RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
VARS2-206ENST00000473916 USP17L23D6RBM5 183 aa11.84□□□□□ -0.51
VARS2-206ENST00000473916 KRTAP21-3Q3LHN1 58 aa11.84□□□□□ -0.51
VARS2-206ENST00000473916 NCR3O14931 201 aa11.84□□□□□ -0.51
VARS2-206ENST00000473916 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
VARS2-206ENST00000473916 SMIM11BQ8TCY0 68 aa11.84□□□□□ -0.51
VARS2-206ENST00000473916 COX6CP09669 75 aa11.83□□□□□ -0.52
VARS2-206ENST00000473916 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
VARS2-206ENST00000473916 SLPIP03973 132 aa11.82□□□□□ -0.52
VARS2-206ENST00000473916 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
VARS2-206ENST00000473916 C9JAW5 83 aa11.82□□□□□ -0.52
VARS2-206ENST00000473916 ETDBQ3ZM63 59 aa11.82□□□□□ -0.52
VARS2-206ENST00000473916 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
VARS2-206ENST00000473916 NDUFC2O95298 119 aa11.8□□□□□ -0.52
VARS2-206ENST00000473916 RPL28P46779 137 aaKnown RBP11.8□□□□□ -0.52
VARS2-206ENST00000473916 SYCNQ0VAF6 134 aa11.8□□□□□ -0.52
VARS2-206ENST00000473916 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
VARS2-206ENST00000473916 RMI2Q96E14 147 aa11.8□□□□□ -0.52
VARS2-206ENST00000473916 FAM218AQ96MZ4 157 aa11.8□□□□□ -0.52
VARS2-206ENST00000473916 TGP01266 2768 aa11.79□□□□□ -0.52
VARS2-206ENST00000473916 LST1O00453 97 aa11.79□□□□□ -0.52
VARS2-206ENST00000473916 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
VARS2-206ENST00000473916 Q6ZRP5 223 aa11.78□□□□□ -0.52
VARS2-206ENST00000473916 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
VARS2-206ENST00000473916 SLC25A20O43772 301 aa11.77□□□□□ -0.53
VARS2-206ENST00000473916 MUC7Q8TAX7 377 aa11.77□□□□□ -0.53
VARS2-206ENST00000473916 VPS13DQ5THJ4 4388 aa11.77□□□□□ -0.53
VARS2-206ENST00000473916 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
VARS2-206ENST00000473916 RPL18AQ02543 176 aaKnown RBP11.76□□□□□ -0.53
VARS2-206ENST00000473916 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
VARS2-206ENST00000473916 A0A087WYN8 130 aa11.72□□□□□ -0.53
VARS2-206ENST00000473916 F8WDY8 70 aa11.72□□□□□ -0.53
VARS2-206ENST00000473916 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
VARS2-206ENST00000473916 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
VARS2-206ENST00000473916 TRBV10-2A0A0K0K1G8 114 aa11.71□□□□□ -0.53
VARS2-206ENST00000473916 TMEM126AQ9H061 195 aa11.71□□□□□ -0.53
VARS2-206ENST00000473916 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
VARS2-206ENST00000473916 VPREB1P12018 145 aa11.7□□□□□ -0.54
VARS2-206ENST00000473916 S100A7L2Q5SY68 101 aa11.7□□□□□ -0.54
VARS2-206ENST00000473916 PSCAO43653 123 aa11.7□□□□□ -0.54
VARS2-206ENST00000473916 TRBV10-3A0A0K0K1G6 114 aa11.68□□□□□ -0.54
VARS2-206ENST00000473916 M0R2N4 97 aa11.68□□□□□ -0.54
VARS2-206ENST00000473916 IGLV6-57P01721 117 aa11.68□□□□□ -0.54
VARS2-206ENST00000473916 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
VARS2-206ENST00000473916 TEN1Q86WV5 123 aa11.68□□□□□ -0.54
VARS2-206ENST00000473916 KMT2AQ03164 3969 aa11.68□□□□□ -0.54
VARS2-206ENST00000473916 K7ERU9 68 aa11.67□□□□□ -0.54
VARS2-206ENST00000473916 C6orf99Q4VX62 202 aa11.67□□□□□ -0.54
VARS2-206ENST00000473916 TRACP01848 142 aa11.65□□□□□ -0.54
VARS2-206ENST00000473916 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
VARS2-206ENST00000473916 TLX1NBP0CAT3 122 aa11.65□□□□□ -0.54
VARS2-206ENST00000473916 FAM168BA1KXE4 195 aa11.64□□□□□ -0.55
VARS2-206ENST00000473916 M0QXV9 152 aa11.64□□□□□ -0.55
VARS2-206ENST00000473916 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.64□□□□□ -0.55
VARS2-206ENST00000473916 H0YGX0 51 aa11.64□□□□□ -0.55
VARS2-206ENST00000473916 TTC32Q5I0X7 151 aa11.64□□□□□ -0.55
VARS2-206ENST00000473916 H3BT86 120 aa11.63□□□□□ -0.55
VARS2-206ENST00000473916 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
VARS2-206ENST00000473916 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
VARS2-206ENST00000473916 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
VARS2-206ENST00000473916 TEX49A0A1B0GTD5 131 aa11.62□□□□□ -0.55
VARS2-206ENST00000473916 C22orf24Q9Y442 160 aa11.61□□□□□ -0.55
VARS2-206ENST00000473916 LRCOL1A6NCL2 159 aa11.6□□□□□ -0.55
VARS2-206ENST00000473916 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
VARS2-206ENST00000473916 PPDPFLQ8WWR9 84 aa11.6□□□□□ -0.55
VARS2-206ENST00000473916 TRAV23DV6A0A075B6W5 121 aa11.6□□□□□ -0.55
VARS2-206ENST00000473916 M0R378 163 aa11.6□□□□□ -0.55
VARS2-206ENST00000473916 BAALC-AS2P0C853 105 aa11.59□□□□□ -0.55
VARS2-206ENST00000473916 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
VARS2-206ENST00000473916 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
VARS2-206ENST00000473916 DNAL4O96015 105 aa11.57□□□□□ -0.56
VARS2-206ENST00000473916 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
VARS2-206ENST00000473916 C7orf33Q8WU49 177 aa11.56□□□□□ -0.56
VARS2-206ENST00000473916 ZNF73O43830 326 aaPredicted RBP11.55□□□□□ -0.56
VARS2-206ENST00000473916 Q8N814 137 aa11.55□□□□□ -0.56
VARS2-206ENST00000473916 NKAPP1Q8N9T2 125 aa11.55□□□□□ -0.56
VARS2-206ENST00000473916 A0A096LNI7 61 aa11.55□□□□□ -0.56
VARS2-206ENST00000473916 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
VARS2-206ENST00000473916 VPS25Q9BRG1 176 aa11.55□□□□□ -0.56
VARS2-206ENST00000473916 DIRC1Q969H9 104 aa11.54□□□□□ -0.56
VARS2-206ENST00000473916 IGKV2-24A0A0C4DH68 120 aa11.53□□□□□ -0.56
VARS2-206ENST00000473916 LINC00575Q6W349 94 aa11.53□□□□□ -0.56
VARS2-206ENST00000473916 Q6ZR54 194 aa11.53□□□□□ -0.56
VARS2-206ENST00000473916 RPL37AP8A6NKH3 93 aa11.52□□□□□ -0.56
VARS2-206ENST00000473916 PLA2G2DQ9UNK4 145 aa11.52□□□□□ -0.56
VARS2-206ENST00000473916 J3QR89 54 aa11.52□□□□□ -0.57
VARS2-206ENST00000473916 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
VARS2-206ENST00000473916 LY6G6CO95867 125 aa11.51□□□□□ -0.57
VARS2-206ENST00000473916 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
VARS2-206ENST00000473916 WWC2-AS2Q96NR7 200 aa11.51□□□□□ -0.57
VARS2-206ENST00000473916 FUSP35637 526 aaKnown RBP eCLIP11.5□□□□□ -0.57
VARS2-206ENST00000473916 CHTF8P0CG12 524 aa11.5□□□□□ -0.57
VARS2-206ENST00000473916 IGLV5-37A0A075B6J1 123 aa11.49□□□□□ -0.57
VARS2-206ENST00000473916 A0A1B0GV72 72 aa11.48□□□□□ -0.57
VARS2-206ENST00000473916 C16orf90A8MZG2 172 aa11.48□□□□□ -0.57
VARS2-206ENST00000473916 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
VARS2-206ENST00000473916 A0A1B0GX51 115 aa11.48□□□□□ -0.57
VARS2-206ENST00000473916 hADV29S1A0JD25 119 aa11.48□□□□□ -0.57
VARS2-206ENST00000473916 COX7BP24311 80 aa11.48□□□□□ -0.57
VARS2-206ENST00000473916 ELOF1P60002 83 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms