□□□ -0.36
VARS2-209ENST00000477288 POLQO75417 2590 aa12.8□□□□□ -0.36
VARS2-209ENST00000477288 KIF25-AS1Q9Y6Z4 181 aa12.8□□□□□ -0.36
VARS2-209ENST00000477288 TYMSOSQ8TAI1 123 aa12.8□□□□□ -0.36
VARS2-209ENST00000477288 LINC00313P59037 77 aa12.79□□□□□ -0.36
VARS2-209ENST00000477288 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
VARS2-209ENST00000477288 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
VARS2-209ENST00000477288 IGHV3OR16-9A0A0B4J2B5 98 aa12.78□□□□□ -0.36
VARS2-209ENST00000477288 EPG5Q9HCE0 2579 aa12.77□□□□□ -0.37
VARS2-209ENST00000477288 SERTAD4-AS1Q5TG53 156 aa12.76□□□□□ -0.37
VARS2-209ENST00000477288 RPL37AP61513 92 aaKnown RBP12.75□□□□□ -0.37
VARS2-209ENST00000477288 LINC00476Q8WZB0 136 aa12.75□□□□□ -0.37
VARS2-209ENST00000477288 NBDYA0A0U1RRE5 68 aa12.75□□□□□ -0.37
VARS2-209ENST00000477288 ATP11AUNQ6ZP68 121 aa12.74□□□□□ -0.37
VARS2-209ENST00000477288 Q96NJ1 140 aa12.74□□□□□ -0.37
VARS2-209ENST00000477288 Q6ZRP5 223 aa12.73□□□□□ -0.37
VARS2-209ENST00000477288 EPM2AB3EWF7 344 aa12.73□□□□□ -0.37
VARS2-209ENST00000477288 Q8NBF4 154 aa12.73□□□□□ -0.37
VARS2-209ENST00000477288 SPINT4Q6UDR6 99 aa12.72□□□□□ -0.37
VARS2-209ENST00000477288 CDIP1Q9H305 208 aa12.72□□□□□ -0.37
VARS2-209ENST00000477288 ELOF1P60002 83 aaKnown RBP12.72□□□□□ -0.37
VARS2-209ENST00000477288 ST20-AS1Q8NBB2 130 aa12.72□□□□□ -0.37
VARS2-209ENST00000477288 J3QL48 77 aa12.71□□□□□ -0.37
VARS2-209ENST00000477288 H3BNG1 76 aa12.71□□□□□ -0.37
VARS2-209ENST00000477288 FAM218AQ96MZ4 157 aa12.71□□□□□ -0.38
VARS2-209ENST00000477288 ACANP16112 2415 aa12.71□□□□□ -0.38
VARS2-209ENST00000477288 COL4A2P08572 1712 aa12.68□□□□□ -0.38
VARS2-209ENST00000477288 LINC00588Q9Y4M8 146 aa12.68□□□□□ -0.38
VARS2-209ENST00000477288 Q6ZRX8 168 aa12.68□□□□□ -0.38
VARS2-209ENST00000477288 FAM19A4Q96LR4 140 aa12.67□□□□□ -0.38
VARS2-209ENST00000477288 Q6ZQT0 140 aa12.64□□□□□ -0.39
VARS2-209ENST00000477288 WWC2-AS2Q96NR7 200 aa12.64□□□□□ -0.39
VARS2-209ENST00000477288 PRO0628Q9UI54 55 aa12.64□□□□□ -0.39
VARS2-209ENST00000477288 TRAV22A0A0B4J277 110 aa12.64□□□□□ -0.39
VARS2-209ENST00000477288 C4orf26Q17RF5 130 aa12.64□□□□□ -0.39
VARS2-209ENST00000477288 ANKRD17O75179 2603 aaKnown RBP12.63□□□□□ -0.39
VARS2-209ENST00000477288 LINC01546A6NGU7 62 aa12.62□□□□□ -0.39
VARS2-209ENST00000477288 Q8NAQ8 132 aa12.61□□□□□ -0.39
VARS2-209ENST00000477288 COX6B2Q6YFQ2 88 aa12.6□□□□□ -0.39
VARS2-209ENST00000477288 DNAH12Q6ZR08 3092 aa12.59□□□□□ -0.39
VARS2-209ENST00000477288 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
VARS2-209ENST00000477288 C8orf87E5RJ46 101 aa12.59□□□□□ -0.39
VARS2-209ENST00000477288 BCE1O60756 84 aa12.58□□□□□ -0.39
VARS2-209ENST00000477288 TM2D3Q9BRN9 247 aa12.58□□□□□ -0.39
VARS2-209ENST00000477288 H3BPC8 53 aa12.58□□□□□ -0.4
VARS2-209ENST00000477288 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.4
VARS2-209ENST00000477288 SSBP3-AS1Q7Z2R9 100 aa12.58□□□□□ -0.4
VARS2-209ENST00000477288 IGLV5-45A0A087WSX0 123 aa12.57□□□□□ -0.4
VARS2-209ENST00000477288 A0A1B0GW54 56 aa12.56□□□□□ -0.4
VARS2-209ENST00000477288 LOC110117498A0A087WWA1 95 aa12.55□□□□□ -0.4
VARS2-209ENST00000477288 FAM168BA1KXE4 195 aa12.55□□□□□ -0.4
VARS2-209ENST00000477288 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
VARS2-209ENST00000477288 APLNQ9ULZ1 77 aa12.53□□□□□ -0.4
VARS2-209ENST00000477288 LINC01600Q96MT4 127 aa12.51□□□□□ -0.41
VARS2-209ENST00000477288 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
VARS2-209ENST00000477288 TRBV7-4A0A0J9YYF1 115 aa12.5□□□□□ -0.41
VARS2-209ENST00000477288 LOC101927531A0A1B0GV80 90 aa12.5□□□□□ -0.41
VARS2-209ENST00000477288 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
VARS2-209ENST00000477288 A8MWP4 228 aa12.48□□□□□ -0.41
VARS2-209ENST00000477288 MRPL34Q9BQ48 92 aaKnown RBP12.47□□□□□ -0.41
VARS2-209ENST00000477288 PTPRBP23467 1997 aa12.47□□□□□ -0.41
VARS2-209ENST00000477288 UTRNP46939 3433 aa12.46□□□□□ -0.41
VARS2-209ENST00000477288 K7EQZ3 153 aa12.46□□□□□ -0.41
VARS2-209ENST00000477288 DNAH10OSP0CZ25 163 aa12.46□□□□□ -0.41
VARS2-209ENST00000477288 DSCR10P59022 87 aa12.46□□□□□ -0.42
VARS2-209ENST00000477288 C9orf92A6NGG3 77 aa12.45□□□□□ -0.42
VARS2-209ENST00000477288 COA5Q86WW8 74 aa12.43□□□□□ -0.42
VARS2-209ENST00000477288 COL27A1Q8IZC6 1860 aaPredicted RBP12.42□□□□□ -0.42
VARS2-209ENST00000477288 PRO0461Q9UI25 63 aa12.42□□□□□ -0.42
VARS2-209ENST00000477288 F8P00451 2351 aa12.41□□□□□ -0.42
VARS2-209ENST00000477288 VPREB1P12018 145 aa12.4□□□□□ -0.42
VARS2-209ENST00000477288 IGLV6-57P01721 117 aa12.39□□□□□ -0.43
VARS2-209ENST00000477288 CRIPTQ9P021 101 aa12.38□□□□□ -0.43
VARS2-209ENST00000477288 PCSK5Q92824 1860 aa12.38□□□□□ -0.43
VARS2-209ENST00000477288 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
VARS2-209ENST00000477288 KRTAP10-11P60412 298 aa12.37□□□□□ -0.43
VARS2-209ENST00000477288 A8MUN3 132 aa12.37□□□□□ -0.43
VARS2-209ENST00000477288 RPS28P62857 69 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms