RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 WFDC10AQ9H1F0 79 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 H3BUA1 57 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 FAM215AQ9Y5M1 114 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
TMEM39A-206ENST00000473684 IGKV3-20P01619 116 aa3.37□□□□□ -1.87
TMEM39A-206ENST00000473684 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
TMEM39A-206ENST00000473684 SORL1Q92673 2214 aa3.37□□□□□ -1.87
TMEM39A-206ENST00000473684 IGLV6-57P01721 117 aa3.37□□□□□ -1.87
TMEM39A-206ENST00000473684 MGAQ8IWI9 3026 aa3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 ST20-AS1Q8NBB2 130 aa3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 TTC28Q96AY4 2481 aa3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 CNBPP62633 177 aaKnown RBP3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 A8MTW9 85 aa3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 PRB2P02812 416 aaPredicted RBP3.36□□□□□ -1.87
TMEM39A-206ENST00000473684 C5orf42Q9H799 3197 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 CYSRT1A8MQ03 144 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 SPAG11BQ08648 103 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 FRYQ5TBA9 3013 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 IGHV3-11P01762 117 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 COA5Q86WW8 74 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 C5orf56Q8N8D9 126 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 LAMA2P24043 3122 aaKnown RBP3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 VCANP13611 3396 aa3.35□□□□□ -1.87
TMEM39A-206ENST00000473684 HTN1P15515 57 aa3.34□□□□□ -1.87
TMEM39A-206ENST00000473684 RETNLBQ9BQ08 111 aa3.34□□□□□ -1.87
TMEM39A-206ENST00000473684 CFAP54Q96N23 3096 aa3.34□□□□□ -1.87
TMEM39A-206ENST00000473684 SDK1Q7Z5N4 2213 aa3.34□□□□□ -1.87
TMEM39A-206ENST00000473684 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
TMEM39A-206ENST00000473684 GVINP1Q7Z2Y8 2422 aa3.34□□□□□ -1.88
TMEM39A-206ENST00000473684 ASH1LQ9NR48 2969 aaKnown RBP3.34□□□□□ -1.88
TMEM39A-206ENST00000473684 TRGV4A0A0C4DH28 118 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 CEP250Q9BV73 2442 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 FBXL19-AS1Q494R0 122 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 ZZEF1O43149 2961 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 FAM208BQ5VWN6 2430 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 MED13LQ71F56 2210 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 LINC00959A0A1B0GUT2 108 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 SPINK7P58062 85 aa3.33□□□□□ -1.88
TMEM39A-206ENST00000473684 SPTBN1Q01082 2364 aaKnown RBP3.32□□□□□ -1.88
TMEM39A-206ENST00000473684 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
TMEM39A-206ENST00000473684 Q8NAQ8 132 aa3.32□□□□□ -1.88
TMEM39A-206ENST00000473684 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
TMEM39A-206ENST00000473684 DOPEY2Q9Y3R5 2298 aa3.32□□□□□ -1.88
TMEM39A-206ENST00000473684 IGKV3OR2-268A0A0C4DH90 116 aa3.32□□□□□ -1.88
TMEM39A-206ENST00000473684 LAMA3Q16787 3333 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 ITPR1Q14643 2758 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 IGLV5-48A0A075B6I7 105 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 IGLV7-46A0A075B6I9 117 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 RTL8CO15255 209 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 DSCR10P59022 87 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 LYNX1G3V0Z9 82 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 LYNX1P0DP58 116 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 Q8NDZ9 215 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 COL6A6A6NMZ7 2263 aa3.31□□□□□ -1.88
TMEM39A-206ENST00000473684 INSP01308 110 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 FRYLO94915 3013 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 IGHV6-1A0A0B4J1U7 121 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 B4DSR2 109 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 PKDREJQ9NTG1 2253 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 CFAP47Q6ZTR5 3102 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 H0Y9P7 68 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 K7EQZ3 153 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 IGLV1-51P01701 117 aa3.3□□□□□ -1.88
TMEM39A-206ENST00000473684 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 TRGV1A0A0A0MS02 117 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 DEFB112Q30KQ8 113 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 SPAG11AQ6PDA7 123 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 CACNA1HO95180 2353 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 SPTBN2O15020 2390 aa3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 MAP1BP46821 2468 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-206ENST00000473684 MYO18BQ8IUG5 2567 aa3.28□□□□□ -1.88
TMEM39A-206ENST00000473684 ATP1A1-AS1Q5TC04 95 aa3.28□□□□□ -1.88
TMEM39A-206ENST00000473684 SPRR4Q96PI1 79 aa3.28□□□□□ -1.88
TMEM39A-206ENST00000473684 ZNF702PQ9H963 129 aa3.28□□□□□ -1.88
TMEM39A-206ENST00000473684 TRIOO75962 3097 aa3.28□□□□□ -1.88
TMEM39A-206ENST00000473684 Q8NBF4 154 aa3.28□□□□□ -1.88
TMEM39A-206ENST00000473684 CDH23Q9H251 3354 aa3.28□□□□□ -1.89
TMEM39A-206ENST00000473684 A0A0J9YWU9 116 aa3.27□□□□□ -1.89
TMEM39A-206ENST00000473684 IGSF10Q6WRI0 2623 aa3.27□□□□□ -1.89
TMEM39A-206ENST00000473684 TPRP12270 2363 aaKnown RBP3.27□□□□□ -1.89
TMEM39A-206ENST00000473684 EYSQ5T1H1 3165 aa3.27□□□□□ -1.89
TMEM39A-206ENST00000473684 ROS1P08922 2347 aa3.27□□□□□ -1.89
TMEM39A-206ENST00000473684 RP1L1Q8IWN7 2480 aaPredicted RBP3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 DEFB131AP59861 70 aa3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 GVQW2A0A096LPI5 108 aaPredicted RBP3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 C1orf134Q5TEV5 83 aa3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 NOTCH2NLQ7Z3S9 236 aa3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 FREM2Q5SZK8 3169 aa3.26□□□□□ -1.89
TMEM39A-206ENST00000473684 TENM4Q6N022 2769 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms