RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 VCX2Q9H322 139 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 MAP1LC3AQ9H492 121 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 GEMIN7Q9H840 131 aaKnown RBP2.07□□□□□ -2.08
XRN1-209ENST00000472625 NDUFA12Q9UI09 145 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 V9GYV3 84 aa2.07□□□□□ -2.08
XRN1-209ENST00000472625 IGLV4-3A0A075B6K6 122 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 IGKV2D-26A0A0A0MRZ7 120 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 A0A1B0GVG6 124 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 H3BRM9 83 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 ATP5LO75964 103 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 KIAA0087Q14695 138 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 PEA15Q15121 130 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 C9orf129Q5T035 196 aaKnown RBP2.06□□□□□ -2.08
XRN1-209ENST00000472625 LINC00242Q5T6M2 205 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 SPAG11AQ6PDA7 123 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 ALKAL2Q6UX46 152 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 TMEM136Q6ZRR5 245 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 FP248Q71RG6 208 aaPredicted RBP2.06□□□□□ -2.08
XRN1-209ENST00000472625 FAM19A3Q7Z5A8 133 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 FAM19A2Q8N3H0 131 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 LINC00304Q8N9R0 145 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 TIMM17AQ99595 171 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 GNB1LQ9BYB4 327 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 NXT2Q9NPJ8 142 aaKnown RBP2.06□□□□□ -2.08
XRN1-209ENST00000472625 TOMM7Q9P0U1 55 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 C22orf24Q9Y442 160 aa2.06□□□□□ -2.08
XRN1-209ENST00000472625 ZNF706Q9Y5V0 76 aaPredicted RBP2.06□□□□□ -2.08
XRN1-209ENST00000472625 TSPAN13O95857 204 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 NPYP01303 97 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 RPL23P62829 140 aaKnown RBP2.05□□□□□ -2.08
XRN1-209ENST00000472625 S100A12P80511 92 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 PDZD11Q5EBL8 140 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 MRPL54Q6P161 138 aaKnown RBP2.05□□□□□ -2.08
XRN1-209ENST00000472625 C2orf82Q6UX34 121 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 C2orf66Q6UXQ4 117 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 LINC00469Q8N7U9 141 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 AMELXQ99217 191 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 XAGE1AQ9HD64 81 aa2.05□□□□□ -2.08
XRN1-209ENST00000472625 IGLV7-46A0A075B6I9 117 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 A0A1B0GXF2 115 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 NDUFAF8A1L188 74 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 SRP19P09132 144 aaKnown RBP2.04□□□□□ -2.08
XRN1-209ENST00000472625 COX17Q14061 63 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 LINC00337Q8N6G1 96 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 Q8N8P6 123 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 FAM218AQ96MZ4 157 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 RPS10P5Q9NQ39 176 aa2.04□□□□□ -2.08
XRN1-209ENST00000472625 TINCRA0A1B0GVN0 87 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 IGIPA6NJ69 53 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 MT-ND4LP03901 98 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 ERASQ7Z444 233 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 KRTAP11-1Q8IUC1 163 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 COX7B2Q8TF08 81 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 CDKN2A-AS1Q9UH64 79 aa2.03□□□□□ -2.08
XRN1-209ENST00000472625 IGKV2-28A0A075B6P5 120 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 LOC389332A0A1B0GUA5 103 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 RPL37AP8A6NKH3 93 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 SPINK1P00995 79 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 IGKV2D-28P01615 120 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 RPS29P62273 56 aaKnown RBP2.02□□□□□ -2.09
XRN1-209ENST00000472625 COX19Q49B96 90 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 FA2HQ7L5A8 372 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 FAM19A1Q7Z5A9 133 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 KRTAP13-1Q8IUC0 172 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 FAM104AQ969W3 186 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 TOMM6Q96B49 74 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 LINC00167Q96N53 147 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 SCGB3A1Q96QR1 104 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 TMEM126AQ9H061 195 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 PPDPFQ9H3Y8 114 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 SMCO4Q9NRQ5 59 aa2.02□□□□□ -2.09
XRN1-209ENST00000472625 LINC00587B1AMM8 73 aa2.01□□□□□ -2.09
XRN1-209ENST00000472625 RAB14P61106 215 aa2.01□□□□□ -2.09
XRN1-209ENST00000472625 PMVKQ15126 192 aa2.01□□□□□ -2.09
XRN1-209ENST00000472625 CBLN2Q8IUK8 224 aa2.01□□□□□ -2.09
XRN1-209ENST00000472625 DAND5Q8N907 189 aa2.01□□□□□ -2.09
XRN1-209ENST00000472625 ERG28Q9UKR5 140 aa2.01□□□□□ -2.09
XRN1-209ENST00000472625 ATP6V1G1O75348 118 aa2□□□□□ -2.09
XRN1-209ENST00000472625 S100PP25815 95 aa2□□□□□ -2.09
XRN1-209ENST00000472625 RAB5BP61020 215 aa2□□□□□ -2.09
XRN1-209ENST00000472625 PRLHP81277 87 aa2□□□□□ -2.09
XRN1-209ENST00000472625 ASB16-AS1Q495Z4 193 aa2□□□□□ -2.09
XRN1-209ENST00000472625 KRTAP13-2Q52LG2 175 aa2□□□□□ -2.09
XRN1-209ENST00000472625 RETNLBQ9BQ08 111 aa2□□□□□ -2.09
XRN1-209ENST00000472625 HIGD2AQ9BW72 106 aa2□□□□□ -2.09
XRN1-209ENST00000472625 CBY1Q9Y3M2 126 aa2□□□□□ -2.09
XRN1-209ENST00000472625 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 ETDCA0A1B0GVM5 59 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 M0R378 163 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 SLC25A20O43772 301 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 SPINK8P0C7L1 97 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 IGLC3P0DOY3 106 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 VPREB1P12018 145 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 PFN2P35080 140 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 JOSD1Q15040 202 aaPredicted RBP1.99□□□□□ -2.09
XRN1-209ENST00000472625 Q8N377 158 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 PLEKHB2Q96CS7 222 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms