RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 SCGB1C2P0DMR2 95 aa16.94■□□□□ 0.3
U2AF1-208ENST00000471250 Q8NDZ9 215 aa16.93■□□□□ 0.3
U2AF1-208ENST00000471250 Q6ZRN7 208 aaPredicted RBP16.92■□□□□ 0.3
U2AF1-208ENST00000471250 TLX1NBP0CAT3 122 aa16.91■□□□□ 0.3
U2AF1-208ENST00000471250 XAGE1AQ9HD64 81 aa16.91■□□□□ 0.3
U2AF1-208ENST00000471250 TENM2Q9NT68 2774 aa16.91■□□□□ 0.3
U2AF1-208ENST00000471250 M0R2N4 97 aa16.91■□□□□ 0.3
U2AF1-208ENST00000471250 PRR3P79522 188 aaKnown RBP16.91■□□□□ 0.3
U2AF1-208ENST00000471250 Q6ZRP5 223 aa16.9■□□□□ 0.3
U2AF1-208ENST00000471250 TRBV20-1A0A075B6N2 111 aa16.89■□□□□ 0.29
U2AF1-208ENST00000471250 C14orf177Q52M58 125 aa16.89■□□□□ 0.29
U2AF1-208ENST00000471250 COX6CP09669 75 aa16.88■□□□□ 0.29
U2AF1-208ENST00000471250 Q6ZR54 194 aa16.88■□□□□ 0.29
U2AF1-208ENST00000471250 TCL1BO95988 128 aa16.88■□□□□ 0.29
U2AF1-208ENST00000471250 OR13C6PQ8NH95 151 aa16.88■□□□□ 0.29
U2AF1-208ENST00000471250 C3orf84H3BNL1 204 aa16.87■□□□□ 0.29
U2AF1-208ENST00000471250 GAGE2EQ4V326 116 aa16.87■□□□□ 0.29
U2AF1-208ENST00000471250 GAGE2DQ9UEU5 116 aa16.87■□□□□ 0.29
U2AF1-208ENST00000471250 LRCOL1A6NCL2 159 aa16.86■□□□□ 0.29
U2AF1-208ENST00000471250 H3BMG7 143 aa16.86■□□□□ 0.29
U2AF1-208ENST00000471250 RPL28P46779 137 aaKnown RBP16.86■□□□□ 0.29
U2AF1-208ENST00000471250 NCR3O14931 201 aa16.85■□□□□ 0.29
U2AF1-208ENST00000471250 CNBPP62633 177 aaKnown RBP16.85■□□□□ 0.29
U2AF1-208ENST00000471250 TRBV10-2A0A0K0K1G8 114 aa16.83■□□□□ 0.28
U2AF1-208ENST00000471250 LY6G6CO95867 125 aa16.83■□□□□ 0.28
U2AF1-208ENST00000471250 SMIM11BQ8TCY0 68 aa16.83■□□□□ 0.28
U2AF1-208ENST00000471250 RPL18AQ02543 176 aaKnown RBP16.82■□□□□ 0.28
U2AF1-208ENST00000471250 TMEM126AQ9H061 195 aa16.82■□□□□ 0.28
U2AF1-208ENST00000471250 DNAH10Q8IVF4 4471 aa16.82■□□□□ 0.28
U2AF1-208ENST00000471250 LINC00476Q8WZB0 136 aa16.81■□□□□ 0.28
U2AF1-208ENST00000471250 VPREB1P12018 145 aa16.81■□□□□ 0.28
U2AF1-208ENST00000471250 C9orf129Q5T035 196 aaKnown RBP16.81■□□□□ 0.28
U2AF1-208ENST00000471250 LOC107984640A0A0U1RRK4 108 aa16.79■□□□□ 0.28
U2AF1-208ENST00000471250 ATXN8Q156A1 80 aa16.79■□□□□ 0.28
U2AF1-208ENST00000471250 TGP01266 2768 aa16.77■□□□□ 0.28
U2AF1-208ENST00000471250 S100A7L2Q5SY68 101 aa16.77■□□□□ 0.28
U2AF1-208ENST00000471250 CLEC2BQ92478 149 aa16.77■□□□□ 0.28
U2AF1-208ENST00000471250 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.75■□□□□ 0.27
U2AF1-208ENST00000471250 IGLV6-57P01721 117 aa16.75■□□□□ 0.27
U2AF1-208ENST00000471250 PRO0461Q9UI25 63 aa16.75■□□□□ 0.27
U2AF1-208ENST00000471250 PLA2G2DQ9UNK4 145 aa16.75■□□□□ 0.27
U2AF1-208ENST00000471250 F8W1H4 67 aa16.74■□□□□ 0.27
U2AF1-208ENST00000471250 LST1O00453 97 aa16.74■□□□□ 0.27
U2AF1-208ENST00000471250 GAGE2BQ13066 116 aa16.74■□□□□ 0.27
U2AF1-208ENST00000471250 M0R378 163 aa16.72■□□□□ 0.27
U2AF1-208ENST00000471250 C1orf134Q5TEV5 83 aa16.71■□□□□ 0.27
U2AF1-208ENST00000471250 DNAH6Q9C0G6 4158 aa16.7■□□□□ 0.26
U2AF1-208ENST00000471250 LINC01620Q4KN68 170 aa16.7■□□□□ 0.26
U2AF1-208ENST00000471250 Q8N814 137 aa16.7■□□□□ 0.26
U2AF1-208ENST00000471250 A0A087WTM6 91 aa16.69■□□□□ 0.26
U2AF1-208ENST00000471250 H0YGX0 51 aa16.69■□□□□ 0.26
U2AF1-208ENST00000471250 MTURNQ8N3F0 131 aa16.69■□□□□ 0.26
U2AF1-208ENST00000471250 ALMS1Q8TCU4 4167 aa16.69■□□□□ 0.26
U2AF1-208ENST00000471250 TRBV10-3A0A0K0K1G6 114 aa16.69■□□□□ 0.26
U2AF1-208ENST00000471250 SERTAD4-AS1Q5TG53 156 aa16.69■□□□□ 0.26
U2AF1-208ENST00000471250 C9orf163Q8N9P6 203 aa16.67■□□□□ 0.26
U2AF1-208ENST00000471250 IGLV5-37A0A075B6J1 123 aa16.66■□□□□ 0.26
U2AF1-208ENST00000471250 FAM218AQ96MZ4 157 aa16.66■□□□□ 0.26
U2AF1-208ENST00000471250 C16orf90A8MZG2 172 aa16.65■□□□□ 0.26
U2AF1-208ENST00000471250 C9JAW5 83 aa16.65■□□□□ 0.26
U2AF1-208ENST00000471250 SMCPP49901 116 aaPredicted RBP16.65■□□□□ 0.26
U2AF1-208ENST00000471250 NKAPP1Q8N9T2 125 aa16.65■□□□□ 0.26
U2AF1-208ENST00000471250 KMT2AQ03164 3969 aa16.64■□□□□ 0.25
U2AF1-208ENST00000471250 A0A096LNI7 61 aa16.63■□□□□ 0.25
U2AF1-208ENST00000471250 FAM168BA1KXE4 195 aa16.63■□□□□ 0.25
U2AF1-208ENST00000471250 TRAV23DV6A0A075B6W5 121 aa16.62■□□□□ 0.25
U2AF1-208ENST00000471250 TRACP01848 142 aa16.62■□□□□ 0.25
U2AF1-208ENST00000471250 C6orf99Q4VX62 202 aa16.62■□□□□ 0.25
U2AF1-208ENST00000471250 PKIGQ9Y2B9 76 aa16.62■□□□□ 0.25
U2AF1-208ENST00000471250 KRTAP7-1Q8IUC3 87 aa16.62■□□□□ 0.25
U2AF1-208ENST00000471250 SLC25A20O43772 301 aa16.61■□□□□ 0.25
U2AF1-208ENST00000471250 C7orf33Q8WU49 177 aa16.6■□□□□ 0.25
U2AF1-208ENST00000471250 CBY1Q9Y3M2 126 aa16.59■□□□□ 0.25
U2AF1-208ENST00000471250 A0A087WYN8 130 aa16.58■□□□□ 0.24
U2AF1-208ENST00000471250 M0QXV9 152 aa16.58■□□□□ 0.24
U2AF1-208ENST00000471250 IGKV2-24A0A0C4DH68 120 aa16.57■□□□□ 0.24
U2AF1-208ENST00000471250 LINC01600Q96MT4 127 aa16.57■□□□□ 0.24
U2AF1-208ENST00000471250 SDIM1Q6ZPB5 146 aa16.56■□□□□ 0.24
U2AF1-208ENST00000471250 FAM19A5Q7Z5A7 132 aaPredicted RBP16.56■□□□□ 0.24
U2AF1-208ENST00000471250 C22orf24Q9Y442 160 aa16.56■□□□□ 0.24
U2AF1-208ENST00000471250 DIRC1Q969H9 104 aa16.56■□□□□ 0.24
U2AF1-208ENST00000471250 ZNF73O43830 326 aaPredicted RBP16.55■□□□□ 0.24
U2AF1-208ENST00000471250 ANKRD29Q8N6D5 301 aa16.54■□□□□ 0.24
U2AF1-208ENST00000471250 A0A1B0GX51 115 aa16.53■□□□□ 0.24
U2AF1-208ENST00000471250 H3BT86 120 aa16.53■□□□□ 0.24
U2AF1-208ENST00000471250 DNAH2Q9P225 4427 aa16.53■□□□□ 0.24
U2AF1-208ENST00000471250 ETDBQ3ZM63 59 aa16.53■□□□□ 0.24
U2AF1-208ENST00000471250 KCNQ1DNQ9H478 68 aa16.53■□□□□ 0.24
U2AF1-208ENST00000471250 LINC00167Q96N53 147 aa16.52■□□□□ 0.23
U2AF1-208ENST00000471250 TRBV7-6A0A0J9YX20 115 aa16.51■□□□□ 0.23
U2AF1-208ENST00000471250 MRPL55Q7Z7F7 128 aaKnown RBP16.51■□□□□ 0.23
U2AF1-208ENST00000471250 A0A1W2PNN7 141 aa16.5■□□□□ 0.23
U2AF1-208ENST00000471250 IGLV1-50A0A075B6I6 118 aa16.5■□□□□ 0.23
U2AF1-208ENST00000471250 CHTF8P0CG12 524 aa16.5■□□□□ 0.23
U2AF1-208ENST00000471250 LINC00575Q6W349 94 aa16.5■□□□□ 0.23
U2AF1-208ENST00000471250 RTL8CO15255 209 aa16.49■□□□□ 0.23
U2AF1-208ENST00000471250 DNAL4O96015 105 aa16.49■□□□□ 0.23
U2AF1-208ENST00000471250 LINC00474Q9P2X8 69 aa16.49■□□□□ 0.23
U2AF1-208ENST00000471250 TNP2Q05952 138 aa16.48■□□□□ 0.23
U2AF1-208ENST00000471250 COX7BP24311 80 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms