RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ODF3BA8MYP8 253 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 COX7A1P24310 79 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 DSCR9P59020 149 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 SPINK14Q6IE38 97 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 LYPD2Q6UXB3 125 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 C9orf163Q8N9P6 203 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 KNL1Q8NG31 2342 aa2.69□□□□□ -1.98
CD55-208ENST00000476590 LINC00959A0A1B0GUT2 108 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 DEFB103AP81534 67 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 COX17Q14061 63 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 MINOS1Q5TGZ0 78 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 XAGE1AQ9HD64 81 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 CR1P17927 2039 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 DPM3Q9P2X0 92 aa2.68□□□□□ -1.98
CD55-208ENST00000476590 FBN3Q75N90 2809 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 MED13LQ71F56 2210 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 CHTF8P0CG12 524 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 ABCA2Q9BZC7 2435 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 IGHV3-11P01762 117 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 DSCR10P59022 87 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 KPRPQ5T749 579 aaPredicted RBP2.67□□□□□ -1.98
CD55-208ENST00000476590 Q8IZM0 81 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 CNEP1R1Q8N9A8 125 aa2.67□□□□□ -1.98
CD55-208ENST00000476590 DNAH12Q6ZR08 3092 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 A8MTW9 85 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 IGLV6-57P01721 117 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 DOPEY2Q9Y3R5 2298 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 LY6G6EA0A0G2JKS1 128 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 KRTAP16-1A8MUX0 517 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 K7EQZ3 153 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 SPINK13Q1W4C9 94 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 DHRS4-AS1Q9P1J3 65 aa2.66□□□□□ -1.98
CD55-208ENST00000476590 MGAQ8IWI9 3026 aa2.65□□□□□ -1.99
CD55-208ENST00000476590 IGKV3-7A0A075B6H7 116 aa2.65□□□□□ -1.99
CD55-208ENST00000476590 IGKV2D-24A0A075B6R9 120 aa2.65□□□□□ -1.99
CD55-208ENST00000476590 RHPN1-AS1Q9BWJ2 59 aa2.65□□□□□ -1.99
CD55-208ENST00000476590 TRANK1O15050 2925 aa2.65□□□□□ -1.99
CD55-208ENST00000476590 ASXL3Q9C0F0 2248 aa2.65□□□□□ -1.99
CD55-208ENST00000476590 SZT2Q5T011 3432 aa2.64□□□□□ -1.99
CD55-208ENST00000476590 IGLV1-50A0A075B6I6 118 aa2.64□□□□□ -1.99
CD55-208ENST00000476590 EGFEM1PQ0D2K5 195 aa2.64□□□□□ -1.99
CD55-208ENST00000476590 IGKV3-20P01619 116 aa2.64□□□□□ -1.99
CD55-208ENST00000476590 CSNK1G2-AS1Q8NCQ2 148 aa2.64□□□□□ -1.99
CD55-208ENST00000476590 Q8NDZ9 215 aa2.64□□□□□ -1.99
CD55-208ENST00000476590 USP9XQ93008 2570 aaPredicted RBP2.63□□□□□ -1.99
CD55-208ENST00000476590 IGLV5-48A0A075B6I7 105 aa2.63□□□□□ -1.99
CD55-208ENST00000476590 IGKV3OR2-268A0A0C4DH90 116 aa2.63□□□□□ -1.99
CD55-208ENST00000476590 P0C880 135 aa2.63□□□□□ -1.99
CD55-208ENST00000476590 SDK1Q7Z5N4 2213 aa2.63□□□□□ -1.99
CD55-208ENST00000476590 SETXQ7Z333 2677 aaKnown RBP2.63□□□□□ -1.99
CD55-208ENST00000476590 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
CD55-208ENST00000476590 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
CD55-208ENST00000476590 G3V318 75 aa2.62□□□□□ -1.99
CD55-208ENST00000476590 HTN1P15515 57 aa2.62□□□□□ -1.99
CD55-208ENST00000476590 CMC4P56277 68 aaPredicted RBP2.62□□□□□ -1.99
CD55-208ENST00000476590 WFDC13Q8IUB5 93 aa2.62□□□□□ -1.99
CD55-208ENST00000476590 DEFB119Q8N690 84 aa2.62□□□□□ -1.99
CD55-208ENST00000476590 Q8NBF4 154 aa2.62□□□□□ -1.99
CD55-208ENST00000476590 PRO3102Q9H379 93 aa2.62□□□□□ -1.99
CD55-208ENST00000476590 HRES1P13985 223 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 USP34Q70CQ2 3546 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 ABCA4P78363 2273 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 ICE1Q9Y2F5 2266 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 XIRP2A4UGR9 3374 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 KRTAP4-16G5E9R7 235 aaPredicted RBP2.61□□□□□ -1.99
CD55-208ENST00000476590 ZNF861PO60384 105 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 INSP01308 110 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 MINOS1-NBL1R4GNA1 71 aa2.61□□□□□ -1.99
CD55-208ENST00000476590 ANKRD17O75179 2603 aaKnown RBP2.61□□□□□ -1.99
CD55-208ENST00000476590 DEFB131BA0A096LNP1 70 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 DEFB116Q30KQ4 102 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 LINC00483Q53H64 154 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 WFDC10BQ8IUB3 73 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 USMG5Q96IX5 58 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 PRR34Q9NV39 138 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 UQCR11O14957 56 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 MSMBP08118 114 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 WNK2Q9Y3S1 2297 aa2.6□□□□□ -1.99
CD55-208ENST00000476590 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
CD55-208ENST00000476590 UNC80Q8N2C7 3258 aa2.59□□□□□ -1.99
CD55-208ENST00000476590 TEP1Q99973 2627 aaKnown RBP2.59□□□□□ -2
CD55-208ENST00000476590 H3BUA1 57 aa2.59□□□□□ -2
CD55-208ENST00000476590 U3KQA8 63 aa2.59□□□□□ -2
CD55-208ENST00000476590 ATRXP46100 2492 aa2.58□□□□□ -2
CD55-208ENST00000476590 EP400Q96L91 3159 aa2.58□□□□□ -2
CD55-208ENST00000476590 A0A087WSZ3 146 aa2.58□□□□□ -2
CD55-208ENST00000476590 A0A1B0GU69 56 aa2.58□□□□□ -2
CD55-208ENST00000476590 A8MWP4 228 aa2.58□□□□□ -2
CD55-208ENST00000476590 PCOTHQ58A44 107 aa2.58□□□□□ -2
CD55-208ENST00000476590 NBEAQ8NFP9 2946 aa2.58□□□□□ -2
CD55-208ENST00000476590 RANBP2P49792 3224 aaKnown RBP2.57□□□□□ -2
CD55-208ENST00000476590 TECTAO75443 2155 aa2.57□□□□□ -2
CD55-208ENST00000476590 Q8N377 158 aa2.57□□□□□ -2
CD55-208ENST00000476590 C7orf33Q8WU49 177 aa2.57□□□□□ -2
CD55-208ENST00000476590 C20orf166-AS1Q96NR2 134 aa2.57□□□□□ -2
CD55-208ENST00000476590 C8orf17Q9NRJ1 99 aa2.57□□□□□ -2
CD55-208ENST00000476590 SETD2Q9BYW2 2564 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms