RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 ZNF706Q9Y5V0 76 aaPredicted RBP10.93□□□□□ -0.66
CCDC78-208ENST00000471861 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
CCDC78-208ENST00000471861 CFC1BP0CG36 223 aa10.9□□□□□ -0.66
CCDC78-208ENST00000471861 COX17Q14061 63 aa10.89□□□□□ -0.67
CCDC78-208ENST00000471861 KIAA1644Q3SXP7 199 aa10.89□□□□□ -0.67
CCDC78-208ENST00000471861 ZNF625Q96I27 306 aaPredicted RBP10.89□□□□□ -0.67
CCDC78-208ENST00000471861 NDUFA12Q9UI09 145 aa10.89□□□□□ -0.67
CCDC78-208ENST00000471861 H3BRM9 83 aa10.88□□□□□ -0.67
CCDC78-208ENST00000471861 KRTAP10-6P60371 365 aaPredicted RBP10.88□□□□□ -0.67
CCDC78-208ENST00000471861 PMVKQ15126 192 aa10.88□□□□□ -0.67
CCDC78-208ENST00000471861 LINC00483Q53H64 154 aa10.88□□□□□ -0.67
CCDC78-208ENST00000471861 LINC01546A6NGU7 62 aa10.87□□□□□ -0.67
CCDC78-208ENST00000471861 RPS29P62273 56 aaKnown RBP10.87□□□□□ -0.67
CCDC78-208ENST00000471861 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
CCDC78-208ENST00000471861 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
CCDC78-208ENST00000471861 SMCR5Q8TEV8 140 aa10.86□□□□□ -0.67
CCDC78-208ENST00000471861 ZNF22P17026 224 aaPredicted RBP10.85□□□□□ -0.67
CCDC78-208ENST00000471861 MOBPQ13875 183 aa10.85□□□□□ -0.67
CCDC78-208ENST00000471861 KRTAP4-16G5E9R7 235 aaPredicted RBP10.84□□□□□ -0.67
CCDC78-208ENST00000471861 SPRR1AP35321 89 aa10.84□□□□□ -0.67
CCDC78-208ENST00000471861 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
CCDC78-208ENST00000471861 PRYO14603 147 aa10.83□□□□□ -0.68
CCDC78-208ENST00000471861 IGLV9-49A0A0B4J1Y8 123 aa10.81□□□□□ -0.68
CCDC78-208ENST00000471861 LINC01549A6NIU2 74 aa10.81□□□□□ -0.68
CCDC78-208ENST00000471861 SLC25A20O43772 301 aa10.81□□□□□ -0.68
CCDC78-208ENST00000471861 MT-ND4LP03901 98 aa10.81□□□□□ -0.68
CCDC78-208ENST00000471861 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
CCDC78-208ENST00000471861 PCOTHQ58A44 107 aa10.79□□□□□ -0.68
CCDC78-208ENST00000471861 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
CCDC78-208ENST00000471861 FLGP20930 4061 aaPredicted RBP10.78□□□□□ -0.68
CCDC78-208ENST00000471861 IGLV8-61A0A075B6I0 122 aa10.77□□□□□ -0.69
CCDC78-208ENST00000471861 ERC2-IT1O76042 136 aa10.77□□□□□ -0.69
CCDC78-208ENST00000471861 SSBP3-AS1Q7Z2R9 100 aa10.77□□□□□ -0.69
CCDC78-208ENST00000471861 A0A0U1RRA0 63 aa10.76□□□□□ -0.69
CCDC78-208ENST00000471861 NCR3O14931 201 aa10.76□□□□□ -0.69
CCDC78-208ENST00000471861 LINC00158P58513 81 aa10.76□□□□□ -0.69
CCDC78-208ENST00000471861 A0A096LNJ9 63 aa10.75□□□□□ -0.69
CCDC78-208ENST00000471861 ETDCA0A1B0GVM5 59 aa10.75□□□□□ -0.69
CCDC78-208ENST00000471861 C11orf86A6NJI1 115 aa10.74□□□□□ -0.69
CCDC78-208ENST00000471861 CLLU1Q5K131 121 aa10.74□□□□□ -0.69
CCDC78-208ENST00000471861 KRTAP9-7A8MTY7 169 aa10.73□□□□□ -0.69
CCDC78-208ENST00000471861 NDUFA6P56556 154 aa10.73□□□□□ -0.69
CCDC78-208ENST00000471861 SFTA2Q6UW10 78 aa10.73□□□□□ -0.69
CCDC78-208ENST00000471861 IFITM2Q01629 132 aa10.72□□□□□ -0.69
CCDC78-208ENST00000471861 BOD1L2Q8IYS8 172 aa10.72□□□□□ -0.69
CCDC78-208ENST00000471861 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
CCDC78-208ENST00000471861 B5MCH6 92 aa10.71□□□□□ -0.69
CCDC78-208ENST00000471861 FA2HQ7L5A8 372 aa10.71□□□□□ -0.69
CCDC78-208ENST00000471861 Q9BRP9 147 aa10.71□□□□□ -0.69
CCDC78-208ENST00000471861 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.7□□□□□ -0.7
CCDC78-208ENST00000471861 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
CCDC78-208ENST00000471861 SMIM13P0DJ93 91 aa10.68□□□□□ -0.7
CCDC78-208ENST00000471861 SMCO4Q9NRQ5 59 aa10.68□□□□□ -0.7
CCDC78-208ENST00000471861 C9orf92A6NGG3 77 aa10.66□□□□□ -0.7
CCDC78-208ENST00000471861 M0R2T5 61 aa10.66□□□□□ -0.7
CCDC78-208ENST00000471861 MIR7-3HGQ8N6C7 128 aa10.66□□□□□ -0.7
CCDC78-208ENST00000471861 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
CCDC78-208ENST00000471861 TRAV9-1A0A075B6T8 112 aa10.64□□□□□ -0.71
CCDC78-208ENST00000471861 C9orf153Q5TBE3 101 aa10.64□□□□□ -0.71
CCDC78-208ENST00000471861 UQCC3Q6UW78 93 aa10.63□□□□□ -0.71
CCDC78-208ENST00000471861 PMCHL1Q16048 86 aa10.62□□□□□ -0.71
CCDC78-208ENST00000471861 Q6ZRX8 168 aa10.62□□□□□ -0.71
CCDC78-208ENST00000471861 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
CCDC78-208ENST00000471861 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
CCDC78-208ENST00000471861 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
CCDC78-208ENST00000471861 TMEM218A2RU14 115 aa10.59□□□□□ -0.71
CCDC78-208ENST00000471861 ATP6V1G1O75348 118 aa10.59□□□□□ -0.71
CCDC78-208ENST00000471861 HBDP02042 147 aa10.59□□□□□ -0.71
CCDC78-208ENST00000471861 SSPOA2VEC9 5147 aa10.58□□□□□ -0.72
CCDC78-208ENST00000471861 DDTP30046 118 aa10.57□□□□□ -0.72
CCDC78-208ENST00000471861 FABP9Q0Z7S8 132 aa10.57□□□□□ -0.72
CCDC78-208ENST00000471861 COMMD7Q86VX2 200 aa10.57□□□□□ -0.72
CCDC78-208ENST00000471861 USH2AO75445 5202 aa10.57□□□□□ -0.72
CCDC78-208ENST00000471861 ST20-AS1Q8NBB2 130 aa10.56□□□□□ -0.72
CCDC78-208ENST00000471861 CHTOPQ9Y3Y2 248 aaKnown RBP10.56□□□□□ -0.72
CCDC78-208ENST00000471861 S100A12P80511 92 aa10.55□□□□□ -0.72
CCDC78-208ENST00000471861 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
CCDC78-208ENST00000471861 LINC00614P0C842 121 aa10.54□□□□□ -0.72
CCDC78-208ENST00000471861 C18orf32Q8TCD1 76 aa10.54□□□□□ -0.72
CCDC78-208ENST00000471861 IGLV6-57P01721 117 aa10.53□□□□□ -0.72
CCDC78-208ENST00000471861 HRCT1Q6UXD1 115 aa10.53□□□□□ -0.72
CCDC78-208ENST00000471861 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
CCDC78-208ENST00000471861 TRBV10-2A0A0K0K1G8 114 aa10.52□□□□□ -0.73
CCDC78-208ENST00000471861 HERV-K104P63124 156 aa10.52□□□□□ -0.73
CCDC78-208ENST00000471861 LIMD2Q9BT23 127 aa10.52□□□□□ -0.73
CCDC78-208ENST00000471861 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
CCDC78-208ENST00000471861 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
CCDC78-208ENST00000471861 S100PP25815 95 aa10.5□□□□□ -0.73
CCDC78-208ENST00000471861 COX19Q49B96 90 aa10.5□□□□□ -0.73
CCDC78-208ENST00000471861 C10orf91Q5T1B1 145 aa10.49□□□□□ -0.73
CCDC78-208ENST00000471861 LINC00587B1AMM8 73 aa10.47□□□□□ -0.73
CCDC78-208ENST00000471861 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
CCDC78-208ENST00000471861 SPANXB1Q9NS25 103 aaPredicted RBP10.47□□□□□ -0.73
CCDC78-208ENST00000471861 TRAV12-1A0A0B4J245 112 aa10.46□□□□□ -0.73
CCDC78-208ENST00000471861 RPL37P61927 97 aaKnown RBP10.46□□□□□ -0.73
CCDC78-208ENST00000471861 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.73
CCDC78-208ENST00000471861 TRAV23DV6A0A075B6W5 121 aa10.45□□□□□ -0.74
CCDC78-208ENST00000471861 JOSD1Q15040 202 aaPredicted RBP10.45□□□□□ -0.74
CCDC78-208ENST00000471861 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
CCDC78-208ENST00000471861 SPRR1BP22528 89 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms