RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	HERV-K104	P63124	156 aa		6.2	□□□□□ -1.42
CCM2-208	ENST00000476594	KRTAP11-1	Q8IUC1	163 aa		6.2	□□□□□ -1.42
CCM2-208	ENST00000476594	SLC7A5P1	Q8MH63	180 aa		6.2	□□□□□ -1.42
CCM2-208	ENST00000476594	FAM19A2	Q8N3H0	131 aa		6.2	□□□□□ -1.42
CCM2-208	ENST00000476594	ZNF625	Q96I27	306 aa	Predicted RBP	6.2	□□□□□ -1.42
CCM2-208	ENST00000476594	LINC00167	Q96N53	147 aa		6.2	□□□□□ -1.42
CCM2-208	ENST00000476594	GAGE10	A6NGK3	116 aa		6.19	□□□□□ -1.42
CCM2-208	ENST00000476594	SERF1A	O75920	110 aa		6.19	□□□□□ -1.42
CCM2-208	ENST00000476594	UBE2A	P49459	152 aa		6.19	□□□□□ -1.42
CCM2-208	ENST00000476594	MEIG1	Q5JSS6	88 aa		6.19	□□□□□ -1.42
CCM2-208	ENST00000476594	MAP1LC3C	Q9BXW4	147 aa		6.19	□□□□□ -1.42
CCM2-208	ENST00000476594	SND1-IT1	Q9HBX3	110 aa		6.19	□□□□□ -1.42
CCM2-208	ENST00000476594	MYMX	A0A1B0GTQ4	84 aa		6.18	□□□□□ -1.42
CCM2-208	ENST00000476594	RPL37AP8	A6NKH3	93 aa		6.18	□□□□□ -1.42
CCM2-208	ENST00000476594	S100A12	P80511	92 aa		6.17	□□□□□ -1.42
CCM2-208	ENST00000476594	PRR26	Q8N8Z3	221 aa		6.17	□□□□□ -1.42
CCM2-208	ENST00000476594	PLEKHB2	Q96CS7	222 aa		6.17	□□□□□ -1.42
CCM2-208	ENST00000476594	KRTAP4-8	Q9BYQ9	185 aa		6.17	□□□□□ -1.42
CCM2-208	ENST00000476594	IGKV2-28	A0A075B6P5	120 aa		6.16	□□□□□ -1.42
CCM2-208	ENST00000476594	COLCA2	A8K830	154 aa		6.16	□□□□□ -1.42
CCM2-208	ENST00000476594	DPM2	O94777	84 aa		6.16	□□□□□ -1.42
CCM2-208	ENST00000476594	IGKV2D-28	P01615	120 aa		6.16	□□□□□ -1.42
CCM2-208	ENST00000476594	VPREB1	P12018	145 aa		6.16	□□□□□ -1.42
CCM2-208	ENST00000476594	NDUFA12	Q9UI09	145 aa		6.16	□□□□□ -1.42
CCM2-208	ENST00000476594	FABP4	P15090	132 aa		6.15	□□□□□ -1.42
CCM2-208	ENST00000476594	NMU	P48645	174 aa		6.15	□□□□□ -1.42
CCM2-208	ENST00000476594		A0A0U1RRA0	63 aa		6.14	□□□□□ -1.43
CCM2-208	ENST00000476594	LEPROT	O15243	131 aa		6.14	□□□□□ -1.43
CCM2-208	ENST00000476594	IGKC	P01834	107 aa		6.14	□□□□□ -1.43
CCM2-208	ENST00000476594	KRTAP1-4	P0C5Y4	121 aa		6.14	□□□□□ -1.43
CCM2-208	ENST00000476594	FAM19A1	Q7Z5A9	133 aa		6.14	□□□□□ -1.43
CCM2-208	ENST00000476594	TMEM126A	Q9H061	195 aa		6.14	□□□□□ -1.43
CCM2-208	ENST00000476594	IGKV2D-26	A0A0A0MRZ7	120 aa		6.13	□□□□□ -1.43
CCM2-208	ENST00000476594		M0R378	163 aa		6.13	□□□□□ -1.43
CCM2-208	ENST00000476594	SMIM13	P0DJ93	91 aa		6.13	□□□□□ -1.43
CCM2-208	ENST00000476594	CRYGA	P11844	174 aa		6.13	□□□□□ -1.43
CCM2-208	ENST00000476594	LGALS3	P17931	250 aa	Known RBP	6.13	□□□□□ -1.43
CCM2-208	ENST00000476594	BOD1L2	Q8IYS8	172 aa		6.13	□□□□□ -1.43
CCM2-208	ENST00000476594	MIEN1	Q9BRT3	115 aa		6.13	□□□□□ -1.43
CCM2-208	ENST00000476594		J3QQQ9	107 aa		6.12	□□□□□ -1.43
CCM2-208	ENST00000476594	LINC00310	P59036	64 aa		6.12	□□□□□ -1.43
CCM2-208	ENST00000476594	MIR7-3HG	Q8N6C7	128 aa		6.12	□□□□□ -1.43
CCM2-208	ENST00000476594	SCO1	O75880	301 aa		6.11	□□□□□ -1.43
CCM2-208	ENST00000476594	PRY	O14603	147 aa		6.1	□□□□□ -1.43
CCM2-208	ENST00000476594	FAM229B	Q4G0N7	80 aa		6.1	□□□□□ -1.43
CCM2-208	ENST00000476594	TYMSOS	Q8TAI1	123 aa		6.1	□□□□□ -1.43
CCM2-208	ENST00000476594	TMEM238	C9JI98	176 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BK	O60814	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BJ	P06899	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BO	P23527	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BB	P33778	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BD	P58876	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BC	P62807	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	PRLH	P81277	87 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST2H2BE	Q16778	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	KRTAP13-1	Q8IUC0	172 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BH	Q93079	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BN	Q99877	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	HIST1H2BM	Q99879	126 aa		6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.09	□□□□□ -1.43
CCM2-208	ENST00000476594	ETDC	A0A1B0GVM5	59 aa		6.08	□□□□□ -1.44
CCM2-208	ENST00000476594	SYS1-DBNDD2	H3BUS1	97 aa		6.08	□□□□□ -1.44
CCM2-208	ENST00000476594	NCR3	O14931	201 aa		6.08	□□□□□ -1.44
CCM2-208	ENST00000476594	PMCHL2	Q9BQD1	86 aa		6.08	□□□□□ -1.44
CCM2-208	ENST00000476594	HIGD2A	Q9BW72	106 aa		6.08	□□□□□ -1.44
CCM2-208	ENST00000476594	CBY1	Q9Y3M2	126 aa		6.08	□□□□□ -1.44
CCM2-208	ENST00000476594	TRBV10-2	A0A0K0K1G8	114 aa		6.07	□□□□□ -1.44
CCM2-208	ENST00000476594		E9PLD3	99 aa		6.07	□□□□□ -1.44
CCM2-208	ENST00000476594	AKR1D1	P51857	326 aa		6.07	□□□□□ -1.44
CCM2-208	ENST00000476594	PET117	Q6UWS5	81 aa		6.07	□□□□□ -1.44
CCM2-208	ENST00000476594	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.07	□□□□□ -1.44
CCM2-208	ENST00000476594	LOC107984156	A0A0G2JMH3	177 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	KRTAP9-6	A0A140TA67	174 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	C20orf202	A1L168	122 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	TSPEAR-AS2	P59090	65 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	ARL17A	Q8IVW1	177 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	LINC00337	Q8N6G1	96 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	KCNQ1DN	Q9H478	68 aa		6.06	□□□□□ -1.44
CCM2-208	ENST00000476594	LRP2	P98164	4655 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594		A6NJY4	79 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594	NDUFC2	O95298	119 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594	DDT	P30046	118 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594	S100A7L2	Q5SY68	101 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594	LINC01545	Q5VT33	79 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594		Q8NDZ9	215 aa		6.05	□□□□□ -1.44
CCM2-208	ENST00000476594		A0A087X002	238 aa		6.04	□□□□□ -1.44
CCM2-208	ENST00000476594	TRBV10-3	A0A0K0K1G6	114 aa		6.04	□□□□□ -1.44
CCM2-208	ENST00000476594	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.04	□□□□□ -1.44
CCM2-208	ENST00000476594	CTAG1A	P78358	180 aa		6.04	□□□□□ -1.44
CCM2-208	ENST00000476594	PRR4	Q16378	134 aa		6.04	□□□□□ -1.44
CCM2-208	ENST00000476594	DAND5	Q8N907	189 aa		6.04	□□□□□ -1.44
CCM2-208	ENST00000476594	KRTAP9-2	Q9BYQ4	174 aa		6.04	□□□□□ -1.44
CCM2-208	ENST00000476594		A0A0J9YXY3	114 aa		6.03	□□□□□ -1.44
CCM2-208	ENST00000476594	JOSD1	Q15040	202 aa	Predicted RBP	6.03	□□□□□ -1.44
CCM2-208	ENST00000476594	COA6	Q5JTJ3	125 aa	Known RBP	6.03	□□□□□ -1.44
CCM2-208	ENST00000476594	LINC00304	Q8N9R0	145 aa		6.03	□□□□□ -1.44
CCM2-208	ENST00000476594	SPRR1A	P35321	89 aa		6.02	□□□□□ -1.45
CCM2-208	ENST00000476594	HINT1	P49773	126 aa	Predicted RBP	6.02	□□□□□ -1.45
CCM2-208	ENST00000476594	KRTDAP	P60985	99 aa		6.02	□□□□□ -1.45

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