RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
HDAC6-218ENST00000470942 KRTAP1-4P0C5Y4 121 aa9.43□□□□□ -0.9
HDAC6-218ENST00000470942 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
HDAC6-218ENST00000470942 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
HDAC6-218ENST00000470942 PLNP26678 52 aa9.42□□□□□ -0.9
HDAC6-218ENST00000470942 UBE2AP49459 152 aa9.42□□□□□ -0.9
HDAC6-218ENST00000470942 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
HDAC6-218ENST00000470942 DPM2O94777 84 aa9.41□□□□□ -0.9
HDAC6-218ENST00000470942 HERV-K104P63124 156 aa9.41□□□□□ -0.9
HDAC6-218ENST00000470942 PMCHL2Q9BQD1 86 aa9.41□□□□□ -0.9
HDAC6-218ENST00000470942 MYMXA0A1B0GTQ4 84 aa9.4□□□□□ -0.9
HDAC6-218ENST00000470942 LEPROTO15243 131 aa9.4□□□□□ -0.9
HDAC6-218ENST00000470942 Q8NDZ9 215 aa9.4□□□□□ -0.9
HDAC6-218ENST00000470942 MAP1LC3CQ9BXW4 147 aa9.4□□□□□ -0.9
HDAC6-218ENST00000470942 HERVK_113P61574 105 aa9.39□□□□□ -0.91
HDAC6-218ENST00000470942 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
HDAC6-218ENST00000470942 LINC00587B1AMM8 73 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BKO60814 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 IGKCP01834 107 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BJP06899 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BOP23527 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BBP33778 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BDP58876 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BCP62807 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST2H2BEQ16778 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-218ENST00000470942 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BHQ93079 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BNQ99877 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 HIST1H2BMQ99879 126 aa9.38□□□□□ -0.91
HDAC6-218ENST00000470942 TMEM238C9JI98 176 aa9.37□□□□□ -0.91
HDAC6-218ENST00000470942 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
HDAC6-218ENST00000470942 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
HDAC6-218ENST00000470942 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
HDAC6-218ENST00000470942 J3QQQ9 107 aa9.36□□□□□ -0.91
HDAC6-218ENST00000470942 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
HDAC6-218ENST00000470942 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
HDAC6-218ENST00000470942 M0R378 163 aa9.35□□□□□ -0.91
HDAC6-218ENST00000470942 PRLHP81277 87 aa9.35□□□□□ -0.91
HDAC6-218ENST00000470942 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
HDAC6-218ENST00000470942 UBR4Q5T4S7 5183 aa9.33□□□□□ -0.92
HDAC6-218ENST00000470942 NCR3O14931 201 aa9.33□□□□□ -0.92
HDAC6-218ENST00000470942 SYS1-DBNDD2H3BUS1 97 aa9.32□□□□□ -0.92
HDAC6-218ENST00000470942 CRYGAP11844 174 aa9.32□□□□□ -0.92
HDAC6-218ENST00000470942 NMUP48645 174 aa9.32□□□□□ -0.92
HDAC6-218ENST00000470942 DAND5Q8N907 189 aa9.32□□□□□ -0.92
HDAC6-218ENST00000470942 A0A087X002 238 aa9.31□□□□□ -0.92
HDAC6-218ENST00000470942 ANAPC11Q9NYG5 84 aa9.31□□□□□ -0.92
HDAC6-218ENST00000470942 LRP2P98164 4655 aa9.29□□□□□ -0.92
HDAC6-218ENST00000470942 IGKV2D-26A0A0A0MRZ7 120 aa9.29□□□□□ -0.92
HDAC6-218ENST00000470942 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
HDAC6-218ENST00000470942 E9PLD3 99 aa9.28□□□□□ -0.92
HDAC6-218ENST00000470942 PRYO14603 147 aa9.28□□□□□ -0.92
HDAC6-218ENST00000470942 PET117Q6UWS5 81 aa9.28□□□□□ -0.92
HDAC6-218ENST00000470942 MIEN1Q9BRT3 115 aa9.28□□□□□ -0.92
HDAC6-218ENST00000470942 HIGD2AQ9BW72 106 aa9.28□□□□□ -0.92
HDAC6-218ENST00000470942 LINC01545Q5VT33 79 aa9.27□□□□□ -0.93
HDAC6-218ENST00000470942 LOC107984156A0A0G2JMH3 177 aa9.26□□□□□ -0.93
HDAC6-218ENST00000470942 TRBV10-3A0A0K0K1G6 114 aa9.26□□□□□ -0.93
HDAC6-218ENST00000470942 FAM229BQ4G0N7 80 aa9.26□□□□□ -0.93
HDAC6-218ENST00000470942 ARL17AQ8IVW1 177 aa9.26□□□□□ -0.93
HDAC6-218ENST00000470942 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
HDAC6-218ENST00000470942 TSPAN13O95857 204 aa9.25□□□□□ -0.93
HDAC6-218ENST00000470942 C3orf79P0CE67 100 aa9.25□□□□□ -0.93
HDAC6-218ENST00000470942 S100A12P80511 92 aa9.25□□□□□ -0.93
HDAC6-218ENST00000470942 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
HDAC6-218ENST00000470942 NPC2P61916 151 aa9.24□□□□□ -0.93
HDAC6-218ENST00000470942 KRTAP13-2Q52LG2 175 aa9.24□□□□□ -0.93
HDAC6-218ENST00000470942 COA6Q5JTJ3 125 aaKnown RBP9.24□□□□□ -0.93
HDAC6-218ENST00000470942 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
HDAC6-218ENST00000470942 DDTP30046 118 aa9.23□□□□□ -0.93
HDAC6-218ENST00000470942 KRTDAPP60985 99 aa9.23□□□□□ -0.93
HDAC6-218ENST00000470942 LINC00337Q8N6G1 96 aa9.23□□□□□ -0.93
HDAC6-218ENST00000470942 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
HDAC6-218ENST00000470942 SPRR1AP35321 89 aa9.22□□□□□ -0.93
HDAC6-218ENST00000470942 ADAMTSL4-AS1Q5T5F5 129 aa9.22□□□□□ -0.93
HDAC6-218ENST00000470942 SPANXB1Q9NS25 103 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-218ENST00000470942 PRR4Q16378 134 aa9.21□□□□□ -0.94
HDAC6-218ENST00000470942 NDUFC2O95298 119 aa9.2□□□□□ -0.94
HDAC6-218ENST00000470942 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
HDAC6-218ENST00000470942 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
HDAC6-218ENST00000470942 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
HDAC6-218ENST00000470942 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-218ENST00000470942 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
HDAC6-218ENST00000470942 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
HDAC6-218ENST00000470942 ZNF706Q9Y5V0 76 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-218ENST00000470942 C20orf202A1L168 122 aa9.18□□□□□ -0.94
HDAC6-218ENST00000470942 EIF4EBP3O60516 100 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-218ENST00000470942 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
HDAC6-218ENST00000470942 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
HDAC6-218ENST00000470942 LPAP08519 4548 aa9.17□□□□□ -0.94
HDAC6-218ENST00000470942 B5MCH6 92 aa9.16□□□□□ -0.94
HDAC6-218ENST00000470942 TIMM17BO60830 172 aa9.16□□□□□ -0.94
HDAC6-218ENST00000470942 S100A1P23297 94 aa9.16□□□□□ -0.94
HDAC6-218ENST00000470942 TTTY13Q9BZ97 58 aa9.16□□□□□ -0.94
HDAC6-218ENST00000470942 IGLV6-57P01721 117 aa9.15□□□□□ -0.94
HDAC6-218ENST00000470942 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
HDAC6-218ENST00000470942 LITAFQ99732 161 aa9.15□□□□□ -0.94
HDAC6-218ENST00000470942 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms