RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 IFI27L1Q96BM0 104 aa5.48□□□□□ -1.53
SHROOM3-203ENST00000469923 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
SHROOM3-203ENST00000469923 A0A087X002 238 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 LEPROTL1O95214 131 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 PFN2P35080 140 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 KRTDAPP60985 99 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 TMEM170BQ5T4T1 132 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 DIRC1Q969H9 104 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
SHROOM3-203ENST00000469923 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
SHROOM3-203ENST00000469923 H3BRM9 83 aa5.46□□□□□ -1.54
SHROOM3-203ENST00000469923 ZNF861PO60384 105 aa5.46□□□□□ -1.54
SHROOM3-203ENST00000469923 TSPAN13O95857 204 aa5.46□□□□□ -1.54
SHROOM3-203ENST00000469923 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
SHROOM3-203ENST00000469923 A0A0U1RRA0 63 aa5.45□□□□□ -1.54
SHROOM3-203ENST00000469923 TMEM238C9JI98 176 aa5.45□□□□□ -1.54
SHROOM3-203ENST00000469923 H0Y8G0 127 aa5.45□□□□□ -1.54
SHROOM3-203ENST00000469923 CXCL5P42830 114 aa5.45□□□□□ -1.54
SHROOM3-203ENST00000469923 TRAV12-1A0A0B4J245 112 aa5.44□□□□□ -1.54
SHROOM3-203ENST00000469923 SCGB1D1O95968 90 aa5.44□□□□□ -1.54
SHROOM3-203ENST00000469923 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
SHROOM3-203ENST00000469923 PYY3Q5JQD4 70 aa5.44□□□□□ -1.54
SHROOM3-203ENST00000469923 MRPL55Q7Z7F7 128 aaKnown RBP5.44□□□□□ -1.54
SHROOM3-203ENST00000469923 MAP1LC3CQ9BXW4 147 aa5.44□□□□□ -1.54
SHROOM3-203ENST00000469923 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 TMEM223A0PJW6 202 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 SYS1-DBNDD2H3BUS1 97 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 SMIM6P0DI80 62 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 JOSD1Q15040 202 aaPredicted RBP5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 KRTAP13-1Q8IUC0 172 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
SHROOM3-203ENST00000469923 C20orf202A1L168 122 aa5.42□□□□□ -1.54
SHROOM3-203ENST00000469923 BCE1O60756 84 aa5.42□□□□□ -1.54
SHROOM3-203ENST00000469923 VPREB1P12018 145 aa5.42□□□□□ -1.54
SHROOM3-203ENST00000469923 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
SHROOM3-203ENST00000469923 PMCHL2Q9BQD1 86 aa5.42□□□□□ -1.54
SHROOM3-203ENST00000469923 LBHQ53QV2 105 aaPredicted RBP5.41□□□□□ -1.54
SHROOM3-203ENST00000469923 LINC00518Q8N0U6 118 aa5.41□□□□□ -1.54
SHROOM3-203ENST00000469923 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
SHROOM3-203ENST00000469923 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
SHROOM3-203ENST00000469923 IGLV5-37A0A075B6J1 123 aa5.4□□□□□ -1.54
SHROOM3-203ENST00000469923 PRLHP81277 87 aa5.4□□□□□ -1.54
SHROOM3-203ENST00000469923 LINC01545Q5VT33 79 aa5.4□□□□□ -1.54
SHROOM3-203ENST00000469923 C12orf57Q99622 126 aa5.4□□□□□ -1.54
SHROOM3-203ENST00000469923 IGLV1-50A0A075B6I6 118 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 SMIM13P0DJ93 91 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 LINC00158P58513 81 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 PRR4Q16378 134 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 ATOH7Q8N100 152 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 TP73-AS1Q9UF72 201 aa5.39□□□□□ -1.55
SHROOM3-203ENST00000469923 M0R378 163 aa5.38□□□□□ -1.55
SHROOM3-203ENST00000469923 RETNLBQ9BQ08 111 aa5.38□□□□□ -1.55
SHROOM3-203ENST00000469923 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
SHROOM3-203ENST00000469923 DPM2O94777 84 aa5.37□□□□□ -1.55
SHROOM3-203ENST00000469923 COX17Q14061 63 aa5.37□□□□□ -1.55
SHROOM3-203ENST00000469923 C3orf22Q8N5N4 141 aa5.37□□□□□ -1.55
SHROOM3-203ENST00000469923 IGKCP01834 107 aa5.36□□□□□ -1.55
SHROOM3-203ENST00000469923 S100A12P80511 92 aa5.36□□□□□ -1.55
SHROOM3-203ENST00000469923 DAND5Q8N907 189 aa5.36□□□□□ -1.55
SHROOM3-203ENST00000469923 NKAPP1Q8N9T2 125 aa5.36□□□□□ -1.55
SHROOM3-203ENST00000469923 VAMP8Q9BV40 100 aa5.36□□□□□ -1.55
SHROOM3-203ENST00000469923 TMEM126AQ9H061 195 aa5.36□□□□□ -1.55
SHROOM3-203ENST00000469923 LEPROTO15243 131 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 PLNP26678 52 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 RPL28P46779 137 aaKnown RBP5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 UBE2AP49459 152 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 MEIG1Q5JSS6 88 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 PAM16Q9Y3D7 125 aa5.35□□□□□ -1.55
SHROOM3-203ENST00000469923 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
SHROOM3-203ENST00000469923 RPL24P83731 157 aaKnown RBP5.34□□□□□ -1.55
SHROOM3-203ENST00000469923 SPATA45Q537H7 98 aa5.34□□□□□ -1.55
SHROOM3-203ENST00000469923 MIR7-3HGQ8N6C7 128 aa5.34□□□□□ -1.55
SHROOM3-203ENST00000469923 TYMSOSQ8TAI1 123 aa5.34□□□□□ -1.55
SHROOM3-203ENST00000469923 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 J3QQQ9 107 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 NCR3O14931 201 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 CRYGAP11844 174 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 PRO1933Q9H354 126 aa5.33□□□□□ -1.56
SHROOM3-203ENST00000469923 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
SHROOM3-203ENST00000469923 HERV-K104P63124 156 aa5.32□□□□□ -1.56
SHROOM3-203ENST00000469923 PPDPFQ9H3Y8 114 aa5.32□□□□□ -1.56
SHROOM3-203ENST00000469923 HERVK_113P61574 105 aa5.31□□□□□ -1.56
SHROOM3-203ENST00000469923 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
SHROOM3-203ENST00000469923 BOD1L2Q8IYS8 172 aa5.31□□□□□ -1.56
SHROOM3-203ENST00000469923 HIGD2AQ9BW72 106 aa5.31□□□□□ -1.56
SHROOM3-203ENST00000469923 IGKV2D-26A0A0A0MRZ7 120 aa5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 TRBV10-3A0A0K0K1G6 114 aa5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 E9PLD3 99 aa5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 LGALS3P17931 250 aaKnown RBP5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 RPL13AP40429 203 aaKnown RBP5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 NPC2P61916 151 aa5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 SOSTDC1Q6X4U4 206 aa5.3□□□□□ -1.56
SHROOM3-203ENST00000469923 SMCR5Q8TEV8 140 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms