RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 TSPEAR-AS2P59090 65 aa4.15□□□□□ -1.75
CLDN4-205ENST00000476494 ZNF625Q96I27 306 aaPredicted RBP4.15□□□□□ -1.75
CLDN4-205ENST00000476494 C2orf48Q96LS8 159 aa4.15□□□□□ -1.75
CLDN4-205ENST00000476494 TOMM7Q9P0U1 55 aa4.15□□□□□ -1.75
CLDN4-205ENST00000476494 GVQW2A0A096LPI5 108 aaPredicted RBP4.14□□□□□ -1.75
CLDN4-205ENST00000476494 M0R143 59 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 PSCAO43653 123 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 HSD52Q0P140 79 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 COX17Q14061 63 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 WFDC2Q14508 124 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 KIAA0087Q14695 138 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 LINC01620Q4KN68 170 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 C2orf91Q6ZV80 131 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 TTTY13Q9BZ97 58 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 PPDPFQ9H3Y8 114 aa4.14□□□□□ -1.75
CLDN4-205ENST00000476494 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
CLDN4-205ENST00000476494 IFITM1P13164 125 aa4.13□□□□□ -1.75
CLDN4-205ENST00000476494 PTTG1IPP53801 180 aa4.13□□□□□ -1.75
CLDN4-205ENST00000476494 CTAG1AP78358 180 aa4.13□□□□□ -1.75
CLDN4-205ENST00000476494 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
CLDN4-205ENST00000476494 HIST1H4GQ99525 98 aa4.13□□□□□ -1.75
CLDN4-205ENST00000476494 TP73-AS1Q9UF72 201 aa4.13□□□□□ -1.75
CLDN4-205ENST00000476494 TRBV30A0A0K0K1B3 111 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 TMEM238LA0A1B0GVL6 79 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 A6NJY4 79 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 PANO1I0J062 215 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 MEIG1Q5JSS6 88 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 C15orf56Q8N910 161 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 SPANXDQ9BXN6 97 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 ERG28Q9UKR5 140 aa4.12□□□□□ -1.75
CLDN4-205ENST00000476494 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
CLDN4-205ENST00000476494 LINC00158P58513 81 aa4.11□□□□□ -1.75
CLDN4-205ENST00000476494 RPL24P83731 157 aaKnown RBP4.11□□□□□ -1.75
CLDN4-205ENST00000476494 SYCNQ0VAF6 134 aa4.11□□□□□ -1.75
CLDN4-205ENST00000476494 LBHQ53QV2 105 aaPredicted RBP4.11□□□□□ -1.75
CLDN4-205ENST00000476494 CAMK2N2Q96S95 79 aa4.11□□□□□ -1.75
CLDN4-205ENST00000476494 LITAFQ99732 161 aa4.11□□□□□ -1.75
CLDN4-205ENST00000476494 PKIGQ9Y2B9 76 aa4.11□□□□□ -1.75
CLDN4-205ENST00000476494 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
CLDN4-205ENST00000476494 A6NDN8 102 aa4.1□□□□□ -1.75
CLDN4-205ENST00000476494 BVES-AS1Q5T3Y7 98 aa4.1□□□□□ -1.75
CLDN4-205ENST00000476494 C2orf82Q6UX34 121 aa4.1□□□□□ -1.75
CLDN4-205ENST00000476494 UNQ6190/PRO20217Q6UXQ8 127 aa4.1□□□□□ -1.75
CLDN4-205ENST00000476494 CEND1Q8N111 149 aa4.1□□□□□ -1.75
CLDN4-205ENST00000476494 LOC107984156A0A0G2JMH3 177 aa4.09□□□□□ -1.75
CLDN4-205ENST00000476494 SMIM13P0DJ93 91 aa4.09□□□□□ -1.75
CLDN4-205ENST00000476494 HINT1P49773 126 aaPredicted RBP4.09□□□□□ -1.75
CLDN4-205ENST00000476494 CNBPP62633 177 aaKnown RBP4.09□□□□□ -1.75
CLDN4-205ENST00000476494 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
CLDN4-205ENST00000476494 ADAMTSL4-AS1Q5T5F5 129 aa4.09□□□□□ -1.75
CLDN4-205ENST00000476494 ARL17AQ8IVW1 177 aa4.09□□□□□ -1.75
CLDN4-205ENST00000476494 CARD19Q96LW7 228 aa4.09□□□□□ -1.75
CLDN4-205ENST00000476494 TLX1NBP0CAT3 122 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 PFN2P35080 140 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 COL5A1-AS1Q5SY13 56 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 C10orf25Q5T742 122 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 MUSTN1Q8IVN3 82 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 MIR7-3HGQ8N6C7 128 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 LINC00308Q8TCZ7 52 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
CLDN4-205ENST00000476494 NDUFC2-KCTD14E9PQ53 114 aa4.07□□□□□ -1.76
CLDN4-205ENST00000476494 NDUFC2O95298 119 aa4.07□□□□□ -1.76
CLDN4-205ENST00000476494 LINC00526Q96FQ7 95 aa4.07□□□□□ -1.76
CLDN4-205ENST00000476494 SNHG12Q9BXW3 62 aa4.07□□□□□ -1.76
CLDN4-205ENST00000476494 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 A0A0U1RRA0 63 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 LOC107984640A0A0U1RRK4 108 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 A4D1N5 150 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 LECT2O14960 151 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 FXYD2P54710 66 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 BATFQ16520 125 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 SND1-IT1Q9HBX3 110 aa4.06□□□□□ -1.76
CLDN4-205ENST00000476494 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
CLDN4-205ENST00000476494 SLPIP03973 132 aa4.05□□□□□ -1.76
CLDN4-205ENST00000476494 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
CLDN4-205ENST00000476494 DAND5Q8N907 189 aa4.05□□□□□ -1.76
CLDN4-205ENST00000476494 RAB37Q96AX2 223 aa4.05□□□□□ -1.76
CLDN4-205ENST00000476494 LINC00474Q9P2X8 69 aa4.05□□□□□ -1.76
CLDN4-205ENST00000476494 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
CLDN4-205ENST00000476494 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.04□□□□□ -1.76
CLDN4-205ENST00000476494 TRBV10-2A0A0K0K1G8 114 aa4.04□□□□□ -1.76
CLDN4-205ENST00000476494 CFC1BP0CG36 223 aa4.04□□□□□ -1.76
CLDN4-205ENST00000476494 CFC1P0CG37 223 aa4.04□□□□□ -1.76
CLDN4-205ENST00000476494 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
CLDN4-205ENST00000476494 C9orf163Q8N9P6 203 aa4.04□□□□□ -1.76
CLDN4-205ENST00000476494 NHP2Q9NX24 153 aaKnown RBP4.04□□□□□ -1.76
CLDN4-205ENST00000476494 CBY1Q9Y3M2 126 aa4.04□□□□□ -1.76
CLDN4-205ENST00000476494 NPC2P61916 151 aa4.03□□□□□ -1.76
CLDN4-205ENST00000476494 Q6ZRP5 223 aa4.03□□□□□ -1.76
CLDN4-205ENST00000476494 EIF4EBP3O60516 100 aaPredicted RBP4.02□□□□□ -1.77
CLDN4-205ENST00000476494 RPL18AQ02543 176 aaKnown RBP4.02□□□□□ -1.77
CLDN4-205ENST00000476494 GAGE2EQ4V326 116 aa4.02□□□□□ -1.77
CLDN4-205ENST00000476494 TMEM126AQ9H061 195 aa4.02□□□□□ -1.77
CLDN4-205ENST00000476494 GAGE2DQ9UEU5 116 aa4.02□□□□□ -1.77
CLDN4-205ENST00000476494 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms