RNA–Protein interactions for RNA: ENST00000474391.1

COL4A1-203, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 2

Gene COL4A1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-203ENST00000474391 FABP4P15090 132 aa6.34□□□□□ -1.39
COL4A1-203ENST00000474391 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
COL4A1-203ENST00000474391 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
COL4A1-203ENST00000474391 ERG28Q9UKR5 140 aa6.34□□□□□ -1.39
COL4A1-203ENST00000474391 TMEM223A0PJW6 202 aa6.33□□□□□ -1.4
COL4A1-203ENST00000474391 BCE1O60756 84 aa6.33□□□□□ -1.4
COL4A1-203ENST00000474391 PFN2P35080 140 aa6.33□□□□□ -1.4
COL4A1-203ENST00000474391 PRR26Q8N8Z3 221 aa6.33□□□□□ -1.4
COL4A1-203ENST00000474391 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
COL4A1-203ENST00000474391 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
COL4A1-203ENST00000474391 LEPROTL1O95214 131 aa6.32□□□□□ -1.4
COL4A1-203ENST00000474391 SMIM6P0DI80 62 aa6.32□□□□□ -1.4
COL4A1-203ENST00000474391 FAM19A2Q8N3H0 131 aa6.32□□□□□ -1.4
COL4A1-203ENST00000474391 SND1-IT1Q9HBX3 110 aa6.32□□□□□ -1.4
COL4A1-203ENST00000474391 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
COL4A1-203ENST00000474391 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
COL4A1-203ENST00000474391 VPREB1P12018 145 aa6.31□□□□□ -1.4
COL4A1-203ENST00000474391 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
COL4A1-203ENST00000474391 NKAPP1Q8N9T2 125 aa6.31□□□□□ -1.4
COL4A1-203ENST00000474391 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
COL4A1-203ENST00000474391 RPL28P46779 137 aaKnown RBP6.3□□□□□ -1.4
COL4A1-203ENST00000474391 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
COL4A1-203ENST00000474391 C3orf79P0CE67 100 aa6.29□□□□□ -1.4
COL4A1-203ENST00000474391 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
COL4A1-203ENST00000474391 PET117Q6UWS5 81 aa6.29□□□□□ -1.4
COL4A1-203ENST00000474391 Q8NDZ9 215 aa6.29□□□□□ -1.4
COL4A1-203ENST00000474391 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
COL4A1-203ENST00000474391 RPL13AP40429 203 aaKnown RBP6.28□□□□□ -1.4
COL4A1-203ENST00000474391 PYY3Q5JQD4 70 aa6.28□□□□□ -1.4
COL4A1-203ENST00000474391 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
COL4A1-203ENST00000474391 IGKV2-28A0A075B6P5 120 aa6.27□□□□□ -1.41
COL4A1-203ENST00000474391 IGKV2D-28P01615 120 aa6.27□□□□□ -1.41
COL4A1-203ENST00000474391 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
COL4A1-203ENST00000474391 LRP2P98164 4655 aa6.26□□□□□ -1.41
COL4A1-203ENST00000474391 C20orf202A1L168 122 aa6.26□□□□□ -1.41
COL4A1-203ENST00000474391 LINC00158P58513 81 aa6.26□□□□□ -1.41
COL4A1-203ENST00000474391 HERV-K104P63124 156 aa6.26□□□□□ -1.41
COL4A1-203ENST00000474391 H0Y8G0 127 aa6.25□□□□□ -1.41
COL4A1-203ENST00000474391 SMIM13P0DJ93 91 aa6.25□□□□□ -1.41
COL4A1-203ENST00000474391 PLNP26678 52 aa6.25□□□□□ -1.41
COL4A1-203ENST00000474391 KRTDAPP60985 99 aa6.25□□□□□ -1.41
COL4A1-203ENST00000474391 LINC00518Q8N0U6 118 aa6.25□□□□□ -1.41
COL4A1-203ENST00000474391 TMEM126AQ9H061 195 aa6.25□□□□□ -1.41
COL4A1-203ENST00000474391 A0A087X002 238 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 A0A0U1RRA0 63 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 TMEM238C9JI98 176 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 M0R378 163 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 UBE2AP49459 152 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 S100A12P80511 92 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 C12orf57Q99622 126 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
COL4A1-203ENST00000474391 MYMXA0A1B0GTQ4 84 aa6.23□□□□□ -1.41
COL4A1-203ENST00000474391 LEPROTO15243 131 aa6.23□□□□□ -1.41
COL4A1-203ENST00000474391 DPM2O94777 84 aa6.23□□□□□ -1.41
COL4A1-203ENST00000474391 TSPEAR-AS2P59090 65 aa6.23□□□□□ -1.41
COL4A1-203ENST00000474391 MIR7-3HGQ8N6C7 128 aa6.23□□□□□ -1.41
COL4A1-203ENST00000474391 CRYGAP11844 174 aa6.22□□□□□ -1.41
COL4A1-203ENST00000474391 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
COL4A1-203ENST00000474391 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
COL4A1-203ENST00000474391 IGKV2D-26A0A0A0MRZ7 120 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 J3QQQ9 107 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 SCGB1D1O95968 90 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 IGKCP01834 107 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 PRLHP81277 87 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 BOD1L2Q8IYS8 172 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
COL4A1-203ENST00000474391 PCP4L1A6NKN8 68 aa6.2□□□□□ -1.42
COL4A1-203ENST00000474391 NMUP48645 174 aa6.2□□□□□ -1.42
COL4A1-203ENST00000474391 SPRR1AP35321 89 aa6.19□□□□□ -1.42
COL4A1-203ENST00000474391 HERVK_113P61574 105 aa6.19□□□□□ -1.42
COL4A1-203ENST00000474391 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
COL4A1-203ENST00000474391 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
COL4A1-203ENST00000474391 KCNQ1DNQ9H478 68 aa6.19□□□□□ -1.42
COL4A1-203ENST00000474391 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
COL4A1-203ENST00000474391 E9PLD3 99 aa6.18□□□□□ -1.42
COL4A1-203ENST00000474391 PRYO14603 147 aa6.18□□□□□ -1.42
COL4A1-203ENST00000474391 KRTAP4-16G5E9R7 235 aaPredicted RBP6.17□□□□□ -1.42
COL4A1-203ENST00000474391 NCR3O14931 201 aa6.17□□□□□ -1.42
COL4A1-203ENST00000474391 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
COL4A1-203ENST00000474391 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
COL4A1-203ENST00000474391 DAND5Q8N907 189 aa6.17□□□□□ -1.42
COL4A1-203ENST00000474391 VAMP8Q9BV40 100 aa6.17□□□□□ -1.42
COL4A1-203ENST00000474391 TRBV10-2A0A0K0K1G8 114 aa6.16□□□□□ -1.42
COL4A1-203ENST00000474391 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
COL4A1-203ENST00000474391 LPAP08519 4548 aa6.15□□□□□ -1.42
COL4A1-203ENST00000474391 TRBV10-3A0A0K0K1G6 114 aa6.15□□□□□ -1.42
COL4A1-203ENST00000474391 HSBP1L1C9JCN9 74 aa6.15□□□□□ -1.42
COL4A1-203ENST00000474391 TSTD3H0UI37 97 aa6.15□□□□□ -1.42
COL4A1-203ENST00000474391 A0A0J9YXY3 114 aa6.14□□□□□ -1.43
COL4A1-203ENST00000474391 NDUFC2O95298 119 aa6.14□□□□□ -1.43
COL4A1-203ENST00000474391 TSPAN13O95857 204 aa6.14□□□□□ -1.43
COL4A1-203ENST00000474391 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
COL4A1-203ENST00000474391 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
COL4A1-203ENST00000474391 DLEU1O43261 78 aa6.13□□□□□ -1.43
COL4A1-203ENST00000474391 CTAG1AP78358 180 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms