RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 MEIG1Q5JSS6 88 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 FAM30AQ9NZY2 134 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
COL8A1-206ENST00000474648 RPL18AQ02543 176 aaKnown RBP6.37□□□□□ -1.39
COL8A1-206ENST00000474648 CIRBPQ14011 172 aaKnown RBP6.37□□□□□ -1.39
COL8A1-206ENST00000474648 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
COL8A1-206ENST00000474648 C9orf129Q5T035 196 aaKnown RBP6.37□□□□□ -1.39
COL8A1-206ENST00000474648 LINC00518Q8N0U6 118 aa6.37□□□□□ -1.39
COL8A1-206ENST00000474648 C12orf57Q99622 126 aa6.37□□□□□ -1.39
COL8A1-206ENST00000474648 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
COL8A1-206ENST00000474648 SLC25A34Q6PIV7 304 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 Q6ZSA8 131 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 DAND5Q8N907 189 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 SND1-IT1Q9HBX3 110 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 XAGE1AQ9HD64 81 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
COL8A1-206ENST00000474648 RYR1P21817 5038 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 IGKV2-24A0A0C4DH68 120 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 SCGB1D4Q6XE38 83 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 KRTAP7-1Q8IUC3 87 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 SPACA4Q8TDM5 124 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
COL8A1-206ENST00000474648 LOC107984156A0A0G2JMH3 177 aa6.34□□□□□ -1.39
COL8A1-206ENST00000474648 EPM2AB3EWF7 344 aa6.34□□□□□ -1.39
COL8A1-206ENST00000474648 SOSTDC1Q6X4U4 206 aa6.34□□□□□ -1.39
COL8A1-206ENST00000474648 ARL17AQ8IVW1 177 aa6.34□□□□□ -1.39
COL8A1-206ENST00000474648 Q8NDZ9 215 aa6.34□□□□□ -1.39
COL8A1-206ENST00000474648 PRO1933Q9H354 126 aa6.34□□□□□ -1.39
COL8A1-206ENST00000474648 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 HIGD1BQ9P298 99 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 LINC00474Q9P2X8 69 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 UQCR10Q9UDW1 63 aa6.33□□□□□ -1.4
COL8A1-206ENST00000474648 A0A087WYN8 130 aa6.32□□□□□ -1.4
COL8A1-206ENST00000474648 TMEM238C9JI98 176 aa6.32□□□□□ -1.4
COL8A1-206ENST00000474648 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
COL8A1-206ENST00000474648 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
COL8A1-206ENST00000474648 PLAC8Q9NZF1 115 aa6.32□□□□□ -1.4
COL8A1-206ENST00000474648 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
COL8A1-206ENST00000474648 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 XGP55808 180 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 NPC2P61916 151 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 Q6ZVH6 145 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 DPH3Q96FX2 82 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
COL8A1-206ENST00000474648 VPREB1P12018 145 aa6.3□□□□□ -1.4
COL8A1-206ENST00000474648 IFITM1P13164 125 aa6.3□□□□□ -1.4
COL8A1-206ENST00000474648 PRR3P79522 188 aaKnown RBP6.3□□□□□ -1.4
COL8A1-206ENST00000474648 SCXQ7RTU7 201 aa6.3□□□□□ -1.4
COL8A1-206ENST00000474648 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
COL8A1-206ENST00000474648 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
COL8A1-206ENST00000474648 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
COL8A1-206ENST00000474648 HAMPP81172 84 aa6.29□□□□□ -1.4
COL8A1-206ENST00000474648 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.4
COL8A1-206ENST00000474648 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
COL8A1-206ENST00000474648 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
COL8A1-206ENST00000474648 HIST1H4GQ99525 98 aa6.28□□□□□ -1.4
COL8A1-206ENST00000474648 FAT1Q14517 4588 aa6.27□□□□□ -1.41
COL8A1-206ENST00000474648 NDUFC2O95298 119 aa6.27□□□□□ -1.41
COL8A1-206ENST00000474648 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
COL8A1-206ENST00000474648 TAL2Q16559 108 aa6.27□□□□□ -1.41
COL8A1-206ENST00000474648 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
COL8A1-206ENST00000474648 HSPG2P98160 4391 aa6.27□□□□□ -1.41
COL8A1-206ENST00000474648 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
COL8A1-206ENST00000474648 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
COL8A1-206ENST00000474648 HNRNPA3P51991 378 aaKnown RBP6.26□□□□□ -1.41
COL8A1-206ENST00000474648 A4D1N5 150 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 TSTD3H0UI37 97 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 M0R378 163 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 CEND1Q8N111 149 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 LINC00167Q96N53 147 aa6.25□□□□□ -1.41
COL8A1-206ENST00000474648 TRBV10-2A0A0K0K1G8 114 aa6.24□□□□□ -1.41
COL8A1-206ENST00000474648 M0QXV9 152 aa6.24□□□□□ -1.41
COL8A1-206ENST00000474648 NCR3O14931 201 aa6.24□□□□□ -1.41
COL8A1-206ENST00000474648 CTAG1AP78358 180 aa6.24□□□□□ -1.41
COL8A1-206ENST00000474648 HSD52Q0P140 79 aa6.24□□□□□ -1.41
COL8A1-206ENST00000474648 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
COL8A1-206ENST00000474648 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
COL8A1-206ENST00000474648 GAGE10A6NGK3 116 aa6.23□□□□□ -1.41
COL8A1-206ENST00000474648 FXYD2P54710 66 aa6.23□□□□□ -1.41
COL8A1-206ENST00000474648 LBHQ53QV2 105 aaPredicted RBP6.23□□□□□ -1.41
COL8A1-206ENST00000474648 HERC2O95714 4834 aa6.22□□□□□ -1.41
COL8A1-206ENST00000474648 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
COL8A1-206ENST00000474648 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
COL8A1-206ENST00000474648 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
COL8A1-206ENST00000474648 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
COL8A1-206ENST00000474648 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
COL8A1-206ENST00000474648 IGLV6-57P01721 117 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms