RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 Q6ZR54 194 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 LINC01561Q8N1V8 128 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 CAMK2N2Q96S95 79 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 TP73-AS1Q9UF72 201 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 DNAH17Q9UFH2 4485 aa2.67□□□□□ -1.98
TMEM39A-204ENST00000468545 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 MYMXA0A1B0GTQ4 84 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 COX8AP10176 69 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 PFN2P35080 140 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 LINC00158P58513 81 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 KIAA0087Q14695 138 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 C9orf116Q5BN46 136 aaPredicted RBP2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 SCGB1D4Q6XE38 83 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 C15orf56Q8N910 161 aa2.66□□□□□ -1.98
TMEM39A-204ENST00000468545 KMT2AQ03164 3969 aa2.65□□□□□ -1.98
TMEM39A-204ENST00000468545 A0A087WTM6 91 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 A0A0J9YXY3 114 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 NDUFA1O15239 70 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 RTL8CO15255 209 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 SMIM13P0DJ93 91 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 NPC2P61916 151 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 SYCNQ0VAF6 134 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 C14orf177Q52M58 125 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 Q6ZRN7 208 aaPredicted RBP2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 Q6ZRU5 148 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 BOD1L2Q8IYS8 172 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 Q8IZM0 81 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 UQCR10Q9UDW1 63 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 DNAH11Q96DT5 4516 aa2.65□□□□□ -1.99
TMEM39A-204ENST00000468545 GVQW2A0A096LPI5 108 aaPredicted RBP2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 LRCOL1A6NCL2 159 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 TSTD3H0UI37 97 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 HNRNPA3P51991 378 aaKnown RBP2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 HERV-K104P63124 156 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 SRSF9Q13242 221 aaKnown RBP eCLIP2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 CIRBPQ14011 172 aaKnown RBP2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 LINC01620Q4KN68 170 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 LBHQ53QV2 105 aaPredicted RBP2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 Q8N814 137 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 DAND5Q8N907 189 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 DPH3Q96FX2 82 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 C2orf48Q96LS8 159 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 CARD19Q96LW7 228 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 MIEN1Q9BRT3 115 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 C6orf48Q9UBA6 75 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 ERG28Q9UKR5 140 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 RYR2Q92736 4967 aa2.64□□□□□ -1.99
TMEM39A-204ENST00000468545 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 DLEU1O43261 78 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 CXCL5P42830 114 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 CTAG1AP78358 180 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 RPL18AQ02543 176 aaKnown RBP2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 MUSTN1Q8IVN3 82 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 MIR7-3HGQ8N6C7 128 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 HIST1H4GQ99525 98 aa2.63□□□□□ -1.99
TMEM39A-204ENST00000468545 IGLV7-46A0A075B6I9 117 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 TRBV30A0A0K0K1B3 111 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 LINC00587B1AMM8 73 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 F8WDY8 70 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 HINT1P49773 126 aaPredicted RBP2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 BATFQ16520 125 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 SFTA2Q6UW10 78 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 Q6ZRP5 223 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 C2orf91Q6ZV80 131 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 XAGE1AQ9HD64 81 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
TMEM39A-204ENST00000468545 LOC107984640A0A0U1RRK4 108 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 TIMM17BO60830 172 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 DDTP30046 118 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 XGP55808 180 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 PRR3P79522 188 aaKnown RBP2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 KRTAP7-1Q8IUC3 87 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 LINC00308Q8TCZ7 52 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 SND1-IT1Q9HBX3 110 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 HIGD1BQ9P298 99 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 FAT2Q9NYQ8 4349 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 DNAH5Q8TE73 4624 aa2.61□□□□□ -1.99
TMEM39A-204ENST00000468545 FRAS1Q86XX4 4008 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 A0A096LNI7 61 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 NDUFC2-KCTD14E9PQ53 114 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 CHTF8P0CG12 524 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 CNBPP62633 177 aaKnown RBP2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 HSD52Q0P140 79 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 COX17Q14061 63 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 LINC00336Q6ZUF6 198 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 CEND1Q8N111 149 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 C9orf163Q8N9P6 203 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 SPANXDQ9BXN6 97 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 SPANXB1Q9NS25 103 aaPredicted RBP2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 SPANXCQ9NY87 97 aa2.6□□□□□ -1.99
TMEM39A-204ENST00000468545 RYR3Q15413 4870 aa2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 KMT2CQ8NEZ4 4911 aaKnown RBP2.59□□□□□ -1.99
TMEM39A-204ENST00000468545 FAM168BA1KXE4 195 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms