RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	IGLV7-46	A0A075B6I9	117 aa		4.18	□□□□□ -1.74
HDAC9-223	ENST00000476135	ATP5L	O75964	103 aa		4.18	□□□□□ -1.74
HDAC9-223	ENST00000476135	OR10D4P	Q8NGN7	298 aa		4.18	□□□□□ -1.74
HDAC9-223	ENST00000476135	CARD19	Q96LW7	228 aa		4.18	□□□□□ -1.74
HDAC9-223	ENST00000476135		A0A087WZ39	114 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	LOC107984640	A0A0U1RRK4	108 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	HERVK_113	P63121	156 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	MT1H	P80294	61 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	RPL24	P83731	157 aa	Known RBP	4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	PMVK	Q15126	192 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	PMCHL1	Q16048	86 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	LINC00242	Q5T6M2	205 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	LINC00173	Q6ZV60	143 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	PHF5A	Q7RTV0	110 aa	Known RBP	4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	C5orf38	Q86SI9	138 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	FAM104A	Q969W3	186 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135	RETNLB	Q9BQ08	111 aa		4.17	□□□□□ -1.74
HDAC9-223	ENST00000476135		A0A096LNJ9	63 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	TINCR	A0A1B0GVN0	87 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	SERF1A	O75920	110 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	NDUFA6	P56556	154 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	KRTAP10-6	P60371	365 aa	Predicted RBP	4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	KRTAP10-7	P60409	375 aa	Predicted RBP	4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	SPAG11B	Q08648	103 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	C9orf116	Q5BN46	136 aa	Predicted RBP	4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	PDZD11	Q5EBL8	140 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	FAM19A3	Q7Z5A8	133 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	LINC01561	Q8N1V8	128 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	ORAOV1	Q8WV07	137 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	PACRG	Q96M98	296 aa	Predicted RBP	4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	KRTAP2-2	Q9BYT5	123 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135	CST9L	Q9H4G1	147 aa		4.16	□□□□□ -1.74
HDAC9-223	ENST00000476135		H3BRM9	83 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BK	O60814	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	LEPROTL1	O95214	131 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BJ	P06899	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	PRSS2	P07478	247 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BO	P23527	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BB	P33778	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BD	P58876	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BC	P62807	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST2H2BE	Q16778	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	ZC2HC1B	Q5TFG8	222 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135		Q6ZVQ6	151 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BH	Q93079	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	C2orf48	Q96LS8	159 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BN	Q99877	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HIST1H2BM	Q99879	126 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	HSPB8	Q9UJY1	196 aa		4.15	□□□□□ -1.75
HDAC9-223	ENST00000476135	IGLV4-69	A0A075B6H9	119 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	IGLC3	P0DOY3	106 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	SYCN	Q0VAF6	134 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	VAMP3	Q15836	100 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	TYMSOS	Q8TAI1	123 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	IFI27L1	Q96BM0	104 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	CAMK2N2	Q96S95	79 aa		4.14	□□□□□ -1.75
HDAC9-223	ENST00000476135	IGLV5-45	A0A087WSX0	123 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	TRAV12-1	A0A0B4J245	112 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	NDUFA1	O15239	70 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	C10orf25	Q5T742	122 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	KRTAP11-1	Q8IUC1	163 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	FAM19A2	Q8N3H0	131 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	PPDPF	Q9H3Y8	114 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	CDKN2A-AS1	Q9UH64	79 aa		4.13	□□□□□ -1.75
HDAC9-223	ENST00000476135	SMIM1	B2RUZ4	78 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135	CXCL5	P42830	114 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135	CKS1B	P61024	79 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135		Q8IZM0	81 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135	LINC00526	Q96FQ7	95 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135	MAP1LC3C	Q9BXW4	147 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135	TOMM7	Q9P0U1	55 aa		4.12	□□□□□ -1.75
HDAC9-223	ENST00000476135		A0A087X002	238 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	IGLV9-49	A0A0B4J1Y8	123 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	TRBV30	A0A0K0K1B3	111 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135		F8VRH5	84 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	FABP4	P15090	132 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	ZNF22	P17026	224 aa	Predicted RBP	4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	PLN	P26678	52 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	KRTAP19-2	Q3LHN2	52 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	TMEM170B	Q5T4T1	132 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	LINC00337	Q8N6G1	96 aa		4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	MRPL35	Q9NZE8	188 aa	Known RBP	4.11	□□□□□ -1.75
HDAC9-223	ENST00000476135	IGLV5-37	A0A075B6J1	123 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	IGLV5-39	A0A0G2JS06	123 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	C11orf86	A6NJI1	115 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	SPINK8	P0C7L1	97 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	RPL18A	Q02543	176 aa	Known RBP	4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	KIAA0087	Q14695	138 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	COA6	Q5JTJ3	125 aa	Known RBP	4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	SFTA2	Q6UW10	78 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	COX7B2	Q8TF08	81 aa		4.1	□□□□□ -1.75
HDAC9-223	ENST00000476135	C20orf202	A1L168	122 aa		4.09	□□□□□ -1.75
HDAC9-223	ENST00000476135	NUPR1	O60356	82 aa		4.09	□□□□□ -1.75
HDAC9-223	ENST00000476135	ZNF861P	O60384	105 aa		4.09	□□□□□ -1.75
HDAC9-223	ENST00000476135	DPM2	O94777	84 aa		4.09	□□□□□ -1.75
HDAC9-223	ENST00000476135	HERVK_113	P61574	105 aa		4.09	□□□□□ -1.75
HDAC9-223	ENST00000476135	KRTAP5-11	Q6L8G4	156 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms