RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 CDKN2A-AS1Q9UH64 79 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 LAMTOR2Q9Y2Q5 125 aa3.41□□□□□ -1.86
GPNMB-208ENST00000470994 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 F8VRH5 84 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 BCE1O60756 84 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 MT-ND4LP03901 98 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 HERVK_113P63121 156 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 LINC00173Q6ZV60 143 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 SCGB3A1Q96QR1 104 aa3.4□□□□□ -1.87
GPNMB-208ENST00000470994 A0A087X002 238 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 A0A1B0GVG6 124 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 IGIPA6NJ69 53 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 G0S2P27469 103 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 CXCL5P42830 114 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 KIAA1644Q3SXP7 199 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 COX7B2Q8TF08 81 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 RETNLBQ9BQ08 111 aa3.39□□□□□ -1.87
GPNMB-208ENST00000470994 NXT2Q9NPJ8 142 aaKnown RBP3.39□□□□□ -1.87
GPNMB-208ENST00000470994 IGKV2D-26A0A0A0MRZ7 120 aa3.38□□□□□ -1.87
GPNMB-208ENST00000470994 SCO1O75880 301 aa3.38□□□□□ -1.87
GPNMB-208ENST00000470994 SPINK8P0C7L1 97 aa3.38□□□□□ -1.87
GPNMB-208ENST00000470994 TP73-AS1Q9UF72 201 aa3.38□□□□□ -1.87
GPNMB-208ENST00000470994 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 IGKV2-28A0A075B6P5 120 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 K7EMI3 77 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 ADCYAP1P18509 176 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 PFN2P35080 140 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 NDUFA6P56556 154 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 RAB14P61106 215 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 PNRC1Q12796 327 aaPredicted RBP3.37□□□□□ -1.87
GPNMB-208ENST00000470994 PDZD11Q5EBL8 140 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
GPNMB-208ENST00000470994 ERASQ7Z444 233 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 FAM19A1Q7Z5A9 133 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 TOMM6Q96B49 74 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 TIMM17AQ99595 171 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 RPS10P5Q9NQ39 176 aa3.37□□□□□ -1.87
GPNMB-208ENST00000470994 TINCRA0A1B0GVN0 87 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 SMIM1B2RUZ4 78 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 H3BRM9 83 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 ATP5LO75964 103 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 PRLHP81277 87 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 CST9LQ9H4G1 147 aa3.36□□□□□ -1.87
GPNMB-208ENST00000470994 PMVKQ15126 192 aa3.35□□□□□ -1.87
GPNMB-208ENST00000470994 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
GPNMB-208ENST00000470994 FA2HQ7L5A8 372 aa3.35□□□□□ -1.87
GPNMB-208ENST00000470994 ZNF625Q96I27 306 aaPredicted RBP3.35□□□□□ -1.87
GPNMB-208ENST00000470994 SMCO4Q9NRQ5 59 aa3.35□□□□□ -1.87
GPNMB-208ENST00000470994 LPAP08519 4548 aa3.34□□□□□ -1.87
GPNMB-208ENST00000470994 TMEM238C9JI98 176 aa3.34□□□□□ -1.87
GPNMB-208ENST00000470994 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
GPNMB-208ENST00000470994 FAM229BQ4G0N7 80 aa3.34□□□□□ -1.87
GPNMB-208ENST00000470994 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
GPNMB-208ENST00000470994 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
GPNMB-208ENST00000470994 HIGD2AQ9BW72 106 aa3.34□□□□□ -1.87
GPNMB-208ENST00000470994 IGLV5-45A0A087WSX0 123 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 A0A0U1RRA0 63 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 S100PP25815 95 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
GPNMB-208ENST00000470994 FABP9Q0Z7S8 132 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 C3orf22Q8N5N4 141 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 LINC00337Q8N6G1 96 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 ERG28Q9UKR5 140 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
GPNMB-208ENST00000470994 LINC01549A6NIU2 74 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 ATP6V1G1O75348 118 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 VPREB1P12018 145 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 LINC00158P58513 81 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 KRTAP13-1Q8IUC0 172 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 PLEKHB2Q96CS7 222 aa3.32□□□□□ -1.88
GPNMB-208ENST00000470994 MUC2Q02817 5179 aa3.31□□□□□ -1.88
GPNMB-208ENST00000470994 M0R378 163 aa3.31□□□□□ -1.88
GPNMB-208ENST00000470994 IGLC3P0DOY3 106 aa3.31□□□□□ -1.88
GPNMB-208ENST00000470994 BAGE3Q86Y29 109 aa3.31□□□□□ -1.88
GPNMB-208ENST00000470994 GNB1LQ9BYB4 327 aa3.31□□□□□ -1.88
GPNMB-208ENST00000470994 TRAV9-1A0A075B6T8 112 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 TMEM218A2RU14 115 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 A8MU10 97 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 ZNF22P17026 224 aaPredicted RBP3.3□□□□□ -1.88
GPNMB-208ENST00000470994 PMCHL1Q16048 86 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 SPAG11AQ6PDA7 123 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 DAND5Q8N907 189 aa3.3□□□□□ -1.88
GPNMB-208ENST00000470994 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 C11orf86A6NJI1 115 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 LINC00614P0C842 121 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 COX17Q14061 63 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 COX19Q49B96 90 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 Q8NDZ9 215 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 SMCR5Q8TEV8 140 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms