RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 LINC00158P58513 81 aa12.72□□□□□ -0.37
LIMK1-204ENST00000476792 H0Y8G0 127 aa12.71□□□□□ -0.37
LIMK1-204ENST00000476792 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.37
LIMK1-204ENST00000476792 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
LIMK1-204ENST00000476792 Q8NDZ9 215 aa12.7□□□□□ -0.38
LIMK1-204ENST00000476792 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
LIMK1-204ENST00000476792 ANAPC11Q9NYG5 84 aa12.68□□□□□ -0.38
LIMK1-204ENST00000476792 A0A087X002 238 aa12.67□□□□□ -0.38
LIMK1-204ENST00000476792 PRLHP81277 87 aa12.67□□□□□ -0.38
LIMK1-204ENST00000476792 KRTAP13-1Q8IUC0 172 aa12.67□□□□□ -0.38
LIMK1-204ENST00000476792 SERF1AO75920 110 aa12.66□□□□□ -0.38
LIMK1-204ENST00000476792 FAM19A1Q7Z5A9 133 aa12.66□□□□□ -0.38
LIMK1-204ENST00000476792 CRYGAP11844 174 aa12.65□□□□□ -0.38
LIMK1-204ENST00000476792 MEIG1Q5JSS6 88 aa12.65□□□□□ -0.38
LIMK1-204ENST00000476792 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
LIMK1-204ENST00000476792 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
LIMK1-204ENST00000476792 TSPAN13O95857 204 aa12.64□□□□□ -0.39
LIMK1-204ENST00000476792 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
LIMK1-204ENST00000476792 LINC00310P59036 64 aa12.63□□□□□ -0.39
LIMK1-204ENST00000476792 TYMSOSQ8TAI1 123 aa12.63□□□□□ -0.39
LIMK1-204ENST00000476792 PRR4Q16378 134 aa12.62□□□□□ -0.39
LIMK1-204ENST00000476792 M0R378 163 aa12.61□□□□□ -0.39
LIMK1-204ENST00000476792 FABP4P15090 132 aa12.61□□□□□ -0.39
LIMK1-204ENST00000476792 NDUFA12Q9UI09 145 aa12.6□□□□□ -0.39
LIMK1-204ENST00000476792 BOD1L2Q8IYS8 172 aa12.59□□□□□ -0.39
LIMK1-204ENST00000476792 MIR7-3HGQ8N6C7 128 aa12.59□□□□□ -0.39
LIMK1-204ENST00000476792 COLCA2A8K830 154 aa12.58□□□□□ -0.4
LIMK1-204ENST00000476792 HERV-K104P63124 156 aa12.58□□□□□ -0.4
LIMK1-204ENST00000476792 PMCHL2Q9BQD1 86 aa12.57□□□□□ -0.4
LIMK1-204ENST00000476792 HSPB8Q9UJY1 196 aa12.57□□□□□ -0.4
LIMK1-204ENST00000476792 MYMXA0A1B0GTQ4 84 aa12.56□□□□□ -0.4
LIMK1-204ENST00000476792 NCR3O14931 201 aa12.56□□□□□ -0.4
LIMK1-204ENST00000476792 KRTAP13-2Q52LG2 175 aa12.56□□□□□ -0.4
LIMK1-204ENST00000476792 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
LIMK1-204ENST00000476792 HIGD2AQ9BW72 106 aa12.55□□□□□ -0.4
LIMK1-204ENST00000476792 LEPROTO15243 131 aa12.54□□□□□ -0.4
LIMK1-204ENST00000476792 FAM229BQ4G0N7 80 aa12.54□□□□□ -0.4
LIMK1-204ENST00000476792 LINC00587B1AMM8 73 aa12.53□□□□□ -0.4
LIMK1-204ENST00000476792 PLNP26678 52 aa12.53□□□□□ -0.4
LIMK1-204ENST00000476792 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
LIMK1-204ENST00000476792 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
LIMK1-204ENST00000476792 IGKV2D-26A0A0A0MRZ7 120 aa12.52□□□□□ -0.41
LIMK1-204ENST00000476792 DPM2O94777 84 aa12.52□□□□□ -0.41
LIMK1-204ENST00000476792 LPAP08519 4548 aa12.51□□□□□ -0.41
LIMK1-204ENST00000476792 DAND5Q8N907 189 aa12.51□□□□□ -0.41
LIMK1-204ENST00000476792 RNF213Q63HN8 5207 aa12.51□□□□□ -0.41
LIMK1-204ENST00000476792 J3QQQ9 107 aa12.5□□□□□ -0.41
LIMK1-204ENST00000476792 IGKCP01834 107 aa12.5□□□□□ -0.41
LIMK1-204ENST00000476792 HERVK_113P61574 105 aa12.5□□□□□ -0.41
LIMK1-204ENST00000476792 PRYO14603 147 aa12.48□□□□□ -0.41
LIMK1-204ENST00000476792 LGALS3P17931 250 aaKnown RBP12.48□□□□□ -0.41
LIMK1-204ENST00000476792 LINC00304Q8N9R0 145 aa12.48□□□□□ -0.41
LIMK1-204ENST00000476792 TRBV10-3A0A0K0K1G6 114 aa12.46□□□□□ -0.41
LIMK1-204ENST00000476792 C3orf22Q8N5N4 141 aa12.45□□□□□ -0.42
LIMK1-204ENST00000476792 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
LIMK1-204ENST00000476792 ETDCA0A1B0GVM5 59 aa12.43□□□□□ -0.42
LIMK1-204ENST00000476792 SPRR4Q96PI1 79 aa12.43□□□□□ -0.42
LIMK1-204ENST00000476792 RETNLBQ9BQ08 111 aa12.43□□□□□ -0.42
LIMK1-204ENST00000476792 NMUP48645 174 aa12.42□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 SPRR1AP35321 89 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
LIMK1-204ENST00000476792 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 SMCR5Q8TEV8 140 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 MIEN1Q9BRT3 115 aa12.41□□□□□ -0.42
LIMK1-204ENST00000476792 S100A12P80511 92 aa12.4□□□□□ -0.42
LIMK1-204ENST00000476792 ZNF706Q9Y5V0 76 aaPredicted RBP12.4□□□□□ -0.42
LIMK1-204ENST00000476792 LOC107984156A0A0G2JMH3 177 aa12.38□□□□□ -0.43
LIMK1-204ENST00000476792 KRTAP4-16G5E9R7 235 aaPredicted RBP12.38□□□□□ -0.43
LIMK1-204ENST00000476792 SYS1-DBNDD2H3BUS1 97 aa12.38□□□□□ -0.43
LIMK1-204ENST00000476792 DDTP30046 118 aa12.38□□□□□ -0.43
LIMK1-204ENST00000476792 NPC2P61916 151 aa12.38□□□□□ -0.43
LIMK1-204ENST00000476792 ARL17AQ8IVW1 177 aa12.38□□□□□ -0.43
LIMK1-204ENST00000476792 PPDPFQ9H3Y8 114 aa12.38□□□□□ -0.43
LIMK1-204ENST00000476792 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
LIMK1-204ENST00000476792 TRBV10-2A0A0K0K1G8 114 aa12.36□□□□□ -0.43
LIMK1-204ENST00000476792 E9PLD3 99 aa12.36□□□□□ -0.43
LIMK1-204ENST00000476792 S100A7L2Q5SY68 101 aa12.35□□□□□ -0.43
LIMK1-204ENST00000476792 ADAMTSL4-AS1Q5T5F5 129 aa12.35□□□□□ -0.43
LIMK1-204ENST00000476792 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-204ENST00000476792 B5MCH6 92 aa12.34□□□□□ -0.43
LIMK1-204ENST00000476792 SOSTDC1Q6X4U4 206 aa12.34□□□□□ -0.43
LIMK1-204ENST00000476792 EIF4EBP3O60516 100 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-204ENST00000476792 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
LIMK1-204ENST00000476792 NDUFC2O95298 119 aa12.31□□□□□ -0.44
LIMK1-204ENST00000476792 ERC2-IT1O76042 136 aa12.3□□□□□ -0.44
LIMK1-204ENST00000476792 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
LIMK1-204ENST00000476792 C4orf48Q5BLP8 95 aa12.29□□□□□ -0.44
LIMK1-204ENST00000476792 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
LIMK1-204ENST00000476792 IGLV6-57P01721 117 aa12.28□□□□□ -0.44
LIMK1-204ENST00000476792 SPAG11AQ6PDA7 123 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms