RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 A0A087X002 238 aa9.11□□□□□ -0.95
COL1A1-203ENST00000471344 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
COL1A1-203ENST00000471344 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
COL1A1-203ENST00000471344 S100A1P23297 94 aa9.1□□□□□ -0.95
COL1A1-203ENST00000471344 Q8NDZ9 215 aa9.1□□□□□ -0.95
COL1A1-203ENST00000471344 ZNF625Q96I27 306 aaPredicted RBP9.1□□□□□ -0.95
COL1A1-203ENST00000471344 PMCHL2Q9BQD1 86 aa9.1□□□□□ -0.95
COL1A1-203ENST00000471344 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
COL1A1-203ENST00000471344 IGKV2-28A0A075B6P5 120 aa9.09□□□□□ -0.95
COL1A1-203ENST00000471344 IGKV2D-28P01615 120 aa9.09□□□□□ -0.95
COL1A1-203ENST00000471344 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
COL1A1-203ENST00000471344 RPL28P46779 137 aaKnown RBP9.09□□□□□ -0.95
COL1A1-203ENST00000471344 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
COL1A1-203ENST00000471344 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
COL1A1-203ENST00000471344 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
COL1A1-203ENST00000471344 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
COL1A1-203ENST00000471344 SND1-IT1Q9HBX3 110 aa9.08□□□□□ -0.96
COL1A1-203ENST00000471344 VPREB1P12018 145 aa9.07□□□□□ -0.96
COL1A1-203ENST00000471344 COX17Q14061 63 aa9.07□□□□□ -0.96
COL1A1-203ENST00000471344 ERG28Q9UKR5 140 aa9.07□□□□□ -0.96
COL1A1-203ENST00000471344 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
COL1A1-203ENST00000471344 TSPAN13O95857 204 aa9.05□□□□□ -0.96
COL1A1-203ENST00000471344 PRR4Q16378 134 aa9.05□□□□□ -0.96
COL1A1-203ENST00000471344 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
COL1A1-203ENST00000471344 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
COL1A1-203ENST00000471344 UBE2AP49459 152 aa9.04□□□□□ -0.96
COL1A1-203ENST00000471344 TSPEAR-AS2P59090 65 aa9.04□□□□□ -0.96
COL1A1-203ENST00000471344 PRLHP81277 87 aa9.03□□□□□ -0.96
COL1A1-203ENST00000471344 KRTAP13-2Q52LG2 175 aa9.03□□□□□ -0.96
COL1A1-203ENST00000471344 A0A0U1RRA0 63 aa9.01□□□□□ -0.97
COL1A1-203ENST00000471344 CRYGAP11844 174 aa9.01□□□□□ -0.97
COL1A1-203ENST00000471344 RPL24P83731 157 aaKnown RBP9.01□□□□□ -0.97
COL1A1-203ENST00000471344 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
COL1A1-203ENST00000471344 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
COL1A1-203ENST00000471344 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
COL1A1-203ENST00000471344 M0R378 163 aa9□□□□□ -0.97
COL1A1-203ENST00000471344 DPM2O94777 84 aa9□□□□□ -0.97
COL1A1-203ENST00000471344 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
COL1A1-203ENST00000471344 MUC2Q02817 5179 aa8.99□□□□□ -0.97
COL1A1-203ENST00000471344 C3orf79P0CE67 100 aa8.99□□□□□ -0.97
COL1A1-203ENST00000471344 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
COL1A1-203ENST00000471344 IGKCP01834 107 aa8.98□□□□□ -0.97
COL1A1-203ENST00000471344 PLNP26678 52 aa8.98□□□□□ -0.97
COL1A1-203ENST00000471344 LINC00158P58513 81 aa8.98□□□□□ -0.97
COL1A1-203ENST00000471344 LINC01545Q5VT33 79 aa8.96□□□□□ -0.98
COL1A1-203ENST00000471344 LEPROTO15243 131 aa8.95□□□□□ -0.98
COL1A1-203ENST00000471344 SMIM13P0DJ93 91 aa8.95□□□□□ -0.98
COL1A1-203ENST00000471344 KRTDAPP60985 99 aa8.95□□□□□ -0.98
COL1A1-203ENST00000471344 HERV-K104P63124 156 aa8.94□□□□□ -0.98
COL1A1-203ENST00000471344 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
COL1A1-203ENST00000471344 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
COL1A1-203ENST00000471344 RETNLBQ9BQ08 111 aa8.94□□□□□ -0.98
COL1A1-203ENST00000471344 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
COL1A1-203ENST00000471344 J3QQQ9 107 aa8.93□□□□□ -0.98
COL1A1-203ENST00000471344 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
COL1A1-203ENST00000471344 LINC00587B1AMM8 73 aa8.92□□□□□ -0.98
COL1A1-203ENST00000471344 NCR3O14931 201 aa8.92□□□□□ -0.98
COL1A1-203ENST00000471344 C3orf22Q8N5N4 141 aa8.92□□□□□ -0.98
COL1A1-203ENST00000471344 MIR7-3HGQ8N6C7 128 aa8.92□□□□□ -0.98
COL1A1-203ENST00000471344 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
COL1A1-203ENST00000471344 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
COL1A1-203ENST00000471344 IGKV2D-26A0A0A0MRZ7 120 aa8.91□□□□□ -0.98
COL1A1-203ENST00000471344 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
COL1A1-203ENST00000471344 BOD1L2Q8IYS8 172 aa8.91□□□□□ -0.98
COL1A1-203ENST00000471344 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
COL1A1-203ENST00000471344 DAND5Q8N907 189 aa8.9□□□□□ -0.98
COL1A1-203ENST00000471344 HIST1H2BLQ99880 126 aa8.9□□□□□ -0.98
COL1A1-203ENST00000471344 TTTY13Q9BZ97 58 aa8.9□□□□□ -0.98
COL1A1-203ENST00000471344 MYMXA0A1B0GTQ4 84 aa8.89□□□□□ -0.99
COL1A1-203ENST00000471344 E9PLD3 99 aa8.89□□□□□ -0.99
COL1A1-203ENST00000471344 HERVK_113P61574 105 aa8.89□□□□□ -0.99
COL1A1-203ENST00000471344 ATOH7Q8N100 152 aa8.89□□□□□ -0.99
COL1A1-203ENST00000471344 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
COL1A1-203ENST00000471344 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
COL1A1-203ENST00000471344 ANKRD39Q53RE8 183 aa8.87□□□□□ -0.99
COL1A1-203ENST00000471344 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
COL1A1-203ENST00000471344 SPRR4Q96PI1 79 aa8.86□□□□□ -0.99
COL1A1-203ENST00000471344 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
COL1A1-203ENST00000471344 TRBV10-3A0A0K0K1G6 114 aa8.85□□□□□ -0.99
COL1A1-203ENST00000471344 PRYO14603 147 aa8.85□□□□□ -0.99
COL1A1-203ENST00000471344 CTAG1AP78358 180 aa8.85□□□□□ -0.99
COL1A1-203ENST00000471344 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
COL1A1-203ENST00000471344 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
COL1A1-203ENST00000471344 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
COL1A1-203ENST00000471344 SPRR1AP35321 89 aa8.84□□□□□ -0.99
COL1A1-203ENST00000471344 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
COL1A1-203ENST00000471344 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
COL1A1-203ENST00000471344 KCNQ1DNQ9H478 68 aa8.84□□□□□ -0.99
COL1A1-203ENST00000471344 S100A6P06703 90 aa8.83□□□□□ -1
COL1A1-203ENST00000471344 NMUP48645 174 aa8.83□□□□□ -1
COL1A1-203ENST00000471344 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
COL1A1-203ENST00000471344 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
COL1A1-203ENST00000471344 C5orf52A6NGY3 159 aa8.82□□□□□ -1
COL1A1-203ENST00000471344 S100A2P29034 98 aa8.82□□□□□ -1
COL1A1-203ENST00000471344 LITAFQ99732 161 aa8.82□□□□□ -1
COL1A1-203ENST00000471344 PPDPFQ9H3Y8 114 aa8.82□□□□□ -1
COL1A1-203ENST00000471344 C20orf202A1L168 122 aa8.81□□□□□ -1
COL1A1-203ENST00000471344 NPC2P61916 151 aa8.81□□□□□ -1
COL1A1-203ENST00000471344 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
COL1A1-203ENST00000471344 ZNF706Q9Y5V0 76 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms