RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 Q8NDZ9 215 aa12.8□□□□□ -0.36
CLK2-205ENST00000476983 TAX1BP3O14907 124 aa12.8□□□□□ -0.36
CLK2-205ENST00000476983 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
CLK2-205ENST00000476983 GAGE2BQ13066 116 aa12.8□□□□□ -0.36
CLK2-205ENST00000476983 LINC01620Q4KN68 170 aa12.8□□□□□ -0.36
CLK2-205ENST00000476983 PPDPFQ9H3Y8 114 aa12.8□□□□□ -0.36
CLK2-205ENST00000476983 DNAH17Q9UFH2 4485 aa12.79□□□□□ -0.36
CLK2-205ENST00000476983 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
CLK2-205ENST00000476983 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
CLK2-205ENST00000476983 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
CLK2-205ENST00000476983 LOC107984640A0A0U1RRK4 108 aa12.78□□□□□ -0.36
CLK2-205ENST00000476983 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
CLK2-205ENST00000476983 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
CLK2-205ENST00000476983 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
CLK2-205ENST00000476983 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
CLK2-205ENST00000476983 LBHQ53QV2 105 aaPredicted RBP12.77□□□□□ -0.37
CLK2-205ENST00000476983 C9orf129Q5T035 196 aaKnown RBP12.77□□□□□ -0.37
CLK2-205ENST00000476983 H7C2G1 150 aa12.76□□□□□ -0.37
CLK2-205ENST00000476983 PRO1854Q9UHT4 67 aa12.76□□□□□ -0.37
CLK2-205ENST00000476983 NCR3O14931 201 aa12.75□□□□□ -0.37
CLK2-205ENST00000476983 C9orf163Q8N9P6 203 aa12.75□□□□□ -0.37
CLK2-205ENST00000476983 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
CLK2-205ENST00000476983 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
CLK2-205ENST00000476983 A0A096LNI7 61 aa12.74□□□□□ -0.37
CLK2-205ENST00000476983 RPL13AP40429 203 aaKnown RBP12.74□□□□□ -0.37
CLK2-205ENST00000476983 IGKV2-24A0A0C4DH68 120 aa12.73□□□□□ -0.37
CLK2-205ENST00000476983 NDUFC2O95298 119 aa12.73□□□□□ -0.37
CLK2-205ENST00000476983 TSPAN13O95857 204 aa12.72□□□□□ -0.37
CLK2-205ENST00000476983 H3BUT2 72 aa12.71□□□□□ -0.37
CLK2-205ENST00000476983 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 FAM168BA1KXE4 195 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 Q1RN00 199 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 OR13C6PQ8NH95 151 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 IGLV5-52A0A0A0MRZ9 124 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 C9orf118A6NHY6 69 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 CHTF8P0CG12 524 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 VPREB1P12018 145 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 SERTAD4-AS1Q5TG53 156 aa12.7□□□□□ -0.38
CLK2-205ENST00000476983 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
CLK2-205ENST00000476983 C16orf90A8MZG2 172 aa12.69□□□□□ -0.38
CLK2-205ENST00000476983 A0A1B0GV90 55 aa12.68□□□□□ -0.38
CLK2-205ENST00000476983 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
CLK2-205ENST00000476983 RYR2Q92736 4967 aa12.67□□□□□ -0.38
CLK2-205ENST00000476983 KRTAP10-2P60368 255 aa12.66□□□□□ -0.38
CLK2-205ENST00000476983 FAM19A5Q7Z5A7 132 aaPredicted RBP12.66□□□□□ -0.38
CLK2-205ENST00000476983 FAT2Q9NYQ8 4349 aa12.65□□□□□ -0.38
CLK2-205ENST00000476983 KMT2CQ8NEZ4 4911 aaKnown RBP12.65□□□□□ -0.38
CLK2-205ENST00000476983 S100A7L2Q5SY68 101 aa12.64□□□□□ -0.39
CLK2-205ENST00000476983 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
CLK2-205ENST00000476983 DNAH11Q96DT5 4516 aa12.64□□□□□ -0.39
CLK2-205ENST00000476983 KRTAP7-1Q8IUC3 87 aa12.63□□□□□ -0.39
CLK2-205ENST00000476983 NKAPP1Q8N9T2 125 aa12.63□□□□□ -0.39
CLK2-205ENST00000476983 TRBV10-2A0A0K0K1G8 114 aa12.63□□□□□ -0.39
CLK2-205ENST00000476983 PANO1I0J062 215 aa12.63□□□□□ -0.39
CLK2-205ENST00000476983 PSMB2P49721 201 aa12.63□□□□□ -0.39
CLK2-205ENST00000476983 PLA2G2DQ9UNK4 145 aa12.63□□□□□ -0.39
CLK2-205ENST00000476983 GAGE10A6NGK3 116 aa12.62□□□□□ -0.39
CLK2-205ENST00000476983 A0A1W2PPM0 123 aa12.61□□□□□ -0.39
CLK2-205ENST00000476983 A0A1W2PNN7 141 aa12.61□□□□□ -0.39
CLK2-205ENST00000476983 M0R378 163 aa12.61□□□□□ -0.39
CLK2-205ENST00000476983 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
CLK2-205ENST00000476983 TRIAP1O43715 76 aa12.6□□□□□ -0.39
CLK2-205ENST00000476983 SMIM11BQ8TCY0 68 aa12.6□□□□□ -0.39
CLK2-205ENST00000476983 TMEM126AQ9H061 195 aa12.6□□□□□ -0.39
CLK2-205ENST00000476983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.6□□□□□ -0.39
CLK2-205ENST00000476983 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
CLK2-205ENST00000476983 C22orf24Q9Y442 160 aa12.59□□□□□ -0.39
CLK2-205ENST00000476983 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.4
CLK2-205ENST00000476983 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
CLK2-205ENST00000476983 DNAH5Q8TE73 4624 aa12.57□□□□□ -0.4
CLK2-205ENST00000476983 FABP2P12104 132 aa12.57□□□□□ -0.4
CLK2-205ENST00000476983 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
CLK2-205ENST00000476983 SCGB1C2P0DMR2 95 aa12.57□□□□□ -0.4
CLK2-205ENST00000476983 VAMP3Q15836 100 aa12.57□□□□□ -0.4
CLK2-205ENST00000476983 LINC00336Q6ZUF6 198 aa12.57□□□□□ -0.4
CLK2-205ENST00000476983 M0QXV9 152 aa12.56□□□□□ -0.4
CLK2-205ENST00000476983 SPACA4Q8TDM5 124 aa12.56□□□□□ -0.4
CLK2-205ENST00000476983 LINC00474Q9P2X8 69 aa12.56□□□□□ -0.4
CLK2-205ENST00000476983 RPL28P46779 137 aaKnown RBP12.55□□□□□ -0.4
CLK2-205ENST00000476983 PKD1P98161 4303 aa12.55□□□□□ -0.4
CLK2-205ENST00000476983 MRPL55Q7Z7F7 128 aaKnown RBP12.55□□□□□ -0.4
CLK2-205ENST00000476983 RPL37AP8A6NKH3 93 aa12.54□□□□□ -0.4
CLK2-205ENST00000476983 LINC00167Q96N53 147 aa12.54□□□□□ -0.4
CLK2-205ENST00000476983 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
CLK2-205ENST00000476983 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
CLK2-205ENST00000476983 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
CLK2-205ENST00000476983 COX6CP09669 75 aa12.51□□□□□ -0.41
CLK2-205ENST00000476983 CLEC2BQ92478 149 aa12.51□□□□□ -0.41
CLK2-205ENST00000476983 A0A087WYN8 130 aa12.5□□□□□ -0.41
CLK2-205ENST00000476983 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
CLK2-205ENST00000476983 LYRM7Q5U5X0 104 aa12.5□□□□□ -0.41
CLK2-205ENST00000476983 TCL1BO95988 128 aa12.49□□□□□ -0.41
CLK2-205ENST00000476983 K7EP34 96 aa12.48□□□□□ -0.41
CLK2-205ENST00000476983 KRTAP10-1P60331 282 aa12.48□□□□□ -0.41
CLK2-205ENST00000476983 IGLV1-50A0A075B6I6 118 aa12.48□□□□□ -0.41
CLK2-205ENST00000476983 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
CLK2-205ENST00000476983 A0A1B0GVY2 172 aa12.46□□□□□ -0.41
CLK2-205ENST00000476983 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.41
CLK2-205ENST00000476983 DIRC1Q969H9 104 aa12.46□□□□□ -0.42
CLK2-205ENST00000476983 KCNQ1DNQ9H478 68 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms