RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 RPS28P62857 69 aaKnown RBP8.28□□□□□ -1.08
LTA-215ENST00000471842 Q6ZRU5 148 aa8.28□□□□□ -1.08
LTA-215ENST00000471842 ORMDL3Q8N138 153 aa8.28□□□□□ -1.08
LTA-215ENST00000471842 RAB37Q96AX2 223 aa8.28□□□□□ -1.08
LTA-215ENST00000471842 PRELID3AQ96N28 172 aa8.28□□□□□ -1.08
LTA-215ENST00000471842 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
LTA-215ENST00000471842 LOC389332A0A1B0GUA5 103 aa8.27□□□□□ -1.09
LTA-215ENST00000471842 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
LTA-215ENST00000471842 SPAG11BQ08648 103 aa8.27□□□□□ -1.09
LTA-215ENST00000471842 TAL2Q16559 108 aa8.27□□□□□ -1.09
LTA-215ENST00000471842 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
LTA-215ENST00000471842 TIMM21Q9BVV7 248 aa8.27□□□□□ -1.09
LTA-215ENST00000471842 LOC107984640A0A0U1RRK4 108 aa8.26□□□□□ -1.09
LTA-215ENST00000471842 A0A1B0GWB2 263 aa8.26□□□□□ -1.09
LTA-215ENST00000471842 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
LTA-215ENST00000471842 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
LTA-215ENST00000471842 A0A0J9YXV3 536 aa8.26□□□□□ -1.09
LTA-215ENST00000471842 IFI27P40305 119 aaPredicted RBP8.25□□□□□ -1.09
LTA-215ENST00000471842 MEIG1Q5JSS6 88 aa8.25□□□□□ -1.09
LTA-215ENST00000471842 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
LTA-215ENST00000471842 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
LTA-215ENST00000471842 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
LTA-215ENST00000471842 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
LTA-215ENST00000471842 SNCGO76070 127 aa8.24□□□□□ -1.09
LTA-215ENST00000471842 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
LTA-215ENST00000471842 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
LTA-215ENST00000471842 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
LTA-215ENST00000471842 TEN1Q86WV5 123 aa8.21□□□□□ -1.09
LTA-215ENST00000471842 FAM104AQ969W3 186 aa8.21□□□□□ -1.09
LTA-215ENST00000471842 NDUFA1O15239 70 aa8.2□□□□□ -1.1
LTA-215ENST00000471842 URB1-AS1Q96HZ7 61 aa8.2□□□□□ -1.1
LTA-215ENST00000471842 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 C9orf116Q5BN46 136 aaPredicted RBP8.19□□□□□ -1.1
LTA-215ENST00000471842 Q6ZRP5 223 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 TMEM141Q96I45 108 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 IGHV3OR16-9A0A0B4J2B5 98 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 CEND1Q8N111 149 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 Q8N8P6 123 aa8.19□□□□□ -1.1
LTA-215ENST00000471842 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
LTA-215ENST00000471842 C9JAW5 83 aa8.18□□□□□ -1.1
LTA-215ENST00000471842 C10orf25Q5T742 122 aa8.18□□□□□ -1.1
LTA-215ENST00000471842 ZC2HC1BQ5TFG8 222 aa8.18□□□□□ -1.1
LTA-215ENST00000471842 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
LTA-215ENST00000471842 UNQ6190/PRO20217Q6UXQ8 127 aa8.18□□□□□ -1.1
LTA-215ENST00000471842 LINC00242Q5T6M2 205 aa8.17□□□□□ -1.1
LTA-215ENST00000471842 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
LTA-215ENST00000471842 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
LTA-215ENST00000471842 MRPL35Q9NZE8 188 aaKnown RBP8.17□□□□□ -1.1
LTA-215ENST00000471842 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
LTA-215ENST00000471842 FXYD2P54710 66 aa8.16□□□□□ -1.1
LTA-215ENST00000471842 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
LTA-215ENST00000471842 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
LTA-215ENST00000471842 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
LTA-215ENST00000471842 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
LTA-215ENST00000471842 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
LTA-215ENST00000471842 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
LTA-215ENST00000471842 C6orf48Q9UBA6 75 aa8.15□□□□□ -1.1
LTA-215ENST00000471842 A0A087WZ39 114 aa8.14□□□□□ -1.11
LTA-215ENST00000471842 FAM168BA1KXE4 195 aa8.14□□□□□ -1.11
LTA-215ENST00000471842 UBE2D1P51668 147 aa8.14□□□□□ -1.11
LTA-215ENST00000471842 PMVKQ15126 192 aa8.14□□□□□ -1.11
LTA-215ENST00000471842 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
LTA-215ENST00000471842 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
LTA-215ENST00000471842 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
LTA-215ENST00000471842 PRSS2P07478 247 aa8.13□□□□□ -1.11
LTA-215ENST00000471842 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
LTA-215ENST00000471842 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
LTA-215ENST00000471842 PSORS1C2Q9UIG4 136 aa8.13□□□□□ -1.11
LTA-215ENST00000471842 SMCPP49901 116 aaPredicted RBP8.11□□□□□ -1.11
LTA-215ENST00000471842 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
LTA-215ENST00000471842 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
LTA-215ENST00000471842 K7EMI3 77 aa8.1□□□□□ -1.11
LTA-215ENST00000471842 UQCRQO14949 82 aa8.1□□□□□ -1.11
LTA-215ENST00000471842 UBE2BP63146 152 aa8.1□□□□□ -1.11
LTA-215ENST00000471842 AMELXQ99217 191 aa8.1□□□□□ -1.11
LTA-215ENST00000471842 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
LTA-215ENST00000471842 IGIPA6NJ69 53 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 K7ERJ3 54 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 TLX1NBP0CAT3 122 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 SCGB1C2P0DMR2 95 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.11
LTA-215ENST00000471842 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 PAPPA-AS1Q5QFB9 102 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
LTA-215ENST00000471842 NMUP48645 174 aa8.08□□□□□ -1.12
LTA-215ENST00000471842 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
LTA-215ENST00000471842 SCGB3A1Q96QR1 104 aa8.08□□□□□ -1.12
LTA-215ENST00000471842 TRBV7-7A0A0K0K1E9 115 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 NDUFC2-KCTD14E9PQ53 114 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 SEC61GP60059 68 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 HERVK_113P63121 156 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 TOMM6Q96B49 74 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 CDKN2A-AS1Q9UH64 79 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 PRO0628Q9UI54 55 aa8.07□□□□□ -1.12
LTA-215ENST00000471842 PCP2Q8IVA1 136 aa8.06□□□□□ -1.12
LTA-215ENST00000471842 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
LTA-215ENST00000471842 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
LTA-215ENST00000471842 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms