RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 LINC00959A0A1B0GUT2 108 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 A0A1B0GUT8 65 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 TINCRA0A1B0GVN0 87 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 SDHAF1A6NFY7 115 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 COLCA2A8K830 154 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 BCL2P10415 239 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 NKX2-5P52952 324 aaPredicted RBP1.47□□□□□ -2.17
UBXN4-206ENST00000470687 SEC11AP67812 179 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 COX6A2Q02221 97 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 WFDC2Q14508 124 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 Q5BKY6 102 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 LYZL1Q6UWQ5 148 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 OR10D4PQ8NGN7 298 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 FAM213BQ8TBF2 198 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 DIRC1Q969H9 104 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 TMEM191AQ9H0A3 160 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 ST20Q9HBF5 79 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 CDC42SE2Q9NRR3 84 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 GNG13Q9P2W3 67 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 CARHSP1Q9Y2V2 147 aaKnown RBP1.47□□□□□ -2.17
UBXN4-206ENST00000470687 DNAH7Q8WXX0 4024 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 HERC2O95714 4834 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 DYNC2H1Q8NCM8 4307 aaKnown RBP1.46□□□□□ -2.18
UBXN4-206ENST00000470687 A0A0B4J2C4 111 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 C7orf77A4D0Y5 90 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 C8orf87E5RJ46 101 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 F8W036 122 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 G3V3Q6 166 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 COX7A2LO14548 114 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 MGPP08493 103 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 MT1HL1P0DM35 61 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 FCER1GP30273 86 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 FUSP35637 526 aaKnown RBP eCLIP1.46□□□□□ -2.18
UBXN4-206ENST00000470687 POLR2KP53803 58 aaKnown RBP1.46□□□□□ -2.18
UBXN4-206ENST00000470687 MRPS36P82909 103 aaKnown RBP1.46□□□□□ -2.18
UBXN4-206ENST00000470687 TCTE3Q8IZS6 198 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 LINC00526Q96FQ7 95 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 CARD19Q96LW7 228 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 OSTCQ9NRP0 149 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 MRPL35Q9NZE8 188 aaKnown RBP1.46□□□□□ -2.18
UBXN4-206ENST00000470687 NAT8BQ9UHF3 227 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 LAMTOR2Q9Y2Q5 125 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
UBXN4-206ENST00000470687 SRRM2Q9UQ35 2752 aaKnown RBP1.46□□□□□ -2.18
UBXN4-206ENST00000470687 FRAS1Q86XX4 4008 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 TRAV26-2A0A0B4J265 109 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 TRBV30A0A0K0K1B3 111 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 A0A1B0GV50 99 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 A6NED7 52 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 A8MUU9 505 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 H3BQ85 93 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 NDUFA1O15239 70 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 MT-ND6P03923 174 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 XCL1P47992 114 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 KRTAP10-10P60014 251 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 PEA15Q15121 130 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 IGFL1Q6UW32 110 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 FAM19A3Q7Z5A8 133 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 COMMD7Q86VX2 200 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 C1orf64Q8NEQ6 169 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 NUP35Q8NFH5 326 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 MAP1LC3AQ9H492 121 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 SPANXA1Q9NS26 97 aa1.45□□□□□ -2.18
UBXN4-206ENST00000470687 RYR1P21817 5038 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 TRBV20OR9-2A0A075B6H5 130 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 A0A096LNI7 61 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 TGIF2-C20orf24A0A0A6YYL0 155 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 IGKV2-24A0A0C4DH68 120 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 MUC21A0A0G2JKD1 596 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 MUC21A0A140T8X8 626 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 ZNF727A8MUV8 499 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 HIGD1CA8MV81 97 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 NUPR1O60356 82 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 CKS2P33552 79 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 IFI27P40305 119 aaPredicted RBP1.44□□□□□ -2.18
UBXN4-206ENST00000470687 UBE2D1P51668 147 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 HBBP68871 147 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 HAMPP81172 84 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 MOBPQ13875 183 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 C4orf26Q17RF5 130 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 SFTA2Q6UW10 78 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 ATP5L2Q7Z4Y8 100 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 C2orf88Q9BSF0 95 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 HIGD2AQ9BW72 106 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 TP73-AS1Q9UF72 201 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 UBE2D4Q9Y2X8 147 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 ALMS1Q8TCU4 4167 aa1.44□□□□□ -2.18
UBXN4-206ENST00000470687 TRAV13-1A0A0B4J241 112 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 IGKV3OR2-268A0A0C4DH90 116 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 SMIM27A0A1W2PRY6 76 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 A8MWP4 228 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-206ENST00000470687 SLC25A20O43772 301 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 RPL28P46779 137 aaKnown RBP1.43□□□□□ -2.18
UBXN4-206ENST00000470687 CKS1BP61024 79 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 HERVK_113P63121 156 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 C9orf116Q5BN46 136 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-206ENST00000470687 C1orf137Q5JT78 98 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 C10orf91Q5T1B1 145 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms