RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SVBPQ8N300 66 aa14.31□□□□□ -0.12
TMEM54-205ENST00000475208 C3orf22Q8N5N4 141 aa14.31□□□□□ -0.12
TMEM54-205ENST00000475208 LINC00614P0C842 121 aa14.3□□□□□ -0.12
TMEM54-205ENST00000475208 RPL24P83731 157 aaKnown RBP14.3□□□□□ -0.12
TMEM54-205ENST00000475208 PLEKHB2Q96CS7 222 aa14.3□□□□□ -0.12
TMEM54-205ENST00000475208 NDUFA5Q16718 116 aa14.29□□□□□ -0.12
TMEM54-205ENST00000475208 ZNF22P17026 224 aaPredicted RBP14.28□□□□□ -0.12
TMEM54-205ENST00000475208 CBLN2Q8IUK8 224 aa14.28□□□□□ -0.12
TMEM54-205ENST00000475208 Q8NDZ9 215 aa14.28□□□□□ -0.12
TMEM54-205ENST00000475208 PPDPFQ9H3Y8 114 aa14.28□□□□□ -0.12
TMEM54-205ENST00000475208 ZNF625Q96I27 306 aaPredicted RBP14.27□□□□□ -0.13
TMEM54-205ENST00000475208 NDUFA6P56556 154 aa14.26□□□□□ -0.13
TMEM54-205ENST00000475208 COX17Q14061 63 aa14.26□□□□□ -0.13
TMEM54-205ENST00000475208 HIGD2AQ9BW72 106 aa14.26□□□□□ -0.13
TMEM54-205ENST00000475208 YPEL4Q96NS1 127 aa14.25□□□□□ -0.13
TMEM54-205ENST00000475208 KRTAP9-6A0A140TA67 174 aa14.24□□□□□ -0.13
TMEM54-205ENST00000475208 HBDP02042 147 aa14.24□□□□□ -0.13
TMEM54-205ENST00000475208 PMCHL1Q16048 86 aa14.23□□□□□ -0.13
TMEM54-205ENST00000475208 SPAG11AQ6PDA7 123 aa14.22□□□□□ -0.13
TMEM54-205ENST00000475208 SPRR4Q96PI1 79 aa14.2□□□□□ -0.14
TMEM54-205ENST00000475208 SFTA2Q6UW10 78 aa14.18□□□□□ -0.14
TMEM54-205ENST00000475208 FP248Q71RG6 208 aaPredicted RBP14.18□□□□□ -0.14
TMEM54-205ENST00000475208 C11orf86A6NJI1 115 aa14.17□□□□□ -0.14
TMEM54-205ENST00000475208 TMEM170BQ5T4T1 132 aa14.16□□□□□ -0.14
TMEM54-205ENST00000475208 C4orf48Q5BLP8 95 aa14.15□□□□□ -0.14
TMEM54-205ENST00000475208 BAGE3Q86Y29 109 aa14.15□□□□□ -0.14
TMEM54-205ENST00000475208 ZNF706Q9Y5V0 76 aaPredicted RBP14.15□□□□□ -0.14
TMEM54-205ENST00000475208 LINC00158P58513 81 aa14.14□□□□□ -0.15
TMEM54-205ENST00000475208 LINC00337Q8N6G1 96 aa14.12□□□□□ -0.15
TMEM54-205ENST00000475208 CHCHD1Q96BP2 118 aaKnown RBP14.12□□□□□ -0.15
TMEM54-205ENST00000475208 A0A0U1RRA0 63 aa14.11□□□□□ -0.15
TMEM54-205ENST00000475208 DAND5Q8N907 189 aa14.11□□□□□ -0.15
TMEM54-205ENST00000475208 Q8NBF4 154 aa14.11□□□□□ -0.15
TMEM54-205ENST00000475208 KRTAP13-3Q3SY46 172 aa14.1□□□□□ -0.15
TMEM54-205ENST00000475208 PRYO14603 147 aa14.08□□□□□ -0.16
TMEM54-205ENST00000475208 CHTOPQ9Y3Y2 248 aaKnown RBP14.08□□□□□ -0.16
TMEM54-205ENST00000475208 ASB16-AS1Q495Z4 193 aa14.06□□□□□ -0.16
TMEM54-205ENST00000475208 IFI27L1Q96BM0 104 aa14.06□□□□□ -0.16
TMEM54-205ENST00000475208 TRAV12-1A0A0B4J245 112 aa14.05□□□□□ -0.16
TMEM54-205ENST00000475208 NCR3O14931 201 aa14.04□□□□□ -0.16
TMEM54-205ENST00000475208 SPRR1AP35321 89 aa14.04□□□□□ -0.16
TMEM54-205ENST00000475208 BOD1L2Q8IYS8 172 aa14.04□□□□□ -0.16
TMEM54-205ENST00000475208 SMCR5Q8TEV8 140 aa14.04□□□□□ -0.16
TMEM54-205ENST00000475208 SMIM13P0DJ93 91 aa14.03□□□□□ -0.16
TMEM54-205ENST00000475208 TMEM223A0PJW6 202 aa14.02□□□□□ -0.17
TMEM54-205ENST00000475208 ATP6V1G1O75348 118 aa14.02□□□□□ -0.17
TMEM54-205ENST00000475208 SPINK1P00995 79 aa14.02□□□□□ -0.17
TMEM54-205ENST00000475208 KCNQ1DNQ9H478 68 aa14.02□□□□□ -0.17
TMEM54-205ENST00000475208 ETDCA0A1B0GVM5 59 aa14.01□□□□□ -0.17
TMEM54-205ENST00000475208 TRGC2P03986 189 aa14.01□□□□□ -0.17
TMEM54-205ENST00000475208 SLC7A5P1Q8MH63 180 aa14.01□□□□□ -0.17
TMEM54-205ENST00000475208 FAM19A2Q8N3H0 131 aa14.01□□□□□ -0.17
TMEM54-205ENST00000475208 KRTAP4-16G5E9R7 235 aaPredicted RBP14□□□□□ -0.17
TMEM54-205ENST00000475208 HSBP1O75506 76 aa14□□□□□ -0.17
TMEM54-205ENST00000475208 LINC01547P58512 204 aaPredicted RBP14□□□□□ -0.17
TMEM54-205ENST00000475208 MEIG1Q5JSS6 88 aa13.99□□□□□ -0.17
TMEM54-205ENST00000475208 KRTAP4-1Q9BYQ7 146 aa13.99□□□□□ -0.17
TMEM54-205ENST00000475208 LINC00483Q53H64 154 aa13.98□□□□□ -0.17
TMEM54-205ENST00000475208 MIR7-3HGQ8N6C7 128 aa13.98□□□□□ -0.17
TMEM54-205ENST00000475208 SEC61BP60468 96 aaKnown RBP13.97□□□□□ -0.17
TMEM54-205ENST00000475208 TRBV10-3A0A0K0K1G6 114 aa13.95□□□□□ -0.18
TMEM54-205ENST00000475208 LINC00310P59036 64 aa13.95□□□□□ -0.18
TMEM54-205ENST00000475208 GAGE2AQ6NT46 116 aa13.95□□□□□ -0.18
TMEM54-205ENST00000475208 MOBPQ13875 183 aa13.94□□□□□ -0.18
TMEM54-205ENST00000475208 NDUFA12Q9UI09 145 aa13.94□□□□□ -0.18
TMEM54-205ENST00000475208 SERF1AO75920 110 aa13.93□□□□□ -0.18
TMEM54-205ENST00000475208 HERV-K104P63124 156 aa13.93□□□□□ -0.18
TMEM54-205ENST00000475208 IGLV9-49A0A0B4J1Y8 123 aa13.92□□□□□ -0.18
TMEM54-205ENST00000475208 COLCA2A8K830 154 aa13.92□□□□□ -0.18
TMEM54-205ENST00000475208 B5MCH6 92 aa13.9□□□□□ -0.18
TMEM54-205ENST00000475208 ERC2-IT1O76042 136 aa13.9□□□□□ -0.18
TMEM54-205ENST00000475208 LEPROTL1O95214 131 aa13.9□□□□□ -0.18
TMEM54-205ENST00000475208 RPS29P62273 56 aaKnown RBP13.9□□□□□ -0.18
TMEM54-205ENST00000475208 S100A12P80511 92 aa13.9□□□□□ -0.18
TMEM54-205ENST00000475208 Q8N377 158 aa13.9□□□□□ -0.18
TMEM54-205ENST00000475208 LINC00587B1AMM8 73 aa13.88□□□□□ -0.19
TMEM54-205ENST00000475208 H0Y8G0 127 aa13.88□□□□□ -0.19
TMEM54-205ENST00000475208 SSBP3-AS1Q7Z2R9 100 aa13.88□□□□□ -0.19
TMEM54-205ENST00000475208 MAP1LC3CQ9BXW4 147 aa13.87□□□□□ -0.19
TMEM54-205ENST00000475208 LCE2DQ5TA82 110 aaPredicted RBP13.86□□□□□ -0.19
TMEM54-205ENST00000475208 MYMXA0A1B0GTQ4 84 aa13.85□□□□□ -0.19
TMEM54-205ENST00000475208 SLC25A20O43772 301 aa13.84□□□□□ -0.19
TMEM54-205ENST00000475208 DDTP30046 118 aa13.84□□□□□ -0.19
TMEM54-205ENST00000475208 Q9BRP9 147 aa13.84□□□□□ -0.19
TMEM54-205ENST00000475208 HSPB8Q9UJY1 196 aa13.84□□□□□ -0.19
TMEM54-205ENST00000475208 FABP4P15090 132 aa13.82□□□□□ -0.2
TMEM54-205ENST00000475208 XP32Q5T750 250 aa13.82□□□□□ -0.2
TMEM54-205ENST00000475208 PLNP26678 52 aa13.81□□□□□ -0.2
TMEM54-205ENST00000475208 Q6ZRX8 168 aa13.81□□□□□ -0.2
TMEM54-205ENST00000475208 FSIP2Q5CZC0 6907 aa13.8□□□□□ -0.2
TMEM54-205ENST00000475208 TRBV10-2A0A0K0K1G8 114 aa13.8□□□□□ -0.2
TMEM54-205ENST00000475208 TSPEAR-AS2P59090 65 aa13.8□□□□□ -0.2
TMEM54-205ENST00000475208 LOC107984156A0A0G2JMH3 177 aa13.79□□□□□ -0.2
TMEM54-205ENST00000475208 LEPROTO15243 131 aa13.79□□□□□ -0.2
TMEM54-205ENST00000475208 ARL17AQ8IVW1 177 aa13.79□□□□□ -0.2
TMEM54-205ENST00000475208 DPM2O94777 84 aa13.78□□□□□ -0.2
TMEM54-205ENST00000475208 C9orf153Q5TBE3 101 aa13.77□□□□□ -0.21
TMEM54-205ENST00000475208 PMCHL2Q9BQD1 86 aa13.77□□□□□ -0.21
TMEM54-205ENST00000475208 SPANXB1Q9NS25 103 aaPredicted RBP13.76□□□□□ -0.21
TMEM54-205ENST00000475208 J3QQQ9 107 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms