RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
RTN1-205ENST00000474911 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
RTN1-205ENST00000474911 PTTG1IPP53801 180 aa8.72□□□□□ -1.01
RTN1-205ENST00000474911 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
RTN1-205ENST00000474911 MUSTN1Q8IVN3 82 aa8.72□□□□□ -1.01
RTN1-205ENST00000474911 LINC00308Q8TCZ7 52 aa8.72□□□□□ -1.01
RTN1-205ENST00000474911 PPDPFQ9H3Y8 114 aa8.72□□□□□ -1.01
RTN1-205ENST00000474911 FUSP35637 526 aaKnown RBP eCLIP8.71□□□□□ -1.01
RTN1-205ENST00000474911 RPL24P83731 157 aaKnown RBP8.71□□□□□ -1.01
RTN1-205ENST00000474911 Q8N814 137 aa8.71□□□□□ -1.01
RTN1-205ENST00000474911 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.71□□□□□ -1.02
RTN1-205ENST00000474911 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
RTN1-205ENST00000474911 NPC2P61916 151 aa8.71□□□□□ -1.02
RTN1-205ENST00000474911 HSPG2P98160 4391 aa8.7□□□□□ -1.02
RTN1-205ENST00000474911 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
RTN1-205ENST00000474911 A6NJY4 79 aa8.7□□□□□ -1.02
RTN1-205ENST00000474911 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
RTN1-205ENST00000474911 FXYD2P54710 66 aa8.7□□□□□ -1.02
RTN1-205ENST00000474911 BATFQ16520 125 aa8.69□□□□□ -1.02
RTN1-205ENST00000474911 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
RTN1-205ENST00000474911 SNHG12Q9BXW3 62 aa8.69□□□□□ -1.02
RTN1-205ENST00000474911 SND1-IT1Q9HBX3 110 aa8.69□□□□□ -1.02
RTN1-205ENST00000474911 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
RTN1-205ENST00000474911 LOC107984156A0A0G2JMH3 177 aa8.68□□□□□ -1.02
RTN1-205ENST00000474911 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
RTN1-205ENST00000474911 ARL17AQ8IVW1 177 aa8.68□□□□□ -1.02
RTN1-205ENST00000474911 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
RTN1-205ENST00000474911 LOC107984640A0A0U1RRK4 108 aa8.67□□□□□ -1.02
RTN1-205ENST00000474911 A4D1N5 150 aa8.67□□□□□ -1.02
RTN1-205ENST00000474911 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
RTN1-205ENST00000474911 Q8N1X5 172 aa8.67□□□□□ -1.02
RTN1-205ENST00000474911 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
RTN1-205ENST00000474911 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
RTN1-205ENST00000474911 A6NDN8 102 aa8.66□□□□□ -1.02
RTN1-205ENST00000474911 RPL18AQ02543 176 aaKnown RBP8.66□□□□□ -1.02
RTN1-205ENST00000474911 Q6ZRP5 223 aa8.66□□□□□ -1.02
RTN1-205ENST00000474911 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
RTN1-205ENST00000474911 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
RTN1-205ENST00000474911 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
RTN1-205ENST00000474911 XGP55808 180 aa8.65□□□□□ -1.02
RTN1-205ENST00000474911 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
RTN1-205ENST00000474911 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
RTN1-205ENST00000474911 NHP2Q9NX24 153 aaKnown RBP8.64□□□□□ -1.03
RTN1-205ENST00000474911 A0A1B0GWB2 263 aa8.63□□□□□ -1.03
RTN1-205ENST00000474911 XAGE1AQ9HD64 81 aa8.63□□□□□ -1.03
RTN1-205ENST00000474911 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
RTN1-205ENST00000474911 NDUFC2O95298 119 aa8.63□□□□□ -1.03
RTN1-205ENST00000474911 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
RTN1-205ENST00000474911 CFC1BP0CG36 223 aa8.62□□□□□ -1.03
RTN1-205ENST00000474911 CFC1P0CG37 223 aa8.62□□□□□ -1.03
RTN1-205ENST00000474911 COL5A1-AS1Q5SY13 56 aa8.62□□□□□ -1.03
RTN1-205ENST00000474911 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
RTN1-205ENST00000474911 RAB37Q96AX2 223 aa8.61□□□□□ -1.03
RTN1-205ENST00000474911 K7ERJ3 54 aa8.6□□□□□ -1.03
RTN1-205ENST00000474911 LBHQ53QV2 105 aaPredicted RBP8.6□□□□□ -1.03
RTN1-205ENST00000474911 A0A096LNI7 61 aa8.59□□□□□ -1.03
RTN1-205ENST00000474911 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
RTN1-205ENST00000474911 PRO1854Q9UHT4 67 aa8.59□□□□□ -1.03
RTN1-205ENST00000474911 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
RTN1-205ENST00000474911 IGKV2-28A0A075B6P5 120 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 IGKV2D-28P01615 120 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 VPREB1P12018 145 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 Q6ZSA8 131 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 Q8NDZ9 215 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
RTN1-205ENST00000474911 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
RTN1-205ENST00000474911 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
RTN1-205ENST00000474911 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
RTN1-205ENST00000474911 FAM30AQ9NZY2 134 aa8.57□□□□□ -1.04
RTN1-205ENST00000474911 TRBV10-2A0A0K0K1G8 114 aa8.56□□□□□ -1.04
RTN1-205ENST00000474911 NCR3O14931 201 aa8.56□□□□□ -1.04
RTN1-205ENST00000474911 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
RTN1-205ENST00000474911 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
RTN1-205ENST00000474911 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
RTN1-205ENST00000474911 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
RTN1-205ENST00000474911 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 TAX1BP3O14907 124 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 SERTAD4-AS1Q5TG53 156 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 M0R378 163 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 Q5VSD8 79 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
RTN1-205ENST00000474911 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
RTN1-205ENST00000474911 TSPAN13O95857 204 aa8.53□□□□□ -1.04
RTN1-205ENST00000474911 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
RTN1-205ENST00000474911 H7C2G1 150 aa8.52□□□□□ -1.05
RTN1-205ENST00000474911 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
RTN1-205ENST00000474911 HAMPP81172 84 aa8.52□□□□□ -1.05
RTN1-205ENST00000474911 Q1RN00 199 aa8.52□□□□□ -1.05
RTN1-205ENST00000474911 FAM19A5Q7Z5A7 132 aaPredicted RBP8.52□□□□□ -1.05
RTN1-205ENST00000474911 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
RTN1-205ENST00000474911 TMEM126AQ9H061 195 aa8.52□□□□□ -1.05
RTN1-205ENST00000474911 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
RTN1-205ENST00000474911 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
RTN1-205ENST00000474911 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
RTN1-205ENST00000474911 DNAH8Q96JB1 4490 aa8.5□□□□□ -1.05
RTN1-205ENST00000474911 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
RTN1-205ENST00000474911 IGLV6-57P01721 117 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms