RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 DEFB132Q7Z7B7 95 aa1.83□□□□□ -2.12
TTC3-214ENST00000472398 TTTY10Q9BZA0 68 aa1.83□□□□□ -2.12
TTC3-214ENST00000472398 CACNA1CQ13936 2221 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 FXYD4P59646 89 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 TMEM167BQ9NRX6 74 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 LMO7Q8WWI1 1683 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 RTTNQ86VV8 2226 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 SORL1Q92673 2214 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 IGLV4-69A0A075B6H9 119 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 RPL38P63173 70 aaKnown RBP1.82□□□□□ -2.12
TTC3-214ENST00000472398 C5orf56Q8N8D9 126 aa1.82□□□□□ -2.12
TTC3-214ENST00000472398 IAPPP10997 89 aa1.81□□□□□ -2.12
TTC3-214ENST00000472398 CRIP1P50238 77 aa1.81□□□□□ -2.12
TTC3-214ENST00000472398 LINC00315P59091 139 aa1.81□□□□□ -2.12
TTC3-214ENST00000472398 C14orf177Q52M58 125 aa1.81□□□□□ -2.12
TTC3-214ENST00000472398 REV3LO60673 3130 aa1.81□□□□□ -2.12
TTC3-214ENST00000472398 PRB3Q04118 309 aaPredicted RBP1.8□□□□□ -2.12
TTC3-214ENST00000472398 KCNQ1DNQ9H478 68 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 ASXL3Q9C0F0 2248 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 COL27A1Q8IZC6 1860 aaPredicted RBP1.8□□□□□ -2.12
TTC3-214ENST00000472398 LOC110117498A0A087WWA1 95 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 A0A1W2PNN7 141 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 COX7BP24311 80 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 RPL37AP61513 92 aaKnown RBP1.8□□□□□ -2.12
TTC3-214ENST00000472398 KRTAP7-1Q8IUC3 87 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 Q8N9L7 120 aa1.8□□□□□ -2.12
TTC3-214ENST00000472398 A0A1B0GU69 56 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 ETDCA0A1B0GVM5 59 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 IGLV6-57P01721 117 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 KRTAP1-5Q9BYS1 174 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 LOC730098B7Z3J9 87 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 H0YGX0 51 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 M0R2N4 97 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 GAS8-AS1O95177 125 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 ARHGAP5-AS1Q96IT6 56 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 AHCTF1Q8WYP5 2266 aa1.79□□□□□ -2.12
TTC3-214ENST00000472398 A0A0G2JMZ2 1700 aa1.78□□□□□ -2.12
TTC3-214ENST00000472398 LRRC37A2A6NM11 1700 aa1.78□□□□□ -2.12
TTC3-214ENST00000472398 LRRC37AA6NMS7 1700 aa1.78□□□□□ -2.12
TTC3-214ENST00000472398 PDE4DIPQ5VU43 2346 aa1.78□□□□□ -2.12
TTC3-214ENST00000472398 TECTAO75443 2155 aa1.78□□□□□ -2.12
TTC3-214ENST00000472398 H3BSH0 61 aa1.78□□□□□ -2.13
TTC3-214ENST00000472398 DEFB114Q30KQ6 69 aa1.78□□□□□ -2.13
TTC3-214ENST00000472398 FN1P02751 2386 aaKnown RBP1.78□□□□□ -2.13
TTC3-214ENST00000472398 URB1O60287 2271 aaKnown RBP1.76□□□□□ -2.13
TTC3-214ENST00000472398 H3BRN7 92 aa1.76□□□□□ -2.13
TTC3-214ENST00000472398 KRTAP11-1Q8IUC1 163 aa1.76□□□□□ -2.13
TTC3-214ENST00000472398 C4orf3Q8WVX3 66 aa1.76□□□□□ -2.13
TTC3-214ENST00000472398 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
TTC3-214ENST00000472398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.76□□□□□ -2.133e-6■■■■■ 34.3
TTC3-214ENST00000472398 LY6EQ16553 131 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 SSBP3-AS1Q7Z2R9 100 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 LINC00308Q8TCZ7 52 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 PRO3102Q9H379 93 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 ACYP2P14621 99 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 LINC00158P58513 81 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 DEFB134Q4QY38 66 aa1.75□□□□□ -2.13
TTC3-214ENST00000472398 G3V318 75 aa1.74□□□□□ -2.13
TTC3-214ENST00000472398 LINC01590Q5TEZ4 76 aa1.74□□□□□ -2.13
TTC3-214ENST00000472398 Q6ZQY7 126 aa1.74□□□□□ -2.13
TTC3-214ENST00000472398 CCL19Q99731 98 aa1.74□□□□□ -2.13
TTC3-214ENST00000472398 KNTC1P50748 2209 aa1.74□□□□□ -2.13
TTC3-214ENST00000472398 COX17Q14061 63 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 SMIM11BQ8TCY0 68 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 SMIM2Q9BVW6 85 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 IGKV2-28A0A075B6P5 120 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 IGKV2D-28P01615 120 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 MT3P25713 68 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 MAPK1IP1LQ8NDC0 245 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 CDKN2A-AS1Q9UH64 79 aa1.73□□□□□ -2.13
TTC3-214ENST00000472398 C10orf55Q5SWW7 151 aa1.72□□□□□ -2.13
TTC3-214ENST00000472398 PTPRQQ9UMZ3 2332 aa1.71□□□□□ -2.14
TTC3-214ENST00000472398 CNOT1A5YKK6 2376 aaKnown RBP1.71□□□□□ -2.14
TTC3-214ENST00000472398 BAHCC1Q9P281 2608 aa1.71□□□□□ -2.14
TTC3-214ENST00000472398 ATRXP46100 2492 aa1.71□□□□□ -2.14
TTC3-214ENST00000472398 ZNF462Q96JM2 2506 aa1.71□□□□□ -2.14
TTC3-214ENST00000472398 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
TTC3-214ENST00000472398 GPR179Q6PRD1 2367 aa1.7□□□□□ -2.14
TTC3-214ENST00000472398 PLCE1Q9P212 2302 aa1.7□□□□□ -2.14
TTC3-214ENST00000472398 KRTAP2-2Q9BYT5 123 aa1.7□□□□□ -2.14
TTC3-214ENST00000472398 SRCAPQ6ZRS2 3230 aa1.7□□□□□ -2.14
TTC3-214ENST00000472398 A0A096LNT2 108 aa1.69□□□□□ -2.14
TTC3-214ENST00000472398 Q6ZRX8 168 aa1.69□□□□□ -2.14
TTC3-214ENST00000472398 COL4A2P08572 1712 aa1.69□□□□□ -2.14
TTC3-214ENST00000472398 CACNA1EQ15878 2313 aa1.69□□□□□ -2.14
TTC3-214ENST00000472398 NDUFA1O15239 70 aa1.69□□□□□ -2.14
TTC3-214ENST00000472398 EP400Q96L91 3159 aa1.69□□□□□ -2.14
TTC3-214ENST00000472398 TNRC6CQ9HCJ0 1690 aaKnown RBP1.69□□□□□ -2.14
TTC3-214ENST00000472398 COL6A6A6NMZ7 2263 aa1.68□□□□□ -2.14
TTC3-214ENST00000472398 DEFB131BA0A096LNP1 70 aa1.68□□□□□ -2.14
TTC3-214ENST00000472398 INE1O15225 51 aa1.68□□□□□ -2.14
TTC3-214ENST00000472398 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
TTC3-214ENST00000472398 RPS27P42677 84 aaKnown RBP1.68□□□□□ -2.14
TTC3-214ENST00000472398 ASCC3Q8N3C0 2202 aaKnown RBP1.68□□□□□ -2.14
TTC3-214ENST00000472398 TRIOBPQ9H2D6 2365 aa1.68□□□□□ -2.14
TTC3-214ENST00000472398 USP24Q9UPU5 2620 aa1.68□□□□□ -2.14
TTC3-214ENST00000472398 SSC5DA1L4H1 1573 aa1.67□□□□□ -2.14
TTC3-214ENST00000472398 IGKV2D-24A0A075B6R9 120 aa1.67□□□□□ -2.14
TTC3-214ENST00000472398 KNL1Q8NG31 2342 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms