RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
NUDCD3-206ENST00000475952 SLC7A5P1Q8MH63 180 aa6.83□□□□□ -1.32
NUDCD3-206ENST00000475952 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
NUDCD3-206ENST00000475952 SERF1AO75920 110 aa6.82□□□□□ -1.32
NUDCD3-206ENST00000475952 VPREB1P12018 145 aa6.82□□□□□ -1.32
NUDCD3-206ENST00000475952 UBE2AP49459 152 aa6.82□□□□□ -1.32
NUDCD3-206ENST00000475952 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
NUDCD3-206ENST00000475952 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
NUDCD3-206ENST00000475952 ATP6V1G1O75348 118 aa6.81□□□□□ -1.32
NUDCD3-206ENST00000475952 SCO1O75880 301 aa6.81□□□□□ -1.32
NUDCD3-206ENST00000475952 LINC00158P58513 81 aa6.81□□□□□ -1.32
NUDCD3-206ENST00000475952 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
NUDCD3-206ENST00000475952 HSPB8Q9UJY1 196 aa6.81□□□□□ -1.32
NUDCD3-206ENST00000475952 LINC00310P59036 64 aa6.8□□□□□ -1.32
NUDCD3-206ENST00000475952 HERV-K104P63124 156 aa6.8□□□□□ -1.32
NUDCD3-206ENST00000475952 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
NUDCD3-206ENST00000475952 COLCA2A8K830 154 aa6.79□□□□□ -1.32
NUDCD3-206ENST00000475952 LINC00587B1AMM8 73 aa6.79□□□□□ -1.32
NUDCD3-206ENST00000475952 PLNP26678 52 aa6.79□□□□□ -1.32
NUDCD3-206ENST00000475952 KRTAP13-1Q8IUC0 172 aa6.79□□□□□ -1.32
NUDCD3-206ENST00000475952 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
NUDCD3-206ENST00000475952 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
NUDCD3-206ENST00000475952 TMEM126AQ9H061 195 aa6.78□□□□□ -1.32
NUDCD3-206ENST00000475952 NDUFA12Q9UI09 145 aa6.78□□□□□ -1.32
NUDCD3-206ENST00000475952 CRYGAP11844 174 aa6.77□□□□□ -1.33
NUDCD3-206ENST00000475952 FABP4P15090 132 aa6.77□□□□□ -1.33
NUDCD3-206ENST00000475952 HERVK_113P61574 105 aa6.77□□□□□ -1.33
NUDCD3-206ENST00000475952 PRLHP81277 87 aa6.77□□□□□ -1.33
NUDCD3-206ENST00000475952 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
NUDCD3-206ENST00000475952 MAP1LC3CQ9BXW4 147 aa6.77□□□□□ -1.33
NUDCD3-206ENST00000475952 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
NUDCD3-206ENST00000475952 DPM2O94777 84 aa6.76□□□□□ -1.33
NUDCD3-206ENST00000475952 BOD1L2Q8IYS8 172 aa6.76□□□□□ -1.33
NUDCD3-206ENST00000475952 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
NUDCD3-206ENST00000475952 Q8NDZ9 215 aa6.76□□□□□ -1.33
NUDCD3-206ENST00000475952 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
NUDCD3-206ENST00000475952 A0A087X002 238 aa6.75□□□□□ -1.33
NUDCD3-206ENST00000475952 A6NJY4 79 aa6.75□□□□□ -1.33
NUDCD3-206ENST00000475952 M0R378 163 aa6.75□□□□□ -1.33
NUDCD3-206ENST00000475952 LEPROTO15243 131 aa6.75□□□□□ -1.33
NUDCD3-206ENST00000475952 IGKCP01834 107 aa6.75□□□□□ -1.33
NUDCD3-206ENST00000475952 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
NUDCD3-206ENST00000475952 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
NUDCD3-206ENST00000475952 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
NUDCD3-206ENST00000475952 TYMSOSQ8TAI1 123 aa6.74□□□□□ -1.33
NUDCD3-206ENST00000475952 J3QQQ9 107 aa6.73□□□□□ -1.33
NUDCD3-206ENST00000475952 PRYO14603 147 aa6.73□□□□□ -1.33
NUDCD3-206ENST00000475952 NCR3O14931 201 aa6.73□□□□□ -1.33
NUDCD3-206ENST00000475952 LGALS3P17931 250 aaKnown RBP6.73□□□□□ -1.33
NUDCD3-206ENST00000475952 NMUP48645 174 aa6.73□□□□□ -1.33
NUDCD3-206ENST00000475952 PMCHL2Q9BQD1 86 aa6.73□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 S100A12P80511 92 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
NUDCD3-206ENST00000475952 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
NUDCD3-206ENST00000475952 DAND5Q8N907 189 aa6.7□□□□□ -1.34
NUDCD3-206ENST00000475952 ANAPC11Q9NYG5 84 aa6.7□□□□□ -1.34
NUDCD3-206ENST00000475952 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 SYS1-DBNDD2H3BUS1 97 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 TSPAN13O95857 204 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 PRR4Q16378 134 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
NUDCD3-206ENST00000475952 TRBV10-3A0A0K0K1G6 114 aa6.68□□□□□ -1.34
NUDCD3-206ENST00000475952 ETDCA0A1B0GVM5 59 aa6.68□□□□□ -1.34
NUDCD3-206ENST00000475952 E9PLD3 99 aa6.68□□□□□ -1.34
NUDCD3-206ENST00000475952 LINC00304Q8N9R0 145 aa6.68□□□□□ -1.34
NUDCD3-206ENST00000475952 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
NUDCD3-206ENST00000475952 SPRR1AP35321 89 aa6.67□□□□□ -1.34
NUDCD3-206ENST00000475952 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
NUDCD3-206ENST00000475952 SPANXB1Q9NS25 103 aaPredicted RBP6.67□□□□□ -1.34
NUDCD3-206ENST00000475952 DDTP30046 118 aa6.66□□□□□ -1.34
NUDCD3-206ENST00000475952 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
NUDCD3-206ENST00000475952 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
NUDCD3-206ENST00000475952 A0A0U1RQV1 116 aa6.65□□□□□ -1.34
NUDCD3-206ENST00000475952 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
NUDCD3-206ENST00000475952 NDUFC2O95298 119 aa6.65□□□□□ -1.34
NUDCD3-206ENST00000475952 LINC01545Q5VT33 79 aa6.65□□□□□ -1.34
NUDCD3-206ENST00000475952 PET117Q6UWS5 81 aa6.65□□□□□ -1.34
NUDCD3-206ENST00000475952 NPC2P61916 151 aa6.64□□□□□ -1.35
NUDCD3-206ENST00000475952 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
NUDCD3-206ENST00000475952 CTAG1AP78358 180 aa6.62□□□□□ -1.35
NUDCD3-206ENST00000475952 COA6Q5JTJ3 125 aaKnown RBP6.62□□□□□ -1.35
NUDCD3-206ENST00000475952 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
NUDCD3-206ENST00000475952 SMCR5Q8TEV8 140 aa6.62□□□□□ -1.35
NUDCD3-206ENST00000475952 TRAV23DV6A0A075B6W5 121 aa6.61□□□□□ -1.35
NUDCD3-206ENST00000475952 ZNF815PA8K554 130 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms