RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 CCDC141Q6ZP82 1450 aa0.67□□□□□ -2.3
PGK1-202ENST00000474281 UNC79Q9P2D8 2635 aa0.67□□□□□ -2.3
PGK1-202ENST00000474281 MYMXA0A1B0GTQ4 84 aa0.66□□□□□ -2.3
PGK1-202ENST00000474281 IGLC2P0DOY2 106 aa0.66□□□□□ -2.3
PGK1-202ENST00000474281 Q5VSD8 79 aa0.66□□□□□ -2.3
PGK1-202ENST00000474281 ERVK-7P63135 1459 aa0.66□□□□□ -2.3
PGK1-202ENST00000474281 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
PGK1-202ENST00000474281 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
PGK1-202ENST00000474281 AKAP6Q13023 2319 aa0.65□□□□□ -2.3
PGK1-202ENST00000474281 POLR1AO95602 1720 aaPredicted RBP0.65□□□□□ -2.31
PGK1-202ENST00000474281 COX6B1P14854 86 aa0.65□□□□□ -2.31
PGK1-202ENST00000474281 PLGLAQ15195 96 aa0.65□□□□□ -2.31
PGK1-202ENST00000474281 TIAM2Q8IVF5 1701 aa0.64□□□□□ -2.31
PGK1-202ENST00000474281 CHD6Q8TD26 2715 aa0.64□□□□□ -2.31
PGK1-202ENST00000474281 ACYP1P07311 99 aa0.64□□□□□ -2.31
PGK1-202ENST00000474281 USMG5Q96IX5 58 aa0.64□□□□□ -2.31
PGK1-202ENST00000474281 BCORQ6W2J9 1755 aa0.63□□□□□ -2.31
PGK1-202ENST00000474281 SCN11AQ9UI33 1791 aa0.63□□□□□ -2.31
PGK1-202ENST00000474281 KANTRA0A1W2PQU2 76 aa0.63□□□□□ -2.31
PGK1-202ENST00000474281 KRTAP5-10Q6L8G5 202 aa0.63□□□□□ -2.31
PGK1-202ENST00000474281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.63□□□□□ -2.31
PGK1-202ENST00000474281 LRRC7Q96NW7 1537 aa0.63□□□□□ -2.31
PGK1-202ENST00000474281 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
PGK1-202ENST00000474281 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
PGK1-202ENST00000474281 RGPD8O14715 1765 aaPredicted RBP0.62□□□□□ -2.31
PGK1-202ENST00000474281 RGPD5Q99666 1765 aa0.62□□□□□ -2.31
PGK1-202ENST00000474281 S100A13Q99584 98 aa0.62□□□□□ -2.31
PGK1-202ENST00000474281 ST20Q9HBF5 79 aa0.62□□□□□ -2.31
PGK1-202ENST00000474281 KDM5DQ9BY66 1539 aa0.62□□□□□ -2.31
PGK1-202ENST00000474281 ZNF831Q5JPB2 1677 aa0.62□□□□□ -2.31
PGK1-202ENST00000474281 A0A1B0GUT8 65 aa0.61□□□□□ -2.31
PGK1-202ENST00000474281 SPINK1P00995 79 aa0.61□□□□□ -2.31
PGK1-202ENST00000474281 NKTRP30414 1462 aaKnown RBP0.61□□□□□ -2.31
PGK1-202ENST00000474281 NCOR1O75376 2440 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 PIK3C2BO00750 1634 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 DEFB112Q30KQ8 113 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 CFAP74Q9C0B2 1584 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 CELSR1Q9NYQ6 3014 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 MAST4O15021 2626 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 REV3LO60673 3130 aa0.6□□□□□ -2.31
PGK1-202ENST00000474281 CFDP00746 253 aaPredicted RBP0.59□□□□□ -2.31
PGK1-202ENST00000474281 SPRR1BP22528 89 aa0.59□□□□□ -2.31
PGK1-202ENST00000474281 SPRR1AP35321 89 aa0.59□□□□□ -2.31
PGK1-202ENST00000474281 ADIRFQ15847 76 aa0.59□□□□□ -2.31
PGK1-202ENST00000474281 TENM4Q6N022 2769 aa0.59□□□□□ -2.32
PGK1-202ENST00000474281 LRRIQ1Q96JM4 1722 aa0.58□□□□□ -2.32
PGK1-202ENST00000474281 CEBPZOSA8MTT3 80 aa0.58□□□□□ -2.32
PGK1-202ENST00000474281 COX8AP10176 69 aa0.58□□□□□ -2.32
PGK1-202ENST00000474281 DEFB109BQ30KR1 87 aa0.58□□□□□ -2.32
PGK1-202ENST00000474281 CRIPTQ9P021 101 aa0.58□□□□□ -2.32
PGK1-202ENST00000474281 HUWE1Q7Z6Z7 4374 aaKnown RBP0.57□□□□□ -2.32
PGK1-202ENST00000474281 ATRQ13535 2644 aa0.57□□□□□ -2.32
PGK1-202ENST00000474281 PTPN23Q9H3S7 1636 aa0.57□□□□□ -2.32
PGK1-202ENST00000474281 PREX1Q8TCU6 1659 aa0.57□□□□□ -2.32
PGK1-202ENST00000474281 UBR5O95071 2799 aaPredicted RBP0.57□□□□□ -2.32
PGK1-202ENST00000474281 IGSF10Q6WRI0 2623 aa0.57□□□□□ -2.32
PGK1-202ENST00000474281 USP32Q8NFA0 1604 aa0.56□□□□□ -2.32
PGK1-202ENST00000474281 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
PGK1-202ENST00000474281 DOT1LQ8TEK3 1739 aa0.56□□□□□ -2.32
PGK1-202ENST00000474281 GPR98Q8WXG9 6306 aa0.56□□□□□ -2.32
PGK1-202ENST00000474281 ARFGEF2Q9Y6D5 1785 aa0.56□□□□□ -2.32
PGK1-202ENST00000474281 URB2Q14146 1524 aaKnown RBP0.56□□□□□ -2.32
PGK1-202ENST00000474281 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.56□□□□□ -2.322e-6■■■■□ 24.2
PGK1-202ENST00000474281 CEP170BQ9Y4F5 1589 aaPredicted RBP0.56□□□□□ -2.32
PGK1-202ENST00000474281 RRBP1Q9P2E9 1410 aaKnown RBP0.55□□□□□ -2.32
PGK1-202ENST00000474281 MAGI3Q5TCQ9 1506 aa0.55□□□□□ -2.32
PGK1-202ENST00000474281 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
PGK1-202ENST00000474281 FAT2Q9NYQ8 4349 aa0.55□□□□□ -2.32
PGK1-202ENST00000474281 CNOT1A5YKK6 2376 aaKnown RBP0.55□□□□□ -2.32
PGK1-202ENST00000474281 ABCC1P33527 1531 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 BSNQ9UPA5 3926 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 KMT2AQ03164 3969 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 SPTY2D1-AS1A0A0U1RR47 76 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 I3L3M4 83 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 COX7BP24311 80 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 U3KQA8 63 aa0.54□□□□□ -2.32
PGK1-202ENST00000474281 ABCA8O94911 1581 aa0.53□□□□□ -2.32
PGK1-202ENST00000474281 CFAP43Q8NDM7 1665 aa0.53□□□□□ -2.32
PGK1-202ENST00000474281 SPTA1P02549 2419 aa0.53□□□□□ -2.32
PGK1-202ENST00000474281 CPSF4LA6NMK7 179 aaKnown RBP0.53□□□□□ -2.32
PGK1-202ENST00000474281 MAP3K1Q13233 1512 aa0.53□□□□□ -2.33
PGK1-202ENST00000474281 WNK2Q9Y3S1 2297 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 TRAV21A0A0B4J279 112 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 BVES-AS1Q5T3Y7 98 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 DEFB105AQ8NG35 78 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 GAFA1Q96PS6 74 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 HRNRQ86YZ3 2850 aaPredicted RBP0.52□□□□□ -2.33
PGK1-202ENST00000474281 FAT4Q6V0I7 4981 aa0.52□□□□□ -2.33
PGK1-202ENST00000474281 H3BUT2 72 aa0.51□□□□□ -2.33
PGK1-202ENST00000474281 NCOA2Q15596 1464 aa0.5□□□□□ -2.33
PGK1-202ENST00000474281 DEFB121Q5J5C9 76 aa0.5□□□□□ -2.33
PGK1-202ENST00000474281 MRPL34Q9BQ48 92 aaKnown RBP0.5□□□□□ -2.33
PGK1-202ENST00000474281 CLIP1P30622 1438 aa0.49□□□□□ -2.33
PGK1-202ENST00000474281 TNRC6CQ9HCJ0 1690 aaKnown RBP0.49□□□□□ -2.33
PGK1-202ENST00000474281 NESP48681 1621 aa0.49□□□□□ -2.33
PGK1-202ENST00000474281 NDUFB1O75438 58 aa0.48□□□□□ -2.33
PGK1-202ENST00000474281 ATP5EP2Q5VTU8 51 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms