RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 CHTOPQ9Y3Y2 248 aaKnown RBP12.39□□□□□ -0.43
TRA2A-204ENST00000474586 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
TRA2A-204ENST00000474586 M0R378 163 aa12.37□□□□□ -0.43
TRA2A-204ENST00000474586 SNAPINO95295 136 aa12.36□□□□□ -0.43
TRA2A-204ENST00000474586 SFTA2Q6UW10 78 aa12.36□□□□□ -0.43
TRA2A-204ENST00000474586 LINC00158P58513 81 aa12.35□□□□□ -0.43
TRA2A-204ENST00000474586 SVBPQ8N300 66 aa12.34□□□□□ -0.43
TRA2A-204ENST00000474586 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
TRA2A-204ENST00000474586 A0A0U1RRA0 63 aa12.33□□□□□ -0.44
TRA2A-204ENST00000474586 TMEM223A0PJW6 202 aa12.33□□□□□ -0.44
TRA2A-204ENST00000474586 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
TRA2A-204ENST00000474586 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
TRA2A-204ENST00000474586 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
TRA2A-204ENST00000474586 CHCHD1Q96BP2 118 aaKnown RBP12.31□□□□□ -0.44
TRA2A-204ENST00000474586 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
TRA2A-204ENST00000474586 YPEL4Q96NS1 127 aa12.31□□□□□ -0.44
TRA2A-204ENST00000474586 RETNLBQ9BQ08 111 aa12.31□□□□□ -0.44
TRA2A-204ENST00000474586 CBLN2Q8IUK8 224 aa12.3□□□□□ -0.44
TRA2A-204ENST00000474586 HIGD2AQ9BW72 106 aa12.28□□□□□ -0.44
TRA2A-204ENST00000474586 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
TRA2A-204ENST00000474586 MUC2Q02817 5179 aa12.26□□□□□ -0.45
TRA2A-204ENST00000474586 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
TRA2A-204ENST00000474586 MEIG1Q5JSS6 88 aa12.24□□□□□ -0.45
TRA2A-204ENST00000474586 BOD1L2Q8IYS8 172 aa12.24□□□□□ -0.45
TRA2A-204ENST00000474586 FAM19A2Q8N3H0 131 aa12.24□□□□□ -0.45
TRA2A-204ENST00000474586 HSBP1O75506 76 aa12.22□□□□□ -0.45
TRA2A-204ENST00000474586 MIR7-3HGQ8N6C7 128 aa12.22□□□□□ -0.45
TRA2A-204ENST00000474586 SPRR4Q96PI1 79 aa12.22□□□□□ -0.45
TRA2A-204ENST00000474586 NCR3O14931 201 aa12.21□□□□□ -0.45
TRA2A-204ENST00000474586 H0Y8G0 127 aa12.2□□□□□ -0.46
TRA2A-204ENST00000474586 HERV-K104P63124 156 aa12.2□□□□□ -0.46
TRA2A-204ENST00000474586 NDUFA12Q9UI09 145 aa12.2□□□□□ -0.46
TRA2A-204ENST00000474586 PRYO14603 147 aa12.19□□□□□ -0.46
TRA2A-204ENST00000474586 IGLV7-46A0A075B6I9 117 aa12.18□□□□□ -0.46
TRA2A-204ENST00000474586 CTAG1AP78358 180 aa12.17□□□□□ -0.46
TRA2A-204ENST00000474586 MYMXA0A1B0GTQ4 84 aa12.16□□□□□ -0.46
TRA2A-204ENST00000474586 LINC00587B1AMM8 73 aa12.16□□□□□ -0.46
TRA2A-204ENST00000474586 SPRR1AP35321 89 aa12.16□□□□□ -0.46
TRA2A-204ENST00000474586 LINC00337Q8N6G1 96 aa12.16□□□□□ -0.46
TRA2A-204ENST00000474586 KCNQ1DNQ9H478 68 aa12.16□□□□□ -0.46
TRA2A-204ENST00000474586 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-204ENST00000474586 A0A0U1RQV1 116 aa12.15□□□□□ -0.46
TRA2A-204ENST00000474586 TRGC2P03986 189 aa12.15□□□□□ -0.46
TRA2A-204ENST00000474586 SMCR5Q8TEV8 140 aa12.15□□□□□ -0.46
TRA2A-204ENST00000474586 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
TRA2A-204ENST00000474586 TRBV10-3A0A0K0K1G6 114 aa12.14□□□□□ -0.47
TRA2A-204ENST00000474586 TSPEAR-AS2P59090 65 aa12.14□□□□□ -0.47
TRA2A-204ENST00000474586 TPRXLQ17RH7 258 aa12.14□□□□□ -0.47
TRA2A-204ENST00000474586 MAP1LC3CQ9BXW4 147 aa12.14□□□□□ -0.47
TRA2A-204ENST00000474586 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
TRA2A-204ENST00000474586 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
TRA2A-204ENST00000474586 SERF1AO75920 110 aa12.13□□□□□ -0.47
TRA2A-204ENST00000474586 LEPROTL1O95214 131 aa12.13□□□□□ -0.47
TRA2A-204ENST00000474586 LINC00310P59036 64 aa12.13□□□□□ -0.47
TRA2A-204ENST00000474586 SPAG11AQ6PDA7 123 aa12.13□□□□□ -0.47
TRA2A-204ENST00000474586 LEPROTO15243 131 aa12.12□□□□□ -0.47
TRA2A-204ENST00000474586 DAND5Q8N907 189 aa12.12□□□□□ -0.47
TRA2A-204ENST00000474586 PPDPFQ9H3Y8 114 aa12.12□□□□□ -0.47
TRA2A-204ENST00000474586 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
TRA2A-204ENST00000474586 Q8NBF4 154 aa12.09□□□□□ -0.47
TRA2A-204ENST00000474586 MUC17Q685J3 4493 aa12.09□□□□□ -0.47
TRA2A-204ENST00000474586 FABP4P15090 132 aa12.08□□□□□ -0.48
TRA2A-204ENST00000474586 PLNP26678 52 aa12.08□□□□□ -0.48
TRA2A-204ENST00000474586 LOC107984156A0A0G2JMH3 177 aa12.07□□□□□ -0.48
TRA2A-204ENST00000474586 J3QQQ9 107 aa12.07□□□□□ -0.48
TRA2A-204ENST00000474586 ARL17AQ8IVW1 177 aa12.07□□□□□ -0.48
TRA2A-204ENST00000474586 PMCHL2Q9BQD1 86 aa12.07□□□□□ -0.48
TRA2A-204ENST00000474586 B5MCH6 92 aa12.06□□□□□ -0.48
TRA2A-204ENST00000474586 DPM2O94777 84 aa12.06□□□□□ -0.48
TRA2A-204ENST00000474586 S100A12P80511 92 aa12.06□□□□□ -0.48
TRA2A-204ENST00000474586 HSPB8Q9UJY1 196 aa12.06□□□□□ -0.48
TRA2A-204ENST00000474586 DDTP30046 118 aa12.05□□□□□ -0.48
TRA2A-204ENST00000474586 GAGE2AQ6NT46 116 aa12.05□□□□□ -0.48
TRA2A-204ENST00000474586 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
TRA2A-204ENST00000474586 HERVK_113P61574 105 aa12.04□□□□□ -0.48
TRA2A-204ENST00000474586 LINC00483Q53H64 154 aa12.04□□□□□ -0.48
TRA2A-204ENST00000474586 TRBV10-2A0A0K0K1G8 114 aa12.03□□□□□ -0.48
TRA2A-204ENST00000474586 LGALS3P17931 250 aaKnown RBP12.03□□□□□ -0.48
TRA2A-204ENST00000474586 IGKCP01834 107 aa12.02□□□□□ -0.49
TRA2A-204ENST00000474586 NMUP48645 174 aa12.01□□□□□ -0.49
TRA2A-204ENST00000474586 FP248Q71RG6 208 aaPredicted RBP12.01□□□□□ -0.49
TRA2A-204ENST00000474586 Q9BRP9 147 aa12.01□□□□□ -0.49
TRA2A-204ENST00000474586 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
TRA2A-204ENST00000474586 FAT4Q6V0I7 4981 aa12□□□□□ -0.49
TRA2A-204ENST00000474586 SPANXB1Q9NS25 103 aaPredicted RBP12□□□□□ -0.49
TRA2A-204ENST00000474586 IGLV9-49A0A0B4J1Y8 123 aa11.99□□□□□ -0.49
TRA2A-204ENST00000474586 COLCA2A8K830 154 aa11.99□□□□□ -0.49
TRA2A-204ENST00000474586 SPINK1P00995 79 aa11.98□□□□□ -0.49
TRA2A-204ENST00000474586 MOBPQ13875 183 aa11.98□□□□□ -0.49
TRA2A-204ENST00000474586 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
TRA2A-204ENST00000474586 LCE2AQ5TA79 106 aaPredicted RBP11.98□□□□□ -0.49
TRA2A-204ENST00000474586 Q6ZRX8 168 aa11.98□□□□□ -0.49
TRA2A-204ENST00000474586 NDUFC2O95298 119 aa11.97□□□□□ -0.49
TRA2A-204ENST00000474586 IGLV6-57P01721 117 aa11.97□□□□□ -0.49
TRA2A-204ENST00000474586 NPC2P61916 151 aa11.97□□□□□ -0.49
TRA2A-204ENST00000474586 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.49
TRA2A-204ENST00000474586 ADAMTSL4-AS1Q5T5F5 129 aa11.96□□□□□ -0.49
TRA2A-204ENST00000474586 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
TRA2A-204ENST00000474586 A0A0J9YXY3 114 aa11.95□□□□□ -0.5
TRA2A-204ENST00000474586 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms