RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 H3BRM9 83 aa7.14□□□□□ -1.27
SKA3-206ENST00000475251 SCO1O75880 301 aa7.14□□□□□ -1.27
SKA3-206ENST00000475251 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
SKA3-206ENST00000475251 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
SKA3-206ENST00000475251 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
SKA3-206ENST00000475251 A0A1B0GVG6 124 aa7.13□□□□□ -1.27
SKA3-206ENST00000475251 M0R378 163 aa7.13□□□□□ -1.27
SKA3-206ENST00000475251 VPREB1P12018 145 aa7.13□□□□□ -1.27
SKA3-206ENST00000475251 PFN2P35080 140 aa7.13□□□□□ -1.27
SKA3-206ENST00000475251 SPINK1P00995 79 aa7.12□□□□□ -1.27
SKA3-206ENST00000475251 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
SKA3-206ENST00000475251 COX17Q14061 63 aa7.12□□□□□ -1.27
SKA3-206ENST00000475251 SPRR4Q96PI1 79 aa7.12□□□□□ -1.27
SKA3-206ENST00000475251 ANAPC16Q96DE5 110 aa7.11□□□□□ -1.27
SKA3-206ENST00000475251 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
SKA3-206ENST00000475251 SND1-IT1Q9HBX3 110 aa7.11□□□□□ -1.27
SKA3-206ENST00000475251 FAM19A2Q8N3H0 131 aa7.1□□□□□ -1.27
SKA3-206ENST00000475251 DAND5Q8N907 189 aa7.1□□□□□ -1.27
SKA3-206ENST00000475251 CST9LQ9H4G1 147 aa7.1□□□□□ -1.27
SKA3-206ENST00000475251 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
SKA3-206ENST00000475251 MT-ND4LP03901 98 aa7.09□□□□□ -1.27
SKA3-206ENST00000475251 RAB14P61106 215 aa7.09□□□□□ -1.27
SKA3-206ENST00000475251 PMVKQ15126 192 aa7.09□□□□□ -1.27
SKA3-206ENST00000475251 Q8NBF4 154 aa7.09□□□□□ -1.27
SKA3-206ENST00000475251 ADCYAP1P18509 176 aa7.08□□□□□ -1.28
SKA3-206ENST00000475251 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
SKA3-206ENST00000475251 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
SKA3-206ENST00000475251 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
SKA3-206ENST00000475251 IGLV5-39A0A0G2JS06 123 aa7.06□□□□□ -1.28
SKA3-206ENST00000475251 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
SKA3-206ENST00000475251 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
SKA3-206ENST00000475251 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
SKA3-206ENST00000475251 CFC1BP0CG36 223 aa7.04□□□□□ -1.28
SKA3-206ENST00000475251 IGLC3P0DOY3 106 aa7.04□□□□□ -1.28
SKA3-206ENST00000475251 LINC01546A6NGU7 62 aa7.03□□□□□ -1.28
SKA3-206ENST00000475251 PRYO14603 147 aa7.03□□□□□ -1.28
SKA3-206ENST00000475251 SLC25A20O43772 301 aa7.03□□□□□ -1.28
SKA3-206ENST00000475251 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
SKA3-206ENST00000475251 Q8NDZ9 215 aa7.02□□□□□ -1.29
SKA3-206ENST00000475251 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
SKA3-206ENST00000475251 SMCO4Q9NRQ5 59 aa7.02□□□□□ -1.29
SKA3-206ENST00000475251 ZNF22P17026 224 aaPredicted RBP7.01□□□□□ -1.29
SKA3-206ENST00000475251 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
SKA3-206ENST00000475251 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
SKA3-206ENST00000475251 Q8N377 158 aa7.01□□□□□ -1.29
SKA3-206ENST00000475251 SMCR5Q8TEV8 140 aa7.01□□□□□ -1.29
SKA3-206ENST00000475251 ETDCA0A1B0GVM5 59 aa7□□□□□ -1.29
SKA3-206ENST00000475251 NDUFA6P56556 154 aa7□□□□□ -1.29
SKA3-206ENST00000475251 LINC00158P58513 81 aa7□□□□□ -1.29
SKA3-206ENST00000475251 S100A12P80511 92 aa7□□□□□ -1.29
SKA3-206ENST00000475251 FA2HQ7L5A8 372 aa7□□□□□ -1.29
SKA3-206ENST00000475251 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
SKA3-206ENST00000475251 SPRR1AP35321 89 aa6.99□□□□□ -1.29
SKA3-206ENST00000475251 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
SKA3-206ENST00000475251 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
SKA3-206ENST00000475251 ATP6V1G1O75348 118 aa6.98□□□□□ -1.29
SKA3-206ENST00000475251 MOBPQ13875 183 aa6.98□□□□□ -1.29
SKA3-206ENST00000475251 GAGE2AQ6NT46 116 aa6.98□□□□□ -1.29
SKA3-206ENST00000475251 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
SKA3-206ENST00000475251 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
SKA3-206ENST00000475251 MT1HP80294 61 aa6.96□□□□□ -1.3
SKA3-206ENST00000475251 TMEM170BQ5T4T1 132 aa6.96□□□□□ -1.3
SKA3-206ENST00000475251 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
SKA3-206ENST00000475251 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
SKA3-206ENST00000475251 KRTAP4-16G5E9R7 235 aaPredicted RBP6.94□□□□□ -1.3
SKA3-206ENST00000475251 NCR3O14931 201 aa6.94□□□□□ -1.3
SKA3-206ENST00000475251 LINC00310P59036 64 aa6.94□□□□□ -1.3
SKA3-206ENST00000475251 COX19Q49B96 90 aa6.94□□□□□ -1.3
SKA3-206ENST00000475251 S100PP25815 95 aa6.93□□□□□ -1.3
SKA3-206ENST00000475251 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
SKA3-206ENST00000475251 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
SKA3-206ENST00000475251 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
SKA3-206ENST00000475251 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
SKA3-206ENST00000475251 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
SKA3-206ENST00000475251 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
SKA3-206ENST00000475251 TRBV10-3A0A0K0K1G6 114 aa6.91□□□□□ -1.3
SKA3-206ENST00000475251 B5MCH6 92 aa6.91□□□□□ -1.3
SKA3-206ENST00000475251 HBDP02042 147 aa6.91□□□□□ -1.3
SKA3-206ENST00000475251 SMIM13P0DJ93 91 aa6.9□□□□□ -1.3
SKA3-206ENST00000475251 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
SKA3-206ENST00000475251 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
SKA3-206ENST00000475251 A0A096LNJ9 63 aa6.89□□□□□ -1.31
SKA3-206ENST00000475251 HERV-K104P63124 156 aa6.89□□□□□ -1.31
SKA3-206ENST00000475251 PCOTHQ58A44 107 aa6.89□□□□□ -1.31
SKA3-206ENST00000475251 MIR7-3HGQ8N6C7 128 aa6.89□□□□□ -1.31
SKA3-206ENST00000475251 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
SKA3-206ENST00000475251 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
SKA3-206ENST00000475251 LINC00614P0C842 121 aa6.88□□□□□ -1.31
SKA3-206ENST00000475251 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
SKA3-206ENST00000475251 Q6ZRX8 168 aa6.88□□□□□ -1.31
SKA3-206ENST00000475251 LIMD2Q9BT23 127 aa6.88□□□□□ -1.31
SKA3-206ENST00000475251 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
SKA3-206ENST00000475251 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
SKA3-206ENST00000475251 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
SKA3-206ENST00000475251 SEC11CQ9BY50 192 aa6.87□□□□□ -1.31
SKA3-206ENST00000475251 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
SKA3-206ENST00000475251 M0R2T5 61 aa6.86□□□□□ -1.31
SKA3-206ENST00000475251 DDTP30046 118 aa6.86□□□□□ -1.31
SKA3-206ENST00000475251 Q9BRP9 147 aa6.86□□□□□ -1.31
SKA3-206ENST00000475251 C5orf52A6NGY3 159 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms