RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 NDUFC2O95298 119 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 COL5A1-AS1Q5SY13 56 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 ARL17AQ8IVW1 177 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 NKAPP1Q8N9T2 125 aa6.31□□□□□ -1.4
CCM2-204ENST00000470837 SOSTDC1Q6X4U4 206 aa6.3□□□□□ -1.4
CCM2-204ENST00000470837 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
CCM2-204ENST00000470837 SNHG12Q9BXW3 62 aa6.3□□□□□ -1.4
CCM2-204ENST00000470837 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
CCM2-204ENST00000470837 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
CCM2-204ENST00000470837 A0A0B4J2C4 111 aa6.29□□□□□ -1.4
CCM2-204ENST00000470837 Q1RN00 199 aa6.29□□□□□ -1.4
CCM2-204ENST00000470837 S100A7L2Q5SY68 101 aa6.29□□□□□ -1.4
CCM2-204ENST00000470837 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
CCM2-204ENST00000470837 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
CCM2-204ENST00000470837 A0A096LNI7 61 aa6.28□□□□□ -1.4
CCM2-204ENST00000470837 NCR3O14931 201 aa6.28□□□□□ -1.4
CCM2-204ENST00000470837 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
CCM2-204ENST00000470837 CFC1P0CG37 223 aa6.28□□□□□ -1.4
CCM2-204ENST00000470837 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
CCM2-204ENST00000470837 LBHQ53QV2 105 aaPredicted RBP6.28□□□□□ -1.4
CCM2-204ENST00000470837 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
CCM2-204ENST00000470837 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
CCM2-204ENST00000470837 TRBV10-2A0A0K0K1G8 114 aa6.27□□□□□ -1.41
CCM2-204ENST00000470837 H7C2G1 150 aa6.27□□□□□ -1.41
CCM2-204ENST00000470837 K7ERJ3 54 aa6.27□□□□□ -1.41
CCM2-204ENST00000470837 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
CCM2-204ENST00000470837 FAM19A5Q7Z5A7 132 aaPredicted RBP6.27□□□□□ -1.41
CCM2-204ENST00000470837 PLA2G2DQ9UNK4 145 aa6.27□□□□□ -1.41
CCM2-204ENST00000470837 A0A1B0GWB2 263 aa6.26□□□□□ -1.41
CCM2-204ENST00000470837 M0R378 163 aa6.26□□□□□ -1.41
CCM2-204ENST00000470837 FUSP35637 526 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCM2-204ENST00000470837 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
CCM2-204ENST00000470837 TMEM126AQ9H061 195 aa6.26□□□□□ -1.41
CCM2-204ENST00000470837 VPREB1P12018 145 aa6.25□□□□□ -1.41
CCM2-204ENST00000470837 PSMB2P49721 201 aa6.25□□□□□ -1.41
CCM2-204ENST00000470837 KRTAP10-2P60368 255 aa6.25□□□□□ -1.41
CCM2-204ENST00000470837 IGKV2-28A0A075B6P5 120 aa6.24□□□□□ -1.41
CCM2-204ENST00000470837 IGKV2D-28P01615 120 aa6.24□□□□□ -1.41
CCM2-204ENST00000470837 COX6CP09669 75 aa6.24□□□□□ -1.41
CCM2-204ENST00000470837 CHTF8P0CG12 524 aa6.24□□□□□ -1.41
CCM2-204ENST00000470837 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
CCM2-204ENST00000470837 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
CCM2-204ENST00000470837 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 FAM168BA1KXE4 195 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 M0QXV9 152 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 SERTAD4-AS1Q5TG53 156 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 LYRM7Q5U5X0 104 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 MRPL55Q7Z7F7 128 aaKnown RBP6.23□□□□□ -1.41
CCM2-204ENST00000470837 LINC00337Q8N6G1 96 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 C22orf24Q9Y442 160 aa6.23□□□□□ -1.41
CCM2-204ENST00000470837 GAGE10A6NGK3 116 aa6.22□□□□□ -1.41
CCM2-204ENST00000470837 SCGB1C2P0DMR2 95 aa6.22□□□□□ -1.41
CCM2-204ENST00000470837 UBE2BP63146 152 aa6.22□□□□□ -1.41
CCM2-204ENST00000470837 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 C9orf118A6NHY6 69 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 H3BUT2 72 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 TSPAN13O95857 204 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 VAMP3Q15836 100 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 Q8NDZ9 215 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
CCM2-204ENST00000470837 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.42
CCM2-204ENST00000470837 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 A0A087WYN8 130 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 TAX1BP3O14907 124 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 SNCGO76070 127 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 IGLV6-57P01721 117 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
CCM2-204ENST00000470837 RPL37AP8A6NKH3 93 aa6.19□□□□□ -1.42
CCM2-204ENST00000470837 FABP2P12104 132 aa6.19□□□□□ -1.42
CCM2-204ENST00000470837 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
CCM2-204ENST00000470837 DIRC1Q969H9 104 aa6.19□□□□□ -1.42
CCM2-204ENST00000470837 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
CCM2-204ENST00000470837 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
CCM2-204ENST00000470837 RPL28P46779 137 aaKnown RBP6.18□□□□□ -1.42
CCM2-204ENST00000470837 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
CCM2-204ENST00000470837 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
CCM2-204ENST00000470837 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 IGLV1-50A0A075B6I6 118 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 A0A1W2PPM0 123 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 PANO1I0J062 215 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 PRYO14603 147 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 ZNF73O43830 326 aaPredicted RBP6.17□□□□□ -1.42
CCM2-204ENST00000470837 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
CCM2-204ENST00000470837 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
CCM2-204ENST00000470837 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
CCM2-204ENST00000470837 H0YGX0 51 aa6.16□□□□□ -1.42
CCM2-204ENST00000470837 TRIAP1O43715 76 aa6.16□□□□□ -1.42
CCM2-204ENST00000470837 C6orf99Q4VX62 202 aa6.16□□□□□ -1.42
CCM2-204ENST00000470837 KCNQ1DNQ9H478 68 aa6.16□□□□□ -1.42
CCM2-204ENST00000470837 HYDINQ4G0P3 5121 aa6.15□□□□□ -1.42
CCM2-204ENST00000470837 SLC25A20O43772 301 aa6.15□□□□□ -1.42
CCM2-204ENST00000470837 REG3GQ6UW15 175 aa6.15□□□□□ -1.42
CCM2-204ENST00000470837 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.42
CCM2-204ENST00000470837 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
CCM2-204ENST00000470837 TRBV7-6A0A0J9YX20 115 aa6.14□□□□□ -1.43
CCM2-204ENST00000470837 COX7BP24311 80 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms