RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 TMEM223A0PJW6 202 aa7.56□□□□□ -1.2
PCYT1A-214ENST00000473978 ZNF815PA8K554 130 aa7.56□□□□□ -1.2
PCYT1A-214ENST00000473978 MRPS36P82909 103 aaKnown RBP7.56□□□□□ -1.2
PCYT1A-214ENST00000473978 LINC00469Q8N7U9 141 aa7.56□□□□□ -1.2
PCYT1A-214ENST00000473978 GVQW2A0A096LPI5 108 aaPredicted RBP7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 A6NDN8 102 aa7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 IGLV7-43P04211 117 aa7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 UBE2D1P51668 147 aa7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 TAL2Q16559 108 aa7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 RNASE13Q5GAN3 156 aaKnown RBP7.55□□□□□ -1.2
PCYT1A-214ENST00000473978 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
PCYT1A-214ENST00000473978 LEPROTO15243 131 aa7.54□□□□□ -1.2
PCYT1A-214ENST00000473978 FXYD2P54710 66 aa7.54□□□□□ -1.2
PCYT1A-214ENST00000473978 CEND1Q8N111 149 aa7.54□□□□□ -1.2
PCYT1A-214ENST00000473978 H3BRM9 83 aa7.53□□□□□ -1.2
PCYT1A-214ENST00000473978 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
PCYT1A-214ENST00000473978 PLEKHB2Q96CS7 222 aa7.53□□□□□ -1.2
PCYT1A-214ENST00000473978 CDIP1Q9H305 208 aa7.53□□□□□ -1.2
PCYT1A-214ENST00000473978 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 TINCRA0A1B0GVN0 87 aa7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 J3QQQ9 107 aa7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 LGALS3P17931 250 aaKnown RBP7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 HIST1H4GQ99525 98 aa7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 CSDC2Q9Y534 153 aaKnown RBP7.52□□□□□ -1.2
PCYT1A-214ENST00000473978 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
PCYT1A-214ENST00000473978 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
PCYT1A-214ENST00000473978 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
PCYT1A-214ENST00000473978 PKIGQ9Y2B9 76 aa7.52□□□□□ -1.21
PCYT1A-214ENST00000473978 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
PCYT1A-214ENST00000473978 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
PCYT1A-214ENST00000473978 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 C9orf118A6NHY6 69 aa7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 FOXI1Q12951 378 aa7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 GAGE2BQ13066 116 aa7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 VAMP3Q15836 100 aa7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 GEMIN7Q9H840 131 aaKnown RBP7.5□□□□□ -1.21
PCYT1A-214ENST00000473978 K7ERJ3 54 aa7.49□□□□□ -1.21
PCYT1A-214ENST00000473978 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
PCYT1A-214ENST00000473978 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
PCYT1A-214ENST00000473978 TRAV13-1A0A0B4J241 112 aa7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 SS18Q15532 418 aa7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 FAM19A3Q7Z5A8 133 aa7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 RAB37Q96AX2 223 aa7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 SPANXB1Q9NS25 103 aaPredicted RBP7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
PCYT1A-214ENST00000473978 SPINK8P0C7L1 97 aa7.47□□□□□ -1.21
PCYT1A-214ENST00000473978 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
PCYT1A-214ENST00000473978 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
PCYT1A-214ENST00000473978 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 A0A1B0GWB2 263 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 H3BUT2 72 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 CCL25O15444 150 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 HERVK_113P63121 156 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 CDKN2A-AS1Q9UH64 79 aa7.46□□□□□ -1.21
PCYT1A-214ENST00000473978 XCL1P47992 114 aa7.45□□□□□ -1.22
PCYT1A-214ENST00000473978 SYCNQ0VAF6 134 aa7.45□□□□□ -1.22
PCYT1A-214ENST00000473978 A0A087WZ39 114 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 A6NJY4 79 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 CRYGAP11844 174 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 IGLV5-39A0A0G2JS06 123 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 LOC107984640A0A0U1RRK4 108 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 A0A1W2PPM0 123 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
PCYT1A-214ENST00000473978 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
PCYT1A-214ENST00000473978 ZNF561-AS1K7EIQ3 104 aa7.43□□□□□ -1.22
PCYT1A-214ENST00000473978 SMIM1B2RUZ4 78 aa7.42□□□□□ -1.22
PCYT1A-214ENST00000473978 K7EP34 96 aa7.42□□□□□ -1.22
PCYT1A-214ENST00000473978 FABP2P12104 132 aa7.42□□□□□ -1.22
PCYT1A-214ENST00000473978 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
PCYT1A-214ENST00000473978 LITAFQ99732 161 aa7.42□□□□□ -1.22
PCYT1A-214ENST00000473978 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
PCYT1A-214ENST00000473978 NDUFA1O15239 70 aa7.41□□□□□ -1.22
PCYT1A-214ENST00000473978 GTF2H5Q6ZYL4 71 aa7.41□□□□□ -1.22
PCYT1A-214ENST00000473978 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
PCYT1A-214ENST00000473978 C5orf38Q86SI9 138 aa7.4□□□□□ -1.22
PCYT1A-214ENST00000473978 SPCS1Q9Y6A9 102 aa7.4□□□□□ -1.22
PCYT1A-214ENST00000473978 IGLV7-46A0A075B6I9 117 aa7.39□□□□□ -1.23
PCYT1A-214ENST00000473978 COX7A2LO14548 114 aa7.39□□□□□ -1.23
PCYT1A-214ENST00000473978 TIMM17BO60830 172 aa7.39□□□□□ -1.23
PCYT1A-214ENST00000473978 MALP21145 153 aa7.39□□□□□ -1.23
PCYT1A-214ENST00000473978 SPANXDQ9BXN6 97 aa7.39□□□□□ -1.23
PCYT1A-214ENST00000473978 SPANXCQ9NY87 97 aa7.39□□□□□ -1.23
PCYT1A-214ENST00000473978 APOMO95445 188 aa7.38□□□□□ -1.23
PCYT1A-214ENST00000473978 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
PCYT1A-214ENST00000473978 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
PCYT1A-214ENST00000473978 A0A087X002 238 aa7.37□□□□□ -1.23
PCYT1A-214ENST00000473978 IGHV3OR16-9A0A0B4J2B5 98 aa7.37□□□□□ -1.23
PCYT1A-214ENST00000473978 A4D1N5 150 aa7.37□□□□□ -1.23
PCYT1A-214ENST00000473978 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms