RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 F8WEM9 126 aa9□□□□□ -0.97
CCNL1-216ENST00000475298 BCE1O60756 84 aa9□□□□□ -0.97
CCNL1-216ENST00000475298 IGLV4-60A0A075B6I1 120 aa8.99□□□□□ -0.97
CCNL1-216ENST00000475298 TRAV10A0A0B4J240 114 aa8.99□□□□□ -0.97
CCNL1-216ENST00000475298 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
CCNL1-216ENST00000475298 A0A0U1RQV1 116 aa8.99□□□□□ -0.97
CCNL1-216ENST00000475298 JMJD7-PLA2G4BH0Y9G9 81 aa8.99□□□□□ -0.97
CCNL1-216ENST00000475298 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
CCNL1-216ENST00000475298 C1orf195Q5TG92 126 aa8.98□□□□□ -0.97
CCNL1-216ENST00000475298 V9GYY9 64 aa8.98□□□□□ -0.97
CCNL1-216ENST00000475298 LY6G6DO95868 133 aa8.97□□□□□ -0.97
CCNL1-216ENST00000475298 LINC00158P58513 81 aa8.97□□□□□ -0.97
CCNL1-216ENST00000475298 LINC00482Q8N8I6 264 aa8.97□□□□□ -0.97
CCNL1-216ENST00000475298 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
CCNL1-216ENST00000475298 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
CCNL1-216ENST00000475298 TRBV6-8A0A0A6YYG3 113 aa8.97□□□□□ -0.97
CCNL1-216ENST00000475298 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
CCNL1-216ENST00000475298 NSD1Q96L73 2696 aaPredicted RBP8.95□□□□□ -0.98
CCNL1-216ENST00000475298 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
CCNL1-216ENST00000475298 A0A096LPF7 62 aa8.94□□□□□ -0.98
CCNL1-216ENST00000475298 PAX4O43316 350 aa8.94□□□□□ -0.98
CCNL1-216ENST00000475298 Q8N814 137 aa8.94□□□□□ -0.98
CCNL1-216ENST00000475298 X6R8D5 127 aa8.93□□□□□ -0.98
CCNL1-216ENST00000475298 TMEM256-PLSCR3K7ERE1 68 aa8.93□□□□□ -0.98
CCNL1-216ENST00000475298 DEFB4AO15263 64 aa8.93□□□□□ -0.98
CCNL1-216ENST00000475298 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
CCNL1-216ENST00000475298 INAFM1C9JVW0 142 aa8.92□□□□□ -0.98
CCNL1-216ENST00000475298 GYPEP15421 78 aa8.92□□□□□ -0.98
CCNL1-216ENST00000475298 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
CCNL1-216ENST00000475298 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
CCNL1-216ENST00000475298 M0R2N4 97 aa8.92□□□□□ -0.98
CCNL1-216ENST00000475298 NANOS2P60321 138 aaKnown RBP8.92□□□□□ -0.98
CCNL1-216ENST00000475298 ATRQ13535 2644 aa8.92□□□□□ -0.98
CCNL1-216ENST00000475298 TRRAPQ9Y4A5 3859 aa8.91□□□□□ -0.98
CCNL1-216ENST00000475298 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
CCNL1-216ENST00000475298 CLPSL2Q6UWE3 100 aa8.91□□□□□ -0.98
CCNL1-216ENST00000475298 Q6ZQT0 140 aa8.9□□□□□ -0.98
CCNL1-216ENST00000475298 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.99
CCNL1-216ENST00000475298 LINC00612Q8N6U2 182 aa8.9□□□□□ -0.99
CCNL1-216ENST00000475298 TM2D3Q9BRN9 247 aa8.9□□□□□ -0.99
CCNL1-216ENST00000475298 C11orf68Q9H3H3 251 aaKnown RBP8.9□□□□□ -0.99
CCNL1-216ENST00000475298 NDUFC1O43677 76 aa8.89□□□□□ -0.99
CCNL1-216ENST00000475298 DEFB135Q30KP9 77 aa8.89□□□□□ -0.99
CCNL1-216ENST00000475298 HIVEP1P15822 2718 aa8.88□□□□□ -0.99
CCNL1-216ENST00000475298 LINC00959A0A1B0GUT2 108 aa8.88□□□□□ -0.99
CCNL1-216ENST00000475298 ATP5EP56381 51 aaPredicted RBP8.88□□□□□ -0.99
CCNL1-216ENST00000475298 Q6ZVQ6 151 aa8.88□□□□□ -0.99
CCNL1-216ENST00000475298 HAMPP81172 84 aa8.87□□□□□ -0.99
CCNL1-216ENST00000475298 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
CCNL1-216ENST00000475298 A0A087WZ39 114 aa8.86□□□□□ -0.99
CCNL1-216ENST00000475298 MIFP14174 115 aa8.86□□□□□ -0.99
CCNL1-216ENST00000475298 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
CCNL1-216ENST00000475298 Q8N3U1 123 aa8.86□□□□□ -0.99
CCNL1-216ENST00000475298 TEP1Q99973 2627 aaKnown RBP8.86□□□□□ -0.99
CCNL1-216ENST00000475298 PRO0255Q9UI72 69 aa8.86□□□□□ -0.99
CCNL1-216ENST00000475298 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
CCNL1-216ENST00000475298 C9orf66Q5T8R8 295 aa8.85□□□□□ -0.99
CCNL1-216ENST00000475298 CXCL6P80162 114 aa8.84□□□□□ -0.99
CCNL1-216ENST00000475298 IGHV4-28A0A0C4DH34 117 aa8.83□□□□□ -1
CCNL1-216ENST00000475298 CELA1Q9UNI1 258 aa8.83□□□□□ -1
CCNL1-216ENST00000475298 C6orf226Q5I0X4 101 aa8.82□□□□□ -1
CCNL1-216ENST00000475298 C6orf223Q8N319 242 aa8.81□□□□□ -1
CCNL1-216ENST00000475298 IGLV10-54A0A075B6I4 117 aa8.81□□□□□ -1
CCNL1-216ENST00000475298 A0A1B0GUV1 79 aa8.81□□□□□ -1
CCNL1-216ENST00000475298 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
CCNL1-216ENST00000475298 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
CCNL1-216ENST00000475298 LYRM9A8MSI8 78 aa8.8□□□□□ -1
CCNL1-216ENST00000475298 NREPQ16612 68 aa8.8□□□□□ -1
CCNL1-216ENST00000475298 ZNF561-AS1K7EIQ3 104 aa8.8□□□□□ -1
CCNL1-216ENST00000475298 DAD1P61803 113 aa8.79□□□□□ -1
CCNL1-216ENST00000475298 HTN3P15516 51 aa8.79□□□□□ -1
CCNL1-216ENST00000475298 C6orf99Q4VX62 202 aa8.79□□□□□ -1
CCNL1-216ENST00000475298 LINC00575Q6W349 94 aa8.79□□□□□ -1
CCNL1-216ENST00000475298 SCXQ7RTU7 201 aa8.78□□□□□ -1
CCNL1-216ENST00000475298 ANGP03950 147 aaKnown RBP8.78□□□□□ -1
CCNL1-216ENST00000475298 APOC4P55056 127 aa8.78□□□□□ -1
CCNL1-216ENST00000475298 ESRGQ1W209 222 aa8.78□□□□□ -1
CCNL1-216ENST00000475298 Q8NAQ8 132 aa8.78□□□□□ -1
CCNL1-216ENST00000475298 Q6ZTC4 211 aa8.77□□□□□ -1.01
CCNL1-216ENST00000475298 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
CCNL1-216ENST00000475298 ERC2-IT1O76042 136 aa8.77□□□□□ -1.01
CCNL1-216ENST00000475298 Q8IZM0 81 aa8.76□□□□□ -1.01
CCNL1-216ENST00000475298 Q8NDZ9 215 aa8.76□□□□□ -1.01
CCNL1-216ENST00000475298 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
CCNL1-216ENST00000475298 BPY2O14599 106 aa8.76□□□□□ -1.01
CCNL1-216ENST00000475298 REG3AQ06141 175 aa8.75□□□□□ -1.01
CCNL1-216ENST00000475298 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
CCNL1-216ENST00000475298 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
CCNL1-216ENST00000475298 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
CCNL1-216ENST00000475298 PMAIP1Q13794 54 aa8.74□□□□□ -1.01
CCNL1-216ENST00000475298 KIAA0087Q14695 138 aa8.74□□□□□ -1.01
CCNL1-216ENST00000475298 PRYO14603 147 aa8.73□□□□□ -1.01
CCNL1-216ENST00000475298 CD164L2Q6UWJ8 174 aa8.73□□□□□ -1.01
CCNL1-216ENST00000475298 MUC7Q8TAX7 377 aa8.73□□□□□ -1.01
CCNL1-216ENST00000475298 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCNL1-216ENST00000475298 Q6ZRU5 148 aa8.72□□□□□ -1.01
CCNL1-216ENST00000475298 PKD1L1Q8TDX9 2849 aa8.72□□□□□ -1.01
CCNL1-216ENST00000475298 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
CCNL1-216ENST00000475298 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.01
CCNL1-216ENST00000475298 PDE6GP18545 87 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms