RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 TENM2Q9NT68 2774 aa14.15□□□□□ -0.14
SMIM11A-204ENST00000474455 UQCRQO14949 82 aa14.14□□□□□ -0.15
SMIM11A-204ENST00000474455 Q9HAA7 133 aa14.14□□□□□ -0.15
SMIM11A-204ENST00000474455 TOMM7Q9P0U1 55 aa14.14□□□□□ -0.15
SMIM11A-204ENST00000474455 LYPD5Q6UWN5 251 aa14.14□□□□□ -0.15
SMIM11A-204ENST00000474455 ESRGQ1W209 222 aa14.12□□□□□ -0.15
SMIM11A-204ENST00000474455 A0A087WYN8 130 aa14.11□□□□□ -0.15
SMIM11A-204ENST00000474455 LINC00526Q96FQ7 95 aa14.11□□□□□ -0.15
SMIM11A-204ENST00000474455 LINC01561Q8N1V8 128 aa14.1□□□□□ -0.15
SMIM11A-204ENST00000474455 IGLV4-60A0A075B6I1 120 aa14.1□□□□□ -0.15
SMIM11A-204ENST00000474455 HIST1H4AP62805 103 aaKnown RBP14.1□□□□□ -0.15
SMIM11A-204ENST00000474455 C9orf153Q5TBE3 101 aa14.1□□□□□ -0.15
SMIM11A-204ENST00000474455 SMIM20Q8N5G0 67 aa14.1□□□□□ -0.15
SMIM11A-204ENST00000474455 Q8N3U1 123 aa14.09□□□□□ -0.15
SMIM11A-204ENST00000474455 KLK5Q9Y337 293 aaPredicted RBP14.09□□□□□ -0.15
SMIM11A-204ENST00000474455 ATOX1O00244 68 aa14.08□□□□□ -0.16
SMIM11A-204ENST00000474455 Q6JHZ5 121 aa14.08□□□□□ -0.16
SMIM11A-204ENST00000474455 A0A1B0GX51 115 aa14.07□□□□□ -0.16
SMIM11A-204ENST00000474455 DNAH1Q9P2D7 4330 aa14.06□□□□□ -0.16
SMIM11A-204ENST00000474455 LINC00959A0A1B0GUT2 108 aa14.06□□□□□ -0.16
SMIM11A-204ENST00000474455 COX7CP15954 63 aa14.06□□□□□ -0.16
SMIM11A-204ENST00000474455 APLNQ9ULZ1 77 aa14.06□□□□□ -0.16
SMIM11A-204ENST00000474455 IGKV3OR2-268A0A0C4DH90 116 aa14.06□□□□□ -0.16
SMIM11A-204ENST00000474455 LELP1Q5T871 98 aa14.06□□□□□ -0.16
SMIM11A-204ENST00000474455 LECT2O14960 151 aa14.04□□□□□ -0.16
SMIM11A-204ENST00000474455 C6orf226Q5I0X4 101 aa14.04□□□□□ -0.16
SMIM11A-204ENST00000474455 WFDC10BQ8IUB3 73 aa14.04□□□□□ -0.16
SMIM11A-204ENST00000474455 Q8IZM0 81 aa14.04□□□□□ -0.16
SMIM11A-204ENST00000474455 LINC00167Q96N53 147 aa14.04□□□□□ -0.16
SMIM11A-204ENST00000474455 PFN2P35080 140 aa14.03□□□□□ -0.16
SMIM11A-204ENST00000474455 SS18Q15532 418 aa14.03□□□□□ -0.16
SMIM11A-204ENST00000474455 C14orf132Q9NPU4 83 aa14.03□□□□□ -0.16
SMIM11A-204ENST00000474455 ORMDL1Q9P0S3 153 aa14.03□□□□□ -0.16
SMIM11A-204ENST00000474455 LINC00588Q9Y4M8 146 aa14.03□□□□□ -0.16
SMIM11A-204ENST00000474455 A0A1B0GUV1 79 aa14.02□□□□□ -0.16
SMIM11A-204ENST00000474455 NUPR2A6NF83 97 aa14.02□□□□□ -0.16
SMIM11A-204ENST00000474455 OR13C6PQ8NH95 151 aa14.01□□□□□ -0.17
SMIM11A-204ENST00000474455 VPS13DQ5THJ4 4388 aa14.01□□□□□ -0.17
SMIM11A-204ENST00000474455 CRYGAP11844 174 aa14□□□□□ -0.17
SMIM11A-204ENST00000474455 MUC7Q8TAX7 377 aa14□□□□□ -0.17
SMIM11A-204ENST00000474455 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
SMIM11A-204ENST00000474455 C2orf48Q96LS8 159 aa13.99□□□□□ -0.17
SMIM11A-204ENST00000474455 WWC2-AS2Q96NR7 200 aa13.99□□□□□ -0.17
SMIM11A-204ENST00000474455 NDUFC2O95298 119 aa13.98□□□□□ -0.17
SMIM11A-204ENST00000474455 S100A7L2Q5SY68 101 aa13.98□□□□□ -0.17
SMIM11A-204ENST00000474455 JMJD7-PLA2G4BH0Y9G9 81 aa13.97□□□□□ -0.17
SMIM11A-204ENST00000474455 C9orf129Q5T035 196 aaKnown RBP13.97□□□□□ -0.17
SMIM11A-204ENST00000474455 LINC00846Q9NV44 126 aa13.97□□□□□ -0.17
SMIM11A-204ENST00000474455 COX17Q14061 63 aa13.97□□□□□ -0.17
SMIM11A-204ENST00000474455 KMT2AQ03164 3969 aa13.96□□□□□ -0.17
SMIM11A-204ENST00000474455 CCKP06307 115 aa13.96□□□□□ -0.17
SMIM11A-204ENST00000474455 CLPSL2Q6UWE3 100 aa13.95□□□□□ -0.18
SMIM11A-204ENST00000474455 NCR3O14931 201 aa13.94□□□□□ -0.18
SMIM11A-204ENST00000474455 ATP5EP2Q5VTU8 51 aa13.93□□□□□ -0.18
SMIM11A-204ENST00000474455 XCL1P47992 114 aa13.93□□□□□ -0.18
SMIM11A-204ENST00000474455 TMEM256-PLSCR3K7ERE1 68 aa13.92□□□□□ -0.18
SMIM11A-204ENST00000474455 ANGP03950 147 aaKnown RBP13.92□□□□□ -0.18
SMIM11A-204ENST00000474455 DNAH10Q8IVF4 4471 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 IGKV3D-7A0A0C4DH55 119 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 Q8N814 137 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 SLPIP03973 132 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 LINC00269Q8N2A0 174 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 SERP2Q8N6R1 65 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 KLK12Q9UKR0 248 aa13.91□□□□□ -0.18
SMIM11A-204ENST00000474455 CASC10Q5T4H9 136 aa13.89□□□□□ -0.19
SMIM11A-204ENST00000474455 CFAP161Q6P656 301 aa13.89□□□□□ -0.19
SMIM11A-204ENST00000474455 CD164L2Q6UWJ8 174 aa13.89□□□□□ -0.19
SMIM11A-204ENST00000474455 UBE2DNLQ8IWF7 75 aa13.88□□□□□ -0.19
SMIM11A-204ENST00000474455 RPS28P62857 69 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-204ENST00000474455 UPK3BQ9BT76 320 aa13.87□□□□□ -0.19
SMIM11A-204ENST00000474455 KIAA0087Q14695 138 aa13.87□□□□□ -0.19
SMIM11A-204ENST00000474455 LINC01556Q5JQF7 62 aa13.87□□□□□ -0.19
SMIM11A-204ENST00000474455 J3KT08 172 aa13.86□□□□□ -0.19
SMIM11A-204ENST00000474455 DNAH10OSP0CZ25 163 aa13.86□□□□□ -0.19
SMIM11A-204ENST00000474455 REG3AQ06141 175 aa13.85□□□□□ -0.19
SMIM11A-204ENST00000474455 ENHOQ6UWT2 76 aa13.85□□□□□ -0.19
SMIM11A-204ENST00000474455 HYDINQ4G0P3 5121 aa13.85□□□□□ -0.19
SMIM11A-204ENST00000474455 IGLV10-54A0A075B6I4 117 aa13.84□□□□□ -0.19
SMIM11A-204ENST00000474455 USP17L23D6RBM5 183 aa13.84□□□□□ -0.19
SMIM11A-204ENST00000474455 TRBV10-3A0A0K0K1G6 114 aa13.83□□□□□ -0.2
SMIM11A-204ENST00000474455 TMEM258P61165 79 aa13.82□□□□□ -0.2
SMIM11A-204ENST00000474455 PRR34Q9NV39 138 aa13.82□□□□□ -0.2
SMIM11A-204ENST00000474455 hADV29S1A0JD25 119 aa13.81□□□□□ -0.2
SMIM11A-204ENST00000474455 KRTAP1-5Q9BYS1 174 aa13.81□□□□□ -0.2
SMIM11A-204ENST00000474455 CHCHD10Q8WYQ3 142 aaPredicted RBP13.8□□□□□ -0.2
SMIM11A-204ENST00000474455 H3BQ85 93 aa13.8□□□□□ -0.2
SMIM11A-204ENST00000474455 ALMS1Q8TCU4 4167 aa13.8□□□□□ -0.2
SMIM11A-204ENST00000474455 C3orf84H3BNL1 204 aa13.79□□□□□ -0.2
SMIM11A-204ENST00000474455 A0A087WVE0 104 aa13.78□□□□□ -0.2
SMIM11A-204ENST00000474455 PRR3P79522 188 aaKnown RBP13.78□□□□□ -0.2
SMIM11A-204ENST00000474455 LINC00575Q6W349 94 aa13.78□□□□□ -0.2
SMIM11A-204ENST00000474455 DNAH2Q9P225 4427 aa13.77□□□□□ -0.21
SMIM11A-204ENST00000474455 UBL5Q9BZL1 73 aa13.77□□□□□ -0.21
SMIM11A-204ENST00000474455 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
SMIM11A-204ENST00000474455 DNAH6Q9C0G6 4158 aa13.76□□□□□ -0.21
SMIM11A-204ENST00000474455 LOC110117498A0A087WWA1 95 aa13.75□□□□□ -0.21
SMIM11A-204ENST00000474455 C6orf99Q4VX62 202 aa13.75□□□□□ -0.21
SMIM11A-204ENST00000474455 ZNF561-AS1K7EIQ3 104 aa13.74□□□□□ -0.21
SMIM11A-204ENST00000474455 BCE1O60756 84 aa13.74□□□□□ -0.21
SMIM11A-204ENST00000474455 LY6G6CO95867 125 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms