RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 PFN2P35080 140 aa7.36□□□□□ -1.23
HLA-C-206ENST00000470363 CXCL5P42830 114 aa7.36□□□□□ -1.23
HLA-C-206ENST00000470363 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
HLA-C-206ENST00000470363 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
HLA-C-206ENST00000470363 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
HLA-C-206ENST00000470363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
HLA-C-206ENST00000470363 HERV-K104P63124 156 aa7.35□□□□□ -1.23
HLA-C-206ENST00000470363 CARD19Q96LW7 228 aa7.35□□□□□ -1.23
HLA-C-206ENST00000470363 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
HLA-C-206ENST00000470363 UBR4Q5T4S7 5183 aa7.34□□□□□ -1.23
HLA-C-206ENST00000470363 PCP4L1A6NKN8 68 aa7.34□□□□□ -1.23
HLA-C-206ENST00000470363 LINC00158P58513 81 aa7.34□□□□□ -1.23
HLA-C-206ENST00000470363 CNBPP62633 177 aaKnown RBP7.34□□□□□ -1.23
HLA-C-206ENST00000470363 CIRBPQ14011 172 aaKnown RBP7.34□□□□□ -1.23
HLA-C-206ENST00000470363 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
HLA-C-206ENST00000470363 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.23
HLA-C-206ENST00000470363 DAND5Q8N907 189 aa7.34□□□□□ -1.23
HLA-C-206ENST00000470363 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
HLA-C-206ENST00000470363 NPC2P61916 151 aa7.33□□□□□ -1.24
HLA-C-206ENST00000470363 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
HLA-C-206ENST00000470363 LITAFQ99732 161 aa7.33□□□□□ -1.24
HLA-C-206ENST00000470363 F8WDY8 70 aa7.32□□□□□ -1.24
HLA-C-206ENST00000470363 RPL37AP61513 92 aaKnown RBP7.32□□□□□ -1.24
HLA-C-206ENST00000470363 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
HLA-C-206ENST00000470363 HIGD1BQ9P298 99 aa7.32□□□□□ -1.24
HLA-C-206ENST00000470363 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
HLA-C-206ENST00000470363 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
HLA-C-206ENST00000470363 TIMM17BO60830 172 aa7.3□□□□□ -1.24
HLA-C-206ENST00000470363 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
HLA-C-206ENST00000470363 DDTP30046 118 aa7.3□□□□□ -1.24
HLA-C-206ENST00000470363 CTAG1AP78358 180 aa7.3□□□□□ -1.24
HLA-C-206ENST00000470363 SRSF9Q13242 221 aaKnown RBP eCLIP7.3□□□□□ -1.24
HLA-C-206ENST00000470363 RNF151Q2KHN1 245 aa7.3□□□□□ -1.24
HLA-C-206ENST00000470363 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
HLA-C-206ENST00000470363 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
HLA-C-206ENST00000470363 GAGE2EQ4V326 116 aa7.29□□□□□ -1.24
HLA-C-206ENST00000470363 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
HLA-C-206ENST00000470363 HIST1H4GQ99525 98 aa7.29□□□□□ -1.24
HLA-C-206ENST00000470363 GAGE2DQ9UEU5 116 aa7.29□□□□□ -1.24
HLA-C-206ENST00000470363 LINC00587B1AMM8 73 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 RPL18AQ02543 176 aaKnown RBP7.28□□□□□ -1.24
HLA-C-206ENST00000470363 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 COX17Q14061 63 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 Q6ZRP5 223 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 SPANXDQ9BXN6 97 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 SND1-IT1Q9HBX3 110 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 XAGE1AQ9HD64 81 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 SPANXB1Q9NS25 103 aaPredicted RBP7.28□□□□□ -1.24
HLA-C-206ENST00000470363 SPANXCQ9NY87 97 aa7.28□□□□□ -1.24
HLA-C-206ENST00000470363 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
HLA-C-206ENST00000470363 NDUFC2-KCTD14E9PQ53 114 aa7.27□□□□□ -1.25
HLA-C-206ENST00000470363 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
HLA-C-206ENST00000470363 A0A087WYN8 130 aa7.26□□□□□ -1.25
HLA-C-206ENST00000470363 LOC107984640A0A0U1RRK4 108 aa7.26□□□□□ -1.25
HLA-C-206ENST00000470363 TLX1NBP0CAT3 122 aa7.26□□□□□ -1.25
HLA-C-206ENST00000470363 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
HLA-C-206ENST00000470363 SPACA4Q8TDM5 124 aa7.26□□□□□ -1.25
HLA-C-206ENST00000470363 A0A096LNI7 61 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 IGKV2-24A0A0C4DH68 120 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 CHTF8P0CG12 524 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 HINT1P49773 126 aaPredicted RBP7.25□□□□□ -1.25
HLA-C-206ENST00000470363 HSD52Q0P140 79 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 TAL2Q16559 108 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 CEND1Q8N111 149 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 PLAC8Q9NZF1 115 aa7.25□□□□□ -1.25
HLA-C-206ENST00000470363 FXYD2P54710 66 aa7.24□□□□□ -1.25
HLA-C-206ENST00000470363 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
HLA-C-206ENST00000470363 PLA2G2DQ9UNK4 145 aa7.24□□□□□ -1.25
HLA-C-206ENST00000470363 TNXBP22105 4242 aa7.23□□□□□ -1.25
HLA-C-206ENST00000470363 A4D1N5 150 aa7.23□□□□□ -1.25
HLA-C-206ENST00000470363 IFITM1P13164 125 aa7.23□□□□□ -1.25
HLA-C-206ENST00000470363 PTTG1IPP53801 180 aa7.23□□□□□ -1.25
HLA-C-206ENST00000470363 Q6ZVH6 145 aa7.23□□□□□ -1.25
HLA-C-206ENST00000470363 Q8NDZ9 215 aa7.23□□□□□ -1.25
HLA-C-206ENST00000470363 FAM168BA1KXE4 195 aa7.22□□□□□ -1.25
HLA-C-206ENST00000470363 PRR3P79522 188 aaKnown RBP7.22□□□□□ -1.25
HLA-C-206ENST00000470363 BATFQ16520 125 aa7.22□□□□□ -1.25
HLA-C-206ENST00000470363 BVES-AS1Q5T3Y7 98 aa7.22□□□□□ -1.25
HLA-C-206ENST00000470363 LRP2P98164 4655 aa7.22□□□□□ -1.25
HLA-C-206ENST00000470363 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
HLA-C-206ENST00000470363 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
HLA-C-206ENST00000470363 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
HLA-C-206ENST00000470363 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
HLA-C-206ENST00000470363 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
HLA-C-206ENST00000470363 M0R143 59 aa7.19□□□□□ -1.26
HLA-C-206ENST00000470363 NCR3O14931 201 aa7.19□□□□□ -1.26
HLA-C-206ENST00000470363 KRTAP7-1Q8IUC3 87 aa7.19□□□□□ -1.26
HLA-C-206ENST00000470363 DPH3Q96FX2 82 aa7.19□□□□□ -1.26
HLA-C-206ENST00000470363 NHP2Q9NX24 153 aaKnown RBP7.19□□□□□ -1.26
HLA-C-206ENST00000470363 VPREB1P12018 145 aa7.18□□□□□ -1.26
HLA-C-206ENST00000470363 FAM19A5Q7Z5A7 132 aaPredicted RBP7.18□□□□□ -1.26
HLA-C-206ENST00000470363 COPS9Q8WXC6 57 aa7.18□□□□□ -1.26
HLA-C-206ENST00000470363 SNHG12Q9BXW3 62 aa7.18□□□□□ -1.26
HLA-C-206ENST00000470363 IGKV2-28A0A075B6P5 120 aa7.17□□□□□ -1.26
HLA-C-206ENST00000470363 K7ERJ3 54 aa7.17□□□□□ -1.26
HLA-C-206ENST00000470363 IGKV2D-28P01615 120 aa7.17□□□□□ -1.26
HLA-C-206ENST00000470363 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
HLA-C-206ENST00000470363 CFC1P0CG37 223 aa7.17□□□□□ -1.26
HLA-C-206ENST00000470363 PKIGQ9Y2B9 76 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms