RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 IGLV5-39A0A0G2JS06 123 aa9.95□□□□□ -0.82
GTF3C2-209ENST00000470115 C20orf202A1L168 122 aa9.95□□□□□ -0.82
GTF3C2-209ENST00000470115 HERVK_113P61574 105 aa9.95□□□□□ -0.82
GTF3C2-209ENST00000470115 HIST1H2BLQ99880 126 aa9.95□□□□□ -0.82
GTF3C2-209ENST00000470115 C22orf24Q9Y442 160 aa9.95□□□□□ -0.82
GTF3C2-209ENST00000470115 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
GTF3C2-209ENST00000470115 H0Y9J4 135 aa9.93□□□□□ -0.82
GTF3C2-209ENST00000470115 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
GTF3C2-209ENST00000470115 LRP2P98164 4655 aa9.92□□□□□ -0.82
GTF3C2-209ENST00000470115 C5orf52A6NGY3 159 aa9.91□□□□□ -0.82
GTF3C2-209ENST00000470115 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
GTF3C2-209ENST00000470115 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
GTF3C2-209ENST00000470115 ZNF625Q96I27 306 aaPredicted RBP9.9□□□□□ -0.82
GTF3C2-209ENST00000470115 LEPROTO15243 131 aa9.88□□□□□ -0.83
GTF3C2-209ENST00000470115 ATOH7Q8N100 152 aa9.88□□□□□ -0.83
GTF3C2-209ENST00000470115 PLEKHB2Q96CS7 222 aa9.88□□□□□ -0.83
GTF3C2-209ENST00000470115 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
GTF3C2-209ENST00000470115 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
GTF3C2-209ENST00000470115 PFN2P35080 140 aa9.87□□□□□ -0.83
GTF3C2-209ENST00000470115 SFTA2Q6UW10 78 aa9.87□□□□□ -0.83
GTF3C2-209ENST00000470115 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
GTF3C2-209ENST00000470115 KRTAP1-4P0C5Y4 121 aa9.86□□□□□ -0.83
GTF3C2-209ENST00000470115 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
GTF3C2-209ENST00000470115 J3QQQ9 107 aa9.85□□□□□ -0.83
GTF3C2-209ENST00000470115 ZNF861PO60384 105 aa9.85□□□□□ -0.83
GTF3C2-209ENST00000470115 AKR1D1P51857 326 aa9.85□□□□□ -0.83
GTF3C2-209ENST00000470115 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
GTF3C2-209ENST00000470115 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
GTF3C2-209ENST00000470115 ERG28Q9UKR5 140 aa9.85□□□□□ -0.83
GTF3C2-209ENST00000470115 MYMXA0A1B0GTQ4 84 aa9.84□□□□□ -0.83
GTF3C2-209ENST00000470115 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
GTF3C2-209ENST00000470115 E9PLD3 99 aa9.84□□□□□ -0.83
GTF3C2-209ENST00000470115 SCGB1D1O95968 90 aa9.84□□□□□ -0.83
GTF3C2-209ENST00000470115 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
GTF3C2-209ENST00000470115 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
GTF3C2-209ENST00000470115 A0A0U1RRA0 63 aa9.83□□□□□ -0.84
GTF3C2-209ENST00000470115 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
GTF3C2-209ENST00000470115 IGLV5-37A0A075B6J1 123 aa9.82□□□□□ -0.84
GTF3C2-209ENST00000470115 LINC00158P58513 81 aa9.82□□□□□ -0.84
GTF3C2-209ENST00000470115 HERV-K104P63124 156 aa9.82□□□□□ -0.84
GTF3C2-209ENST00000470115 BCE1O60756 84 aa9.81□□□□□ -0.84
GTF3C2-209ENST00000470115 NMUP48645 174 aa9.81□□□□□ -0.84
GTF3C2-209ENST00000470115 NKAPP1Q8N9T2 125 aa9.81□□□□□ -0.84
GTF3C2-209ENST00000470115 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
GTF3C2-209ENST00000470115 COX17Q14061 63 aa9.8□□□□□ -0.84
GTF3C2-209ENST00000470115 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
GTF3C2-209ENST00000470115 RPL28P46779 137 aaKnown RBP9.79□□□□□ -0.84
GTF3C2-209ENST00000470115 IGKV2D-26A0A0A0MRZ7 120 aa9.78□□□□□ -0.84
GTF3C2-209ENST00000470115 LINC00587B1AMM8 73 aa9.78□□□□□ -0.84
GTF3C2-209ENST00000470115 ANKRD39Q53RE8 183 aa9.78□□□□□ -0.84
GTF3C2-209ENST00000470115 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
GTF3C2-209ENST00000470115 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
GTF3C2-209ENST00000470115 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
GTF3C2-209ENST00000470115 IGKV2-28A0A075B6P5 120 aa9.76□□□□□ -0.85
GTF3C2-209ENST00000470115 IGKV2D-28P01615 120 aa9.76□□□□□ -0.85
GTF3C2-209ENST00000470115 RNF213Q63HN8 5207 aa9.76□□□□□ -0.85
GTF3C2-209ENST00000470115 VPREB1P12018 145 aa9.75□□□□□ -0.85
GTF3C2-209ENST00000470115 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
GTF3C2-209ENST00000470115 MIR7-3HGQ8N6C7 128 aa9.74□□□□□ -0.85
GTF3C2-209ENST00000470115 A0A0J9YXY3 114 aa9.73□□□□□ -0.85
GTF3C2-209ENST00000470115 UBE2AP49459 152 aa9.73□□□□□ -0.85
GTF3C2-209ENST00000470115 DAND5Q8N907 189 aa9.73□□□□□ -0.85
GTF3C2-209ENST00000470115 Q8NDZ9 215 aa9.73□□□□□ -0.85
GTF3C2-209ENST00000470115 LPAP08519 4548 aa9.73□□□□□ -0.85
GTF3C2-209ENST00000470115 RPL24P83731 157 aaKnown RBP9.72□□□□□ -0.85
GTF3C2-209ENST00000470115 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
GTF3C2-209ENST00000470115 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
GTF3C2-209ENST00000470115 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
GTF3C2-209ENST00000470115 A0A087X002 238 aa9.7□□□□□ -0.86
GTF3C2-209ENST00000470115 TMEM238C9JI98 176 aa9.7□□□□□ -0.86
GTF3C2-209ENST00000470115 NPC2P61916 151 aa9.7□□□□□ -0.86
GTF3C2-209ENST00000470115 JOSD1Q15040 202 aaPredicted RBP9.7□□□□□ -0.86
GTF3C2-209ENST00000470115 MIEN1Q9BRT3 115 aa9.7□□□□□ -0.86
GTF3C2-209ENST00000470115 ANAPC11Q9NYG5 84 aa9.7□□□□□ -0.86
GTF3C2-209ENST00000470115 BOD1L2Q8IYS8 172 aa9.69□□□□□ -0.86
GTF3C2-209ENST00000470115 CRYGAP11844 174 aa9.68□□□□□ -0.86
GTF3C2-209ENST00000470115 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
GTF3C2-209ENST00000470115 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
GTF3C2-209ENST00000470115 PRLHP81277 87 aa9.67□□□□□ -0.86
GTF3C2-209ENST00000470115 FAM19A1Q7Z5A9 133 aa9.67□□□□□ -0.86
GTF3C2-209ENST00000470115 PAM16Q9Y3D7 125 aa9.67□□□□□ -0.86
GTF3C2-209ENST00000470115 M0R378 163 aa9.66□□□□□ -0.86
GTF3C2-209ENST00000470115 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
GTF3C2-209ENST00000470115 TYMSOSQ8TAI1 123 aa9.66□□□□□ -0.86
GTF3C2-209ENST00000470115 TIMM17BO60830 172 aa9.65□□□□□ -0.86
GTF3C2-209ENST00000470115 TSPAN13O95857 204 aa9.65□□□□□ -0.86
GTF3C2-209ENST00000470115 SPATA45Q537H7 98 aa9.65□□□□□ -0.86
GTF3C2-209ENST00000470115 PRR4Q16378 134 aa9.64□□□□□ -0.87
GTF3C2-209ENST00000470115 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
GTF3C2-209ENST00000470115 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
GTF3C2-209ENST00000470115 NCR3O14931 201 aa9.63□□□□□ -0.87
GTF3C2-209ENST00000470115 LITAFQ99732 161 aa9.63□□□□□ -0.87
GTF3C2-209ENST00000470115 FAM229BQ4G0N7 80 aa9.61□□□□□ -0.87
GTF3C2-209ENST00000470115 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
GTF3C2-209ENST00000470115 C14orf144Q96I85 54 aa9.61□□□□□ -0.87
GTF3C2-209ENST00000470115 COX8AP10176 69 aa9.6□□□□□ -0.87
GTF3C2-209ENST00000470115 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
GTF3C2-209ENST00000470115 SPANXDQ9BXN6 97 aa9.59□□□□□ -0.87
GTF3C2-209ENST00000470115 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
GTF3C2-209ENST00000470115 LOC107984156A0A0G2JMH3 177 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms