RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 IGLV3-1P01715 115 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 IL5P05113 134 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 SAA1P0DJI8 122 aaPredicted RBP1.19□□□□□ -2.22
XRN1-210ENST00000472697 ADCYAP1P18509 176 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 OR2T2Q6IF00 324 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 C4orf33Q8N1A6 199 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 ZNF431Q8TF32 576 aaPredicted RBP1.19□□□□□ -2.22
XRN1-210ENST00000472697 PKHD1L1Q86WI1 4243 aa1.19□□□□□ -2.22
XRN1-210ENST00000472697 TRAV12-2A0A075B6T6 113 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 TRBV6-5A0A0K0K1A5 114 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 MPC2O95563 127 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 HEPN1Q6WQI6 88 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 UBE2DNLQ8IWF7 75 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 Q8N6K4 173 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 LINC00052Q96N35 136 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 PSMG3Q9BT73 122 aaPredicted RBP1.18□□□□□ -2.22
XRN1-210ENST00000472697 LOC101927531A0A1B0GV80 90 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 HMGN4O00479 90 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 ELOBQ15370 118 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 DYNLRB2Q8TF09 96 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 TMEM203Q969S6 136 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 USMG5Q96IX5 58 aa1.18□□□□□ -2.22
XRN1-210ENST00000472697 SRRM2Q9UQ35 2752 aaKnown RBP1.17□□□□□ -2.22
XRN1-210ENST00000472697 LYRM1O43325 122 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 PPP3R1P63098 170 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 RPL38P63173 70 aaKnown RBP1.17□□□□□ -2.22
XRN1-210ENST00000472697 ATP11AUNQ6ZP68 121 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 TMEM191AQ9H0A3 160 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 GEMIN2O14893 280 aaKnown RBP1.17□□□□□ -2.22
XRN1-210ENST00000472697 NCR2O95944 276 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 IGKV4-1P06312 121 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 ZNF137PP52743 207 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 WHAMMP3Q1A5X7 153 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 DEFB136Q30KP8 78 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 MRPL54Q6P161 138 aaKnown RBP1.17□□□□□ -2.22
XRN1-210ENST00000472697 LINC00467Q9BRT7 94 aa1.17□□□□□ -2.22
XRN1-210ENST00000472697 TRAV2A0A0B4J234 112 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 FAM223BA6NKX1 122 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 M0R135 149 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 SMIM6P0DI80 62 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 ETV6P41212 452 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 NPC2P61916 151 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 TDRG1Q3Y452 100 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 PCOTHQ58A44 107 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 C9orf153Q5TBE3 101 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 FAM223AQ8IWN6 122 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 IFI27L1Q96BM0 104 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 HILPDAQ9Y5L2 63 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 PKD1P98161 4303 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
XRN1-210ENST00000472697 A0A087WSZ3 146 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 NBDYA0A0U1RRE5 68 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 S100A3P33764 101 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 SNCAP37840 140 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 C10orf99Q6UWK7 81 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 ATP6V0E2Q8NHE4 81 aa1.16□□□□□ -2.22
XRN1-210ENST00000472697 MYCBP2O75592 4640 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 IGKV3-7A0A075B6H7 116 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 J3QLW9 94 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 NDUFA3O95167 84 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 SPINK8P0C7L1 97 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 HSD52Q0P140 79 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 DEFB114Q30KQ6 69 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 RERGLQ9H628 205 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 KLK9Q9UKQ9 250 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 TNCP24821 2201 aa1.15□□□□□ -2.22
XRN1-210ENST00000472697 APOBP04114 4563 aaKnown RBP1.15□□□□□ -2.23
XRN1-210ENST00000472697 TMEM218A2RU14 115 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 MCRIP1C9JLW8 97 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 J3QRE1 110 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 MRPS14O60783 128 aaKnown RBP1.15□□□□□ -2.23
XRN1-210ENST00000472697 SNCGO76070 127 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 CYB5AP00167 134 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 CCL3L1P16619 93 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 LELP1Q5T871 98 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 SNHG12Q9BXW3 62 aa1.15□□□□□ -2.23
XRN1-210ENST00000472697 DEFB131BA0A096LNP1 70 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 TRBV6-4A0A1B0GX49 114 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 HYPMO75409 117 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 TPPP2P59282 170 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 C10orf55Q5SWW7 151 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 ODF3Q96PU9 254 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 CCL18P55774 89 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 EDDM3BP56851 147 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 KLK9Q2XQG4 91 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 SFTA2Q6UW10 78 aa1.14□□□□□ -2.23
XRN1-210ENST00000472697 SPART-AS1P0CW21 52 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 COX7CP15954 63 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 FAM74A1Q5RGS3 127 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.13□□□□□ -2.23
XRN1-210ENST00000472697 GTF2H5Q6ZYL4 71 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 Q8N8P6 123 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 FAM213BQ8TBF2 198 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 TCEAL7Q9BRU2 100 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 CCDC167Q9P0B6 97 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 ORMDL1Q9P0S3 153 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 TEX49A0A1B0GTD5 131 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 IGKV2-29A2NJV5 120 aaPredicted RBP1.13□□□□□ -2.23
XRN1-210ENST00000472697 RBAKDNA6NC62 111 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms