RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 AKR1C3P42330 323 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 HINT1P49773 126 aaPredicted RBP1.94□□□□□ -2.1
GPNMB-207ENST00000468723 CRIP1P50238 77 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 RAB5CP51148 216 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 UBE2G1P62253 170 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 Q5VSD8 79 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 Q6ZRN7 208 aaPredicted RBP1.94□□□□□ -2.1
GPNMB-207ENST00000468723 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 ATP6V0E2Q8NHE4 81 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 FAM213BQ8TBF2 198 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 LINC00467Q9BRT7 94 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 MAP1LC3BQ9GZQ8 125 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 BATF3Q9NR55 127 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 TNFSF18Q9UNG2 199 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 TRAV7A0A075B6U4 112 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 IGKV3OR2-268A0A0C4DH90 116 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 TMEM262E9PQX1 116 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 MGPP08493 103 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 MGST1P10620 155 aaKnown RBP1.93□□□□□ -2.1
GPNMB-207ENST00000468723 ASIPP42127 132 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 RHEBQ15382 184 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 ZNF56Q15929 161 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 Q6Q795 121 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 Q86TA4 180 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 SFT2D1Q8WV19 159 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 AQP10Q96PS8 301 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 TXNDC17Q9BRA2 123 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 PRADC1Q9BSG0 188 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 PSMG3Q9BT73 122 aaPredicted RBP1.93□□□□□ -2.1
GPNMB-207ENST00000468723 TMEM167BQ9NRX6 74 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 FAT1Q14517 4588 aa1.93□□□□□ -2.1
GPNMB-207ENST00000468723 C1orf196B1AJZ1 125 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 H3BNG1 76 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 PFDN1O60925 122 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 NMBP08949 121 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 TPT1P13693 172 aaKnown RBP1.92□□□□□ -2.1
GPNMB-207ENST00000468723 RHOHQ15669 191 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 LELP1Q5T871 98 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 LINC00299Q6ZSB3 139 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 KCNRGQ8N5I3 272 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 Q8N814 137 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 OR10AG1Q8NH19 301 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 BIN3Q9NQY0 253 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 GNG13Q9P2W3 67 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
GPNMB-207ENST00000468723 A0A1B0GVG6 124 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 KANTRA0A1W2PQU2 76 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 A0A1W2PRE2 83 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 IBA57-AS1B1ANH7 110 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 H7C2G1 150 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 FOXA3P55318 350 aaPredicted RBP1.91□□□□□ -2.1
GPNMB-207ENST00000468723 SERF2P84101 59 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 SS18Q15532 418 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 TDRG1Q3Y452 100 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 LCA10Q71F78 164 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 SMIM15Q7Z3B0 74 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 BAGE2Q86Y30 109 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 LENEPQ9Y5L5 61 aa1.91□□□□□ -2.1
GPNMB-207ENST00000468723 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.1
GPNMB-207ENST00000468723 A0A087WX48 190 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 A0A1B0GV72 72 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 TRBV6-4A0A1B0GX49 114 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 A8MWV9 139 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 NDUFC2O95298 119 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 ANGP03950 147 aaKnown RBP1.9□□□□□ -2.11
GPNMB-207ENST00000468723 RPL35P42766 123 aaKnown RBP1.9□□□□□ -2.11
GPNMB-207ENST00000468723 LINC01556Q5JQF7 62 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 LYRM7Q5U5X0 104 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 SPANXN1Q5VSR9 72 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 ENHOQ6UWT2 76 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 C10orf126Q8N4M7 172 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 DPH3Q96FX2 82 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 SCGB3A1Q96QR1 104 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 Q9BRP9 147 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 MED9Q9NWA0 146 aa1.9□□□□□ -2.11
GPNMB-207ENST00000468723 IGHV3-64A0A075B6Q5 118 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.89□□□□□ -2.11
GPNMB-207ENST00000468723 A0A0D9SG52 128 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 IGKV2-29A2NJV5 120 aaPredicted RBP1.89□□□□□ -2.11
GPNMB-207ENST00000468723 CRPP02741 224 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 LINC00694P0DN24 101 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 UBE2D3P61077 147 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 TMEM258P61165 79 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 UBE2D2P62837 147 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 LINC01554Q52M75 96 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 ALKAL2Q6UX46 152 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 KTN1-AS1Q86SY8 53 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 AKAP14Q86UN6 197 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 HIST3H2BBQ8N257 126 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 LINC00269Q8N2A0 174 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 Q8NDZ9 215 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 MBD3L1Q8WWY6 194 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
GPNMB-207ENST00000468723 LINC00526Q96FQ7 95 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 ZFP30Q9Y2G7 519 aa1.89□□□□□ -2.11
GPNMB-207ENST00000468723 TRBV7-3A0A075B6L6 115 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 TRBV6-8A0A0A6YYG3 113 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms