RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 THEM6Q8WUY1 208 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 PP6455Q8WZ26 134 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 PRAP1Q96NZ9 151 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 CMSS1Q9BQ75 279 aaKnown RBP-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 IL20Q9NYY1 176 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 GLTPQ9NZD2 209 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 ARL2-SNX15V9GYD0 113 aa-0.41□□□□□ -2.48
UBXN4-207ENST00000471246 IGLV5-48A0A075B6I7 105 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TRBV25-1A0A075B6N4 114 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TRBV10-1A0A0K0K1A3 114 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TRBV10-3A0A0K0K1G6 114 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 M0R036 132 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 M0R2P5 195 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 PDE6DO43924 150 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 SLC25A5P05141 298 aaKnown RBP-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 IL7P13232 177 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 S100A12P80511 92 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 C10orf128Q5T292 105 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 BCL2L15Q5TBC7 163 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 Q6AWC8 147 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TOMM20LQ6UXN7 152 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TMEM14EPQ6UXP3 125 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 OR5D16Q8NGK9 328 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 OR4K15Q8NH41 348 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 HYLS1Q96M11 299 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 AQP10Q96PS8 301 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 NPCDR1Q9BY65 106 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 OR2H1Q9GZK4 316 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TAF9BQ9HBM6 251 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 NKIRAS1Q9NYS0 192 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 SLC22A13Q9Y226 551 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 ATP6V1DQ9Y5K8 247 aa-0.42□□□□□ -2.48
UBXN4-207ENST00000471246 TRBV7-3A0A075B6L6 115 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 A0A096LPI6 279 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 TRAV12-3A0A0B4J271 114 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 TRBV7-7A0A0K0K1E9 115 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 ETDCA0A1B0GVM5 59 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 CRYM-AS1A6NIL9 109 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 G3V2T6 193 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 TAX1BP3O14907 124 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 LYRM1O43325 122 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 NCR2O95944 276 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 TPM3P06753 285 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 NMBP08949 121 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 CST2P09228 141 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 SLC25A6P12236 298 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 IDO1P14902 403 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 FGF7P21781 194 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 MAGOHP61326 146 aaKnown RBP-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 VBP1P61758 197 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 HIST1H1AQ02539 215 aaPredicted RBP-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 MIR22HGQ0VDD5 57 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 MSMO1Q15800 293 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 HSD17B12Q53GQ0 312 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 Q56UQ5 140 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 GLYATL3Q5SZD4 288 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 CFAP126Q5VTH2 177 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 MIC13Q5XKP0 118 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 LINC00299Q6ZSB3 139 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 C9orf62Q8N4C0 152 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 GNPDA2Q8TDQ7 276 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 CLEC2BQ92478 149 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 CHCHD1Q96BP2 118 aaKnown RBP-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 LLPHQ9BRT6 129 aaKnown RBP-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 LXNQ9BS40 222 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 SCN3BQ9NY72 215 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 C6orf48Q9UBA6 75 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 PRELID3BQ9Y3B1 194 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 MPC1Q9Y5U8 109 aa-0.43□□□□□ -2.48
UBXN4-207ENST00000471246 TRAV30A0A087WSZ9 112 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 IGHV1-24A0A0C4DH33 117 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 UBE2L5PA0A1B0GUS4 154 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 PRORSD1PA6NEY8 169 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 H7C1C5 153 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 K7EIM0 57 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 M0QY20 66 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 HMGN4O00479 90 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 GNG7O60262 68 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 SNAPC5O75971 98 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 HMGN2P05204 90 aaKnown RBP-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 CSN2P05814 226 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 IAPPP10997 89 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 SCGB1A1P11684 91 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 GNG10P50151 68 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 GTF2A1P52655 376 aaPredicted RBP-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 GNG3P63215 75 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 VMA21Q3ZAQ7 101 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 Q6JHZ5 121 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 ZNF818PQ6ZRF7 136 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 Q8IZM0 81 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 OTUD6BQ8N6M0 293 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 MAFIPQ8WZ33 124 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 LINC00208Q96KT6 92 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 CGREF1Q99674 301 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 AIF1LQ9BQI0 150 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 SNRNP25Q9BV90 132 aaKnown RBP-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 KCNQ1DNQ9H478 68 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 POPDC3Q9HBV1 291 aa-0.44□□□□□ -2.48
UBXN4-207ENST00000471246 COMMD3Q9UBI1 195 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms