RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 TRGV4A0A0C4DH28 118 aa7.86□□□□□ -1.15
SRGAP3-204ENST00000470951 LINC00959A0A1B0GUT2 108 aa7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 MRPL55Q7Z7F7 128 aaKnown RBP7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 UBL5Q9BZL1 73 aa7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 ACANP16112 2415 aa7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 ZANQ9Y493 2812 aa7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 OTOGQ6ZRI0 2925 aa7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 LOC100131303A0A0U1RQF7 123 aa7.85□□□□□ -1.15
SRGAP3-204ENST00000470951 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
SRGAP3-204ENST00000470951 FLNAP21333 2647 aaKnown RBP7.84□□□□□ -1.15
SRGAP3-204ENST00000470951 COX17Q14061 63 aa7.84□□□□□ -1.15
SRGAP3-204ENST00000470951 MAST4O15021 2626 aa7.84□□□□□ -1.15
SRGAP3-204ENST00000470951 F8WEM9 126 aa7.83□□□□□ -1.16
SRGAP3-204ENST00000470951 NANOS2P60321 138 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-204ENST00000470951 KRTAP1-3Q8IUG1 177 aa7.83□□□□□ -1.16
SRGAP3-204ENST00000470951 TLN2Q9Y4G6 2542 aa7.82□□□□□ -1.16
SRGAP3-204ENST00000470951 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
SRGAP3-204ENST00000470951 GIG44P09565 113 aaPredicted RBP7.82□□□□□ -1.16
SRGAP3-204ENST00000470951 C2CD3Q4AC94 2353 aa7.82□□□□□ -1.16
SRGAP3-204ENST00000470951 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
SRGAP3-204ENST00000470951 ENHOQ6UWT2 76 aa7.81□□□□□ -1.16
SRGAP3-204ENST00000470951 MAPK1IP1LQ8NDC0 245 aa7.81□□□□□ -1.16
SRGAP3-204ENST00000470951 IGHV4-31P0DP07 118 aa7.81□□□□□ -1.16
SRGAP3-204ENST00000470951 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
SRGAP3-204ENST00000470951 TM2D3Q9BRN9 247 aa7.8□□□□□ -1.16
SRGAP3-204ENST00000470951 CR1P17927 2039 aa7.79□□□□□ -1.16
SRGAP3-204ENST00000470951 H3BQ85 93 aa7.79□□□□□ -1.16
SRGAP3-204ENST00000470951 FAM229BQ4G0N7 80 aa7.79□□□□□ -1.16
SRGAP3-204ENST00000470951 C6orf223Q8N319 242 aa7.79□□□□□ -1.16
SRGAP3-204ENST00000470951 MUC7Q8TAX7 377 aa7.79□□□□□ -1.16
SRGAP3-204ENST00000470951 IGHV4-28A0A0C4DH34 117 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 PDE6GP18545 87 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 Q6ZQT0 140 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 CSNK1G2-AS1Q8NCQ2 148 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 RMI2Q96E14 147 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 C11orf68Q9H3H3 251 aaKnown RBP7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 HIVEP1P15822 2718 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 WFDC9Q8NEX5 89 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 MPLKIPQ8TAP9 179 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
SRGAP3-204ENST00000470951 NOTCH3Q9UM47 2321 aa7.77□□□□□ -1.16
SRGAP3-204ENST00000470951 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
SRGAP3-204ENST00000470951 ESRGQ1W209 222 aa7.77□□□□□ -1.17
SRGAP3-204ENST00000470951 SONP18583 2426 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-204ENST00000470951 F8P00451 2351 aa7.75□□□□□ -1.17
SRGAP3-204ENST00000470951 KIAA0087Q14695 138 aa7.75□□□□□ -1.17
SRGAP3-204ENST00000470951 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
SRGAP3-204ENST00000470951 WNK1Q9H4A3 2382 aa7.75□□□□□ -1.17
SRGAP3-204ENST00000470951 DAD1P61803 113 aa7.75□□□□□ -1.17
SRGAP3-204ENST00000470951 TEP1Q99973 2627 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-204ENST00000470951 MIFP14174 115 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 PRR3P79522 188 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 CXCL6P80162 114 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 LINC00612Q8N6U2 182 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 SNURFQ9Y675 71 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 LINC01547P58512 204 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 C9orf66Q5T8R8 295 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
SRGAP3-204ENST00000470951 MTORP42345 2549 aa7.73□□□□□ -1.17
SRGAP3-204ENST00000470951 SPATA3Q8NHX4 192 aa7.73□□□□□ -1.17
SRGAP3-204ENST00000470951 SMR3AQ99954 134 aa7.73□□□□□ -1.17
SRGAP3-204ENST00000470951 Q1T7F1 81 aa7.72□□□□□ -1.17
SRGAP3-204ENST00000470951 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
SRGAP3-204ENST00000470951 IGLV1-51P01701 117 aa7.72□□□□□ -1.17
SRGAP3-204ENST00000470951 RNASE1P07998 156 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-204ENST00000470951 Q6ZVQ6 151 aa7.72□□□□□ -1.17
SRGAP3-204ENST00000470951 Q75L30 129 aa7.71□□□□□ -1.18
SRGAP3-204ENST00000470951 PRO0255Q9UI72 69 aa7.7□□□□□ -1.18
SRGAP3-204ENST00000470951 MXRA5Q9NR99 2828 aa7.7□□□□□ -1.18
SRGAP3-204ENST00000470951 ERC2-IT1O76042 136 aa7.7□□□□□ -1.18
SRGAP3-204ENST00000470951 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
SRGAP3-204ENST00000470951 WFDC10AQ9H1F0 79 aa7.7□□□□□ -1.18
SRGAP3-204ENST00000470951 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
SRGAP3-204ENST00000470951 DEFB130BP0DP73 79 aa7.69□□□□□ -1.18
SRGAP3-204ENST00000470951 DEFB130AP0DP74 79 aa7.69□□□□□ -1.18
SRGAP3-204ENST00000470951 APOC4P55056 127 aa7.69□□□□□ -1.18
SRGAP3-204ENST00000470951 HAMPP81172 84 aa7.69□□□□□ -1.18
SRGAP3-204ENST00000470951 CLPSL2Q6UWE3 100 aa7.69□□□□□ -1.18
SRGAP3-204ENST00000470951 DNAJC9-AS1A6NH13 148 aa7.68□□□□□ -1.18
SRGAP3-204ENST00000470951 KRTAP1-1Q07627 177 aa7.68□□□□□ -1.18
SRGAP3-204ENST00000470951 LINC00269Q8N2A0 174 aa7.68□□□□□ -1.18
SRGAP3-204ENST00000470951 HIVEP2P31629 2446 aa7.68□□□□□ -1.18
SRGAP3-204ENST00000470951 Q8NDZ9 215 aa7.67□□□□□ -1.18
SRGAP3-204ENST00000470951 A0A0J9YWU9 116 aa7.67□□□□□ -1.18
SRGAP3-204ENST00000470951 IGHV4-30-4P0DP06 118 aa7.67□□□□□ -1.18
SRGAP3-204ENST00000470951 REG3AQ06141 175 aa7.67□□□□□ -1.18
SRGAP3-204ENST00000470951 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
SRGAP3-204ENST00000470951 LINC00588Q9Y4M8 146 aa7.67□□□□□ -1.18
SRGAP3-204ENST00000470951 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-204ENST00000470951 Q6ZQY7 126 aa7.66□□□□□ -1.18
SRGAP3-204ENST00000470951 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
SRGAP3-204ENST00000470951 Q6ZTC4 211 aa7.66□□□□□ -1.18
SRGAP3-204ENST00000470951 CUBNO60494 3623 aa7.65□□□□□ -1.18
SRGAP3-204ENST00000470951 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.18
SRGAP3-204ENST00000470951 LYRM9A8MSI8 78 aa7.65□□□□□ -1.18
SRGAP3-204ENST00000470951 Q8N3U1 123 aa7.65□□□□□ -1.18
SRGAP3-204ENST00000470951 M0R2N4 97 aa7.64□□□□□ -1.19
SRGAP3-204ENST00000470951 M0R378 163 aa7.64□□□□□ -1.19
SRGAP3-204ENST00000470951 ANGP03950 147 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms